RNA–Protein interactions for RNA: ENST00000506779.1

TOPBP1-205, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 536 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-205ENST00000506779 CR2P20023 1033 aa4.07□□□□□ -1.76
TOPBP1-205ENST00000506779 ACO1P21399 889 aaKnown RBP4.07□□□□□ -1.76
TOPBP1-205ENST00000506779 EPHA5P54756 1037 aa4.07□□□□□ -1.76
TOPBP1-205ENST00000506779 RASA3Q14644 834 aa4.07□□□□□ -1.76
TOPBP1-205ENST00000506779 HABP4Q5JVS0 413 aaKnown RBP4.07□□□□□ -1.76
TOPBP1-205ENST00000506779 BTBD8Q5XKL5 378 aa4.07□□□□□ -1.76
TOPBP1-205ENST00000506779 MTDHQ86UE4 582 aaKnown RBP4.07□□□□□ -1.76
TOPBP1-205ENST00000506779 CKAP2LQ8IYA6 745 aa4.07□□□□□ -1.76
TOPBP1-205ENST00000506779 FAM89AQ96GI7 184 aa4.07□□□□□ -1.76
TOPBP1-205ENST00000506779 DRC1Q96MC2 740 aa4.07□□□□□ -1.76
TOPBP1-205ENST00000506779 DNAJC2Q99543 621 aaKnown RBP4.07□□□□□ -1.76
TOPBP1-205ENST00000506779 DPYSL5Q9BPU6 564 aa4.07□□□□□ -1.76
TOPBP1-205ENST00000506779 KRTAP2-2Q9BYT5 123 aa4.07□□□□□ -1.76
TOPBP1-205ENST00000506779 ACOT7O00154 380 aa4.06□□□□□ -1.76
TOPBP1-205ENST00000506779 PTPN1P18031 435 aaKnown RBP4.06□□□□□ -1.76
TOPBP1-205ENST00000506779 ETV4P43268 484 aa4.06□□□□□ -1.76
TOPBP1-205ENST00000506779 DBPQ10586 325 aaPredicted RBP4.06□□□□□ -1.76
TOPBP1-205ENST00000506779 TOP3AQ13472 1001 aaPredicted RBP4.06□□□□□ -1.76
TOPBP1-205ENST00000506779 RNF151Q2KHN1 245 aa4.06□□□□□ -1.76
TOPBP1-205ENST00000506779 Q6ZSN1 163 aa4.06□□□□□ -1.76
TOPBP1-205ENST00000506779 POLNQ7Z5Q5 900 aa4.06□□□□□ -1.76
TOPBP1-205ENST00000506779 NLGN4XQ8N0W4 816 aa4.06□□□□□ -1.76
TOPBP1-205ENST00000506779 OSBP2Q969R2 916 aa4.06□□□□□ -1.76
TOPBP1-205ENST00000506779 SCYL1Q96KG9 808 aa4.06□□□□□ -1.76
TOPBP1-205ENST00000506779 HIRIP3Q9BW71 556 aaPredicted RBP4.06□□□□□ -1.76
TOPBP1-205ENST00000506779 PDGFDQ9GZP0 370 aaPredicted RBP4.06□□□□□ -1.76
TOPBP1-205ENST00000506779 SRPK3Q9UPE1 567 aa4.06□□□□□ -1.76
TOPBP1-205ENST00000506779 PRAMEF25A6NGN4 478 aa4.05□□□□□ -1.76
TOPBP1-205ENST00000506779 IKBKBO14920 756 aa4.05□□□□□ -1.76
TOPBP1-205ENST00000506779 IGSF3O75054 1194 aa4.05□□□□□ -1.76
TOPBP1-205ENST00000506779 ADCY8P40145 1251 aa4.05□□□□□ -1.76
TOPBP1-205ENST00000506779 KCNQ1P51787 676 aa4.05□□□□□ -1.76
TOPBP1-205ENST00000506779 FSTL1Q12841 308 aa4.05□□□□□ -1.76
TOPBP1-205ENST00000506779 PAK1Q13153 545 aa4.05□□□□□ -1.76
TOPBP1-205ENST00000506779 GRM7Q14831 915 aa4.05□□□□□ -1.76
TOPBP1-205ENST00000506779 YOD1Q5VVQ6 348 aaPredicted RBP4.05□□□□□ -1.76
TOPBP1-205ENST00000506779 GAREM2Q75VX8 874 aa4.05□□□□□ -1.76
TOPBP1-205ENST00000506779 OTOP2Q7RTS6 562 aa4.05□□□□□ -1.76
TOPBP1-205ENST00000506779 ST13P5Q8NFI4 369 aaPredicted RBP4.05□□□□□ -1.76
TOPBP1-205ENST00000506779 WDR48Q8TAF3 677 aa4.05□□□□□ -1.76
TOPBP1-205ENST00000506779 TRIM55Q9BYV6 548 aa4.05□□□□□ -1.76
TOPBP1-205ENST00000506779 KIAA1683Q9H0B3 1180 aa4.05□□□□□ -1.76
TOPBP1-205ENST00000506779 CATSPERZQ9NTU4 200 aa4.05□□□□□ -1.76
TOPBP1-205ENST00000506779 PUF60Q9UHX1 559 aaKnown RBP4.05□□□□□ -1.76
TOPBP1-205ENST00000506779 FBXO10Q9UK96 956 aa4.05□□□□□ -1.76
TOPBP1-205ENST00000506779 TRAF6Q9Y4K3 522 aa4.05□□□□□ -1.76
TOPBP1-205ENST00000506779 ATP23Q9Y6H3 246 aa4.05□□□□□ -1.76
TOPBP1-205ENST00000506779 SLC30A1Q9Y6M5 507 aa4.05□□□□□ -1.76
TOPBP1-205ENST00000506779 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.04□□□□□ -1.76
TOPBP1-205ENST00000506779 AQP7O14520 342 aa4.04□□□□□ -1.76
TOPBP1-205ENST00000506779 KRT15P19012 456 aa4.04□□□□□ -1.76
TOPBP1-205ENST00000506779 PTGS1P23219 599 aa4.04□□□□□ -1.76
TOPBP1-205ENST00000506779 GJA4P35212 333 aa4.04□□□□□ -1.76
TOPBP1-205ENST00000506779 RPS19P39019 145 aaKnown RBP4.04□□□□□ -1.76
TOPBP1-205ENST00000506779 ST5P78524 1137 aa4.04□□□□□ -1.76
TOPBP1-205ENST00000506779 NOLC1Q14978 699 aaKnown RBP eCLIP4.04□□□□□ -1.76
TOPBP1-205ENST00000506779 GPR19Q15760 415 aa4.04□□□□□ -1.76
TOPBP1-205ENST00000506779 FIGNQ5HY92 759 aa4.04□□□□□ -1.76
TOPBP1-205ENST00000506779 LAIR1Q6GTX8 287 aa4.04□□□□□ -1.76
TOPBP1-205ENST00000506779 ARHGAP36Q6ZRI8 547 aa4.04□□□□□ -1.76
TOPBP1-205ENST00000506779 GRASPQ7Z6J2 395 aaPredicted RBP4.04□□□□□ -1.76
TOPBP1-205ENST00000506779 GPR150Q8NGU9 434 aa4.04□□□□□ -1.76
TOPBP1-205ENST00000506779 SH3RF2Q8TEC5 729 aa4.04□□□□□ -1.76
TOPBP1-205ENST00000506779 IPO9Q96P70 1041 aaKnown RBP4.04□□□□□ -1.76
TOPBP1-205ENST00000506779 PLA2G12BQ9BX93 195 aa4.04□□□□□ -1.76
TOPBP1-205ENST00000506779 OSBPL2Q9H1P3 480 aa4.04□□□□□ -1.76
TOPBP1-205ENST00000506779 INCENPQ9NQS7 918 aa4.04□□□□□ -1.76
TOPBP1-205ENST00000506779 SNTG2Q9NY99 539 aa4.04□□□□□ -1.76
TOPBP1-205ENST00000506779 ASXL2Q76L83 1435 aa4.04□□□□□ -1.76
TOPBP1-205ENST00000506779 ARHGAP6O43182 974 aa4.03□□□□□ -1.76
TOPBP1-205ENST00000506779 ACRV1P26436 265 aa4.03□□□□□ -1.76
TOPBP1-205ENST00000506779 MEOX1P50221 254 aa4.03□□□□□ -1.76
TOPBP1-205ENST00000506779 IL13RA1P78552 427 aa4.03□□□□□ -1.76
TOPBP1-205ENST00000506779 MAMDC2Q7Z304 686 aaPredicted RBP4.03□□□□□ -1.76
TOPBP1-205ENST00000506779 PTRH1Q86Y79 214 aaKnown RBP4.03□□□□□ -1.76
TOPBP1-205ENST00000506779 RTKN2Q8IZC4 609 aa4.03□□□□□ -1.76
TOPBP1-205ENST00000506779 ZNF808Q8N4W9 903 aaPredicted RBP4.03□□□□□ -1.76
TOPBP1-205ENST00000506779 FBXW5Q969U6 566 aa4.03□□□□□ -1.76
TOPBP1-205ENST00000506779 DEPDC7Q96QD5 511 aa4.03□□□□□ -1.76
TOPBP1-205ENST00000506779 CDC6Q99741 560 aa4.03□□□□□ -1.76
TOPBP1-205ENST00000506779 SIRPGQ9P1W8 387 aa4.03□□□□□ -1.76
TOPBP1-205ENST00000506779 REXO2Q9Y3B8 237 aaKnown RBP4.03□□□□□ -1.76
TOPBP1-205ENST00000506779 TCRBV5S4A2TA0A5A2 114 aa4.02□□□□□ -1.77
TOPBP1-205ENST00000506779 FAM221BA6H8Z2 402 aa4.02□□□□□ -1.77
TOPBP1-205ENST00000506779 TMEM191CA6NGB0 347 aa4.02□□□□□ -1.77
TOPBP1-205ENST00000506779 FAM90A27PA6NNH2 459 aa4.02□□□□□ -1.77
TOPBP1-205ENST00000506779 MAN2B1O00754 1011 aa4.02□□□□□ -1.77
TOPBP1-205ENST00000506779 PYGMP11217 842 aa4.02□□□□□ -1.77
TOPBP1-205ENST00000506779 NAT1P18440 290 aa4.02□□□□□ -1.77
TOPBP1-205ENST00000506779 PROZP22891 400 aa4.02□□□□□ -1.77
TOPBP1-205ENST00000506779 MC4RP32245 332 aa4.02□□□□□ -1.77
TOPBP1-205ENST00000506779 MSX2P35548 267 aaPredicted RBP4.02□□□□□ -1.77
TOPBP1-205ENST00000506779 GUCY1A3Q02108 690 aa4.02□□□□□ -1.77
TOPBP1-205ENST00000506779 HHEXQ03014 270 aa4.02□□□□□ -1.77
TOPBP1-205ENST00000506779 RASGRF1Q13972 1273 aa4.02□□□□□ -1.77
TOPBP1-205ENST00000506779 CRY1Q16526 586 aa4.02□□□□□ -1.77
TOPBP1-205ENST00000506779 FAM47CQ5HY64 1035 aa4.02□□□□□ -1.77
TOPBP1-205ENST00000506779 USP30Q70CQ3 517 aa4.02□□□□□ -1.77
TOPBP1-205ENST00000506779 CXXC5Q7LFL8 322 aaKnown RBP4.02□□□□□ -1.77
TOPBP1-205ENST00000506779 FILIP1Q7Z7B0 1213 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms