RNA–Protein interactions for RNA: ENST00000506537.1

PDLIM7-216, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-216ENST00000506537 NRBP2Q9NSY0 501 aa20.48■□□□□ 0.87
PDLIM7-216ENST00000506537 SEPT9Q9UHD8 586 aaPredicted RBP20.48■□□□□ 0.87
PDLIM7-216ENST00000506537 PARNO95453 639 aaKnown RBP20.47■□□□□ 0.87
PDLIM7-216ENST00000506537 PTGDRQ13258 359 aa20.47■□□□□ 0.87
PDLIM7-216ENST00000506537 CTTNQ14247 550 aaKnown RBP20.47■□□□□ 0.87
PDLIM7-216ENST00000506537 PLA2G4FQ68DD2 849 aa20.47■□□□□ 0.87
PDLIM7-216ENST00000506537 LINC01465Q8N7H1 131 aa20.47■□□□□ 0.87
PDLIM7-216ENST00000506537 LRCH3Q96II8 777 aa20.47■□□□□ 0.87
PDLIM7-216ENST00000506537 HSD17B14Q9BPX1 270 aa20.47■□□□□ 0.87
PDLIM7-216ENST00000506537 NIFKQ9BYG3 293 aaKnown RBP20.47■□□□□ 0.87
PDLIM7-216ENST00000506537 FTOQ9C0B1 505 aaKnown RBP eCLIP20.47■□□□□ 0.87
PDLIM7-216ENST00000506537 CEP131Q9UPN4 1083 aa20.47■□□□□ 0.87
PDLIM7-216ENST00000506537 EVPLQ92817 2033 aa20.47■□□□□ 0.87
PDLIM7-216ENST00000506537 SLITRK3O94933 977 aa20.46■□□□□ 0.87
PDLIM7-216ENST00000506537 TECP42680 631 aa20.46■□□□□ 0.87
PDLIM7-216ENST00000506537 MRPS6P82932 125 aaKnown RBP20.46■□□□□ 0.87
PDLIM7-216ENST00000506537 TMEM62Q0P6H9 643 aa20.46■□□□□ 0.87
PDLIM7-216ENST00000506537 RESTQ13127 1097 aa20.46■□□□□ 0.87
PDLIM7-216ENST00000506537 MTERF2Q49AM1 385 aa20.46■□□□□ 0.87
PDLIM7-216ENST00000506537 FAM109BQ6ICB4 259 aaPredicted RBP20.46■□□□□ 0.87
PDLIM7-216ENST00000506537 RSPH3Q86UC2 560 aa20.46■□□□□ 0.87
PDLIM7-216ENST00000506537 KIAA0319LQ8IZA0 1049 aa20.46■□□□□ 0.87
PDLIM7-216ENST00000506537 MTMR6Q9Y217 621 aa20.46■□□□□ 0.87
PDLIM7-216ENST00000506537 CDY2AQ9Y6F7 541 aa20.46■□□□□ 0.87
PDLIM7-216ENST00000506537 ARID2Q68CP9 1835 aa20.46■□□□□ 0.87
PDLIM7-216ENST00000506537 DDX11L8A8MPP1 907 aa20.45■□□□□ 0.86
PDLIM7-216ENST00000506537 CLCN3P51790 818 aa20.45■□□□□ 0.86
PDLIM7-216ENST00000506537 IL17AQ16552 155 aa20.45■□□□□ 0.86
PDLIM7-216ENST00000506537 BRAPQ7Z569 592 aa20.45■□□□□ 0.86
PDLIM7-216ENST00000506537 C4orf19Q8IY42 314 aa20.45■□□□□ 0.86
PDLIM7-216ENST00000506537 PTPRSQ13332 1948 aa20.45■□□□□ 0.86
PDLIM7-216ENST00000506537 ZBTB39O15060 712 aa20.44■□□□□ 0.86
PDLIM7-216ENST00000506537 RPLP2P05387 115 aaKnown RBP20.44■□□□□ 0.86
PDLIM7-216ENST00000506537 FXR2P51116 673 aaKnown RBP eCLIP20.44■□□□□ 0.86
PDLIM7-216ENST00000506537 ATP2C1P98194 919 aaPredicted RBP20.44■□□□□ 0.86
PDLIM7-216ENST00000506537 PLEKHG4Q58EX7 1191 aa20.44■□□□□ 0.86
PDLIM7-216ENST00000506537 CNKSR3Q6P9H4 555 aa20.44■□□□□ 0.86
PDLIM7-216ENST00000506537 LRRC71Q8N4P6 559 aa20.44■□□□□ 0.86
PDLIM7-216ENST00000506537 METTL13Q8N6R0 699 aa20.44■□□□□ 0.86
PDLIM7-216ENST00000506537 ZNF579Q8NAF0 562 aaKnown RBP20.44■□□□□ 0.86
PDLIM7-216ENST00000506537 NEK9Q8TD19 979 aa20.44■□□□□ 0.86
PDLIM7-216ENST00000506537 ZSWIM4Q9H7M6 989 aa20.44■□□□□ 0.86
PDLIM7-216ENST00000506537 TRPV2Q9Y5S1 764 aa20.44■□□□□ 0.86
PDLIM7-216ENST00000506537 LOXHD1Q8IVV2 1947 aa20.43■□□□□ 0.86
PDLIM7-216ENST00000506537 ZBBXA8MT70 800 aa20.43■□□□□ 0.86
PDLIM7-216ENST00000506537 MAGEB2O15479 319 aa20.43■□□□□ 0.86
PDLIM7-216ENST00000506537 STX6O43752 255 aa20.43■□□□□ 0.86
PDLIM7-216ENST00000506537 DKC1O60832 514 aaKnown RBP eCLIP20.43■□□□□ 0.86
PDLIM7-216ENST00000506537 MED24O75448 989 aa20.43■□□□□ 0.86
PDLIM7-216ENST00000506537 LYPLA2O95372 231 aa20.43■□□□□ 0.86
PDLIM7-216ENST00000506537 SPATA31C1P0DKV0 1188 aa20.43■□□□□ 0.86
PDLIM7-216ENST00000506537 GHRP10912 638 aa20.43■□□□□ 0.86
PDLIM7-216ENST00000506537 ACTN1P12814 892 aa20.43■□□□□ 0.86
PDLIM7-216ENST00000506537 YWHABP31946 246 aaKnown RBP20.43■□□□□ 0.86
PDLIM7-216ENST00000506537 NPEPPSP55786 919 aa20.43■□□□□ 0.86
PDLIM7-216ENST00000506537 TBC1D8BQ0IIM8 1120 aa20.43■□□□□ 0.86
PDLIM7-216ENST00000506537 MKRN4PQ13434 485 aaPredicted RBP20.43■□□□□ 0.86
PDLIM7-216ENST00000506537 DRP2Q13474 957 aa20.43■□□□□ 0.86
PDLIM7-216ENST00000506537 LPIN1Q14693 890 aa20.43■□□□□ 0.86
PDLIM7-216ENST00000506537 FBXO47Q5MNV8 452 aa20.43■□□□□ 0.86
PDLIM7-216ENST00000506537 EFCAB12Q6NXP0 572 aa20.43■□□□□ 0.86
PDLIM7-216ENST00000506537 TPH2Q8IWU9 490 aa20.43■□□□□ 0.86
PDLIM7-216ENST00000506537 DBF4BQ8NFT6 615 aa20.43■□□□□ 0.86
PDLIM7-216ENST00000506537 CYP26B1Q9NR63 512 aa20.43■□□□□ 0.86
PDLIM7-216ENST00000506537 CHD9Q3L8U1 2897 aa20.43■□□□□ 0.86
PDLIM7-216ENST00000506537 IGKV6-21A0A0C4DH24 114 aa20.42■□□□□ 0.86
PDLIM7-216ENST00000506537 GRXCR1A8MXD5 290 aa20.42■□□□□ 0.86
PDLIM7-216ENST00000506537 LAD1O00515 517 aa20.42■□□□□ 0.86
PDLIM7-216ENST00000506537 BAIAP3O94812 1187 aa20.42■□□□□ 0.86
PDLIM7-216ENST00000506537 VTNP04004 478 aa20.42■□□□□ 0.86
PDLIM7-216ENST00000506537 PRPHP41219 470 aa20.42■□□□□ 0.86
PDLIM7-216ENST00000506537 TMEM266Q2M3C6 531 aa20.42■□□□□ 0.86
PDLIM7-216ENST00000506537 IER5Q5VY09 327 aa20.42■□□□□ 0.86
PDLIM7-216ENST00000506537 NME8Q8N427 588 aa20.42■□□□□ 0.86
PDLIM7-216ENST00000506537 IGSF22Q8N9C0 903 aa20.42■□□□□ 0.86
PDLIM7-216ENST00000506537 SPRYD3Q8NCJ5 442 aa20.42■□□□□ 0.86
PDLIM7-216ENST00000506537 PPP1R16BQ96T49 567 aa20.42■□□□□ 0.86
PDLIM7-216ENST00000506537 CELF4Q9BZC1 486 aaKnown RBP20.42■□□□□ 0.86
PDLIM7-216ENST00000506537 MTIF3Q9H2K0 278 aaKnown RBP20.42■□□□□ 0.86
PDLIM7-216ENST00000506537 CDHR5Q9HBB8 845 aa20.42■□□□□ 0.86
PDLIM7-216ENST00000506537 KDM3AQ9Y4C1 1321 aa20.42■□□□□ 0.86
PDLIM7-216ENST00000506537 MICAL3Q7RTP6 2002 aa20.42■□□□□ 0.86
PDLIM7-216ENST00000506537 GBF1Q92538 1859 aa20.41■□□□□ 0.86
PDLIM7-216ENST00000506537 HSP90AA1P07900 732 aaKnown RBP20.41■□□□□ 0.86
PDLIM7-216ENST00000506537 WDR5P61964 334 aaKnown RBP20.41■□□□□ 0.86
PDLIM7-216ENST00000506537 FAM173BQ6P4H8 233 aa20.41■□□□□ 0.86
PDLIM7-216ENST00000506537 CATSPER3Q86XQ3 398 aa20.41■□□□□ 0.86
PDLIM7-216ENST00000506537 CEP170P1Q96L14 293 aa20.41■□□□□ 0.86
PDLIM7-216ENST00000506537 AGO3Q9H9G7 860 aaKnown RBP20.41■□□□□ 0.86
PDLIM7-216ENST00000506537 SLC4A7Q9Y6M7 1214 aa20.41■□□□□ 0.86
PDLIM7-216ENST00000506537 PP2D1A8MPX8 630 aa20.4■□□□□ 0.86
PDLIM7-216ENST00000506537 M0QZ92 97 aa20.4■□□□□ 0.86
PDLIM7-216ENST00000506537 GPR32O75388 356 aa20.4■□□□□ 0.86
PDLIM7-216ENST00000506537 MAFO75444 373 aaPredicted RBP20.4■□□□□ 0.86
PDLIM7-216ENST00000506537 SMAD3P84022 425 aaKnown RBP20.4■□□□□ 0.86
PDLIM7-216ENST00000506537 POTEGQ6S5H5 508 aa20.4■□□□□ 0.86
PDLIM7-216ENST00000506537 TMEM40Q8WWA1 233 aa20.4■□□□□ 0.86
PDLIM7-216ENST00000506537 POLR3CQ9BUI4 534 aaPredicted RBP20.4■□□□□ 0.86
PDLIM7-216ENST00000506537 IFIH1Q9BYX4 1025 aaKnown RBP20.4■□□□□ 0.86
PDLIM7-216ENST00000506537 SUGCTQ9HAC7 445 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms