RNA–Protein interactions for RNA: ENST00000507009.5

GYPB-208, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 388 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-208ENST00000507009 MAP3K20Q9NYL2 800 aaKnown RBP6.63□□□□□ -1.35
GYPB-208ENST00000507009 CLEC1BQ9P126 229 aa6.63□□□□□ -1.35
GYPB-208ENST00000507009 TBKBP1A7MCY6 615 aa6.62□□□□□ -1.35
GYPB-208ENST00000507009 LOC730098B7Z3J9 87 aa6.62□□□□□ -1.35
GYPB-208ENST00000507009 CYTH3O43739 400 aa6.62□□□□□ -1.35
GYPB-208ENST00000507009 ATP9AO75110 1047 aa6.62□□□□□ -1.35
GYPB-208ENST00000507009 STAM2O75886 525 aa6.62□□□□□ -1.35
GYPB-208ENST00000507009 PDGFBP01127 241 aaPredicted RBP6.62□□□□□ -1.35
GYPB-208ENST00000507009 STAG3L1P0CL83 205 aa6.62□□□□□ -1.35
GYPB-208ENST00000507009 SCG2P13521 617 aa6.62□□□□□ -1.35
GYPB-208ENST00000507009 ICAM3P32942 547 aa6.62□□□□□ -1.35
GYPB-208ENST00000507009 TECP42680 631 aa6.62□□□□□ -1.35
GYPB-208ENST00000507009 ADAM17P78536 824 aa6.62□□□□□ -1.35
GYPB-208ENST00000507009 GHRHRQ02643 423 aa6.62□□□□□ -1.35
GYPB-208ENST00000507009 SIGLEC14Q08ET2 396 aa6.62□□□□□ -1.35
GYPB-208ENST00000507009 APOBRQ0VD83 1088 aa6.62□□□□□ -1.35
GYPB-208ENST00000507009 CAMK1Q14012 370 aa6.62□□□□□ -1.35
GYPB-208ENST00000507009 WTAPQ15007 396 aa6.62□□□□□ -1.35
GYPB-208ENST00000507009 SEC23AQ15436 765 aa6.62□□□□□ -1.35
GYPB-208ENST00000507009 UBE2SQ16763 222 aa6.62□□□□□ -1.35
GYPB-208ENST00000507009 PLPP4Q5VZY2 271 aa6.62□□□□□ -1.35
GYPB-208ENST00000507009 TAF2Q6P1X5 1199 aa6.62□□□□□ -1.35
GYPB-208ENST00000507009 BMP8AQ7Z5Y6 402 aa6.62□□□□□ -1.35
GYPB-208ENST00000507009 RALYLQ86SE5 291 aaKnown RBP6.62□□□□□ -1.35
GYPB-208ENST00000507009 RTN4RL1Q86UN2 441 aaPredicted RBP6.62□□□□□ -1.35
GYPB-208ENST00000507009 THNSL1Q8IYQ7 743 aa6.62□□□□□ -1.35
GYPB-208ENST00000507009 CMTR2Q8IYT2 770 aaKnown RBP6.62□□□□□ -1.35
GYPB-208ENST00000507009 SAMD3Q8N6K7 520 aa6.62□□□□□ -1.35
GYPB-208ENST00000507009 SMRP1Q8NCR6 262 aa6.62□□□□□ -1.35
GYPB-208ENST00000507009 SEPT1Q8WYJ6 367 aa6.62□□□□□ -1.35
GYPB-208ENST00000507009 P2RX5Q93086 422 aa6.62□□□□□ -1.35
GYPB-208ENST00000507009 MTMR8Q96EF0 704 aa6.62□□□□□ -1.35
GYPB-208ENST00000507009 MYL10Q9BUA6 226 aa6.62□□□□□ -1.35
GYPB-208ENST00000507009 DSCC1Q9BVC3 393 aa6.62□□□□□ -1.35
GYPB-208ENST00000507009 PHF7Q9BWX1 381 aaPredicted RBP6.62□□□□□ -1.35
GYPB-208ENST00000507009 PLVAPQ9BX97 442 aa6.62□□□□□ -1.35
GYPB-208ENST00000507009 RC3H2Q9HBD1 1191 aaKnown RBP6.62□□□□□ -1.35
GYPB-208ENST00000507009 ERAP1Q9NZ08 941 aa6.62□□□□□ -1.35
GYPB-208ENST00000507009 PADI3Q9ULW8 664 aa6.62□□□□□ -1.35
GYPB-208ENST00000507009 TRPV2Q9Y5S1 764 aa6.62□□□□□ -1.35
GYPB-208ENST00000507009 TTC3P53804 2025 aa6.61□□□□□ -1.35
GYPB-208ENST00000507009 GSTTP1A0A1W2PQM5 241 aa6.61□□□□□ -1.35
GYPB-208ENST00000507009 hCG_1642624A0A1W2PR95 340 aa6.61□□□□□ -1.35
GYPB-208ENST00000507009 DENND3A2RUS2 1198 aa6.61□□□□□ -1.35
GYPB-208ENST00000507009 HIP1O00291 1037 aa6.61□□□□□ -1.35
GYPB-208ENST00000507009 EYA4O95677 639 aa6.61□□□□□ -1.35
GYPB-208ENST00000507009 INSRRP14616 1297 aa6.61□□□□□ -1.35
GYPB-208ENST00000507009 KCNA2P16389 499 aa6.61□□□□□ -1.35
GYPB-208ENST00000507009 AVPR2P30518 371 aa6.61□□□□□ -1.35
GYPB-208ENST00000507009 COASYQ13057 564 aa6.61□□□□□ -1.35
GYPB-208ENST00000507009 PTPN21Q16825 1174 aa6.61□□□□□ -1.35
GYPB-208ENST00000507009 MARCH8Q5T0T0 291 aa6.61□□□□□ -1.35
GYPB-208ENST00000507009 IER5Q5VY09 327 aa6.61□□□□□ -1.35
GYPB-208ENST00000507009 PCNX4Q63HM2 1172 aa6.61□□□□□ -1.35
GYPB-208ENST00000507009 TRMT1LQ7Z2T5 733 aaKnown RBP6.61□□□□□ -1.35
GYPB-208ENST00000507009 CATIPQ7Z7H3 387 aa6.61□□□□□ -1.35
GYPB-208ENST00000507009 RAB11FIP4Q86YS3 637 aa6.61□□□□□ -1.35
GYPB-208ENST00000507009 PLEKHM2Q8IWE5 1019 aa6.61□□□□□ -1.35
GYPB-208ENST00000507009 CMTR1Q8N1G2 835 aaKnown RBP6.61□□□□□ -1.35
GYPB-208ENST00000507009 GIMAP8Q8ND71 665 aaPredicted RBP6.61□□□□□ -1.35
GYPB-208ENST00000507009 RRP36Q96EU6 259 aaKnown RBP6.61□□□□□ -1.35
GYPB-208ENST00000507009 NEK1Q96PY6 1258 aa6.61□□□□□ -1.35
GYPB-208ENST00000507009 PRRX2Q99811 253 aa6.61□□□□□ -1.35
GYPB-208ENST00000507009 IL25Q9H293 177 aa6.61□□□□□ -1.35
GYPB-208ENST00000507009 SMARCAD1Q9H4L7 1026 aa6.61□□□□□ -1.35
GYPB-208ENST00000507009 AZI2Q9H6S1 392 aa6.61□□□□□ -1.35
GYPB-208ENST00000507009 RIOX1Q9H6W3 641 aa6.61□□□□□ -1.35
GYPB-208ENST00000507009 ENTPD7Q9NQZ7 604 aa6.61□□□□□ -1.35
GYPB-208ENST00000507009 TMEM260Q9NX78 707 aa6.61□□□□□ -1.35
GYPB-208ENST00000507009 SEC63Q9UGP8 760 aaKnown RBP6.61□□□□□ -1.35
GYPB-208ENST00000507009 CDH22Q9UJ99 828 aa6.61□□□□□ -1.35
GYPB-208ENST00000507009 PCDHB7Q9Y5E2 793 aa6.61□□□□□ -1.35
GYPB-208ENST00000507009 PCDHB12Q9Y5F1 795 aa6.61□□□□□ -1.35
GYPB-208ENST00000507009 FRMPD4Q14CM0 1322 aa6.6□□□□□ -1.35
GYPB-208ENST00000507009 RRN3P2A6NIE6 340 aa6.6□□□□□ -1.35
GYPB-208ENST00000507009 DDX39AO00148 427 aaKnown RBP6.6□□□□□ -1.35
GYPB-208ENST00000507009 MGEA5O60502 916 aa6.6□□□□□ -1.35
GYPB-208ENST00000507009 RNF40O75150 1001 aa6.6□□□□□ -1.35
GYPB-208ENST00000507009 FGF18O76093 207 aa6.6□□□□□ -1.35
GYPB-208ENST00000507009 SRGAP2BP0DMP2 458 aa6.6□□□□□ -1.35
GYPB-208ENST00000507009 FGFR1P11362 822 aa6.6□□□□□ -1.35
GYPB-208ENST00000507009 ITGB5P18084 799 aa6.6□□□□□ -1.35
GYPB-208ENST00000507009 RXRAP19793 462 aa6.6□□□□□ -1.35
GYPB-208ENST00000507009 PBX3P40426 434 aa6.6□□□□□ -1.35
GYPB-208ENST00000507009 NT5C2P49902 561 aa6.6□□□□□ -1.35
GYPB-208ENST00000507009 ERVFC1P60507 584 aa6.6□□□□□ -1.35
GYPB-208ENST00000507009 KRT76Q01546 638 aa6.6□□□□□ -1.35
GYPB-208ENST00000507009 HDAC1Q13547 482 aaPredicted RBP6.6□□□□□ -1.35
GYPB-208ENST00000507009 MTMR1Q13613 665 aa6.6□□□□□ -1.35
GYPB-208ENST00000507009 CBX2Q14781 532 aaPredicted RBP6.6□□□□□ -1.35
GYPB-208ENST00000507009 SART3Q15020 963 aaKnown RBP6.6□□□□□ -1.35
GYPB-208ENST00000507009 PLCB4Q15147 1175 aa6.6□□□□□ -1.35
GYPB-208ENST00000507009 PKN1Q16512 942 aa6.6□□□□□ -1.35
GYPB-208ENST00000507009 NAALADL2Q58DX5 795 aa6.6□□□□□ -1.35
GYPB-208ENST00000507009 FAM102BQ5T8I3 360 aa6.6□□□□□ -1.35
GYPB-208ENST00000507009 NFXL1Q6ZNB6 911 aa6.6□□□□□ -1.35
GYPB-208ENST00000507009 NUDT18Q6ZVK8 323 aa6.6□□□□□ -1.35
GYPB-208ENST00000507009 ASCL5Q7RTU5 278 aa6.6□□□□□ -1.35
GYPB-208ENST00000507009 CHD1LQ86WJ1 897 aa6.6□□□□□ -1.35
GYPB-208ENST00000507009 CCDC82Q8N4S0 544 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms