RNA–Protein interactions for RNA: ENST00000506233.5

SCLT1-207, Transcript of sodium channel and clathrin linker 1, humanhuman

TSL 2

Gene SCLT1, Length 3,673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-207ENST00000506233 C6orf15Q6UXA7 325 aaPredicted RBP6.65□□□□□ -1.34
SCLT1-207ENST00000506233 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.65□□□□□ -1.34
SCLT1-207ENST00000506233 AOPEPQ8N6M6 819 aa6.65□□□□□ -1.34
SCLT1-207ENST00000506233 FAM184AQ8NB25 1140 aa6.65□□□□□ -1.34
SCLT1-207ENST00000506233 CHAC2Q8WUX2 184 aa6.65□□□□□ -1.34
SCLT1-207ENST00000506233 STRA6Q9BX79 667 aa6.65□□□□□ -1.34
SCLT1-207ENST00000506233 XPO4Q9C0E2 1151 aaKnown RBP6.65□□□□□ -1.34
SCLT1-207ENST00000506233 CASS4Q9NQ75 786 aa6.65□□□□□ -1.34
SCLT1-207ENST00000506233 MRPS23Q9Y3D9 190 aaKnown RBP6.65□□□□□ -1.34
SCLT1-207ENST00000506233 FRMPD2Q68DX3 1309 aaPredicted RBP6.65□□□□□ -1.34
SCLT1-207ENST00000506233 VCANP13611 3396 aa6.65□□□□□ -1.35
SCLT1-207ENST00000506233 FAM86B1E9PN63 330 aa6.65□□□□□ -1.35
SCLT1-207ENST00000506233 TLR3O15455 904 aaKnown RBP6.65□□□□□ -1.35
SCLT1-207ENST00000506233 FAM86B2P0C5J1 330 aa6.65□□□□□ -1.35
SCLT1-207ENST00000506233 FAM153BP0C7A2 387 aa6.65□□□□□ -1.35
SCLT1-207ENST00000506233 SLFN14P0C7P3 912 aa6.65□□□□□ -1.35
SCLT1-207ENST00000506233 ZNF165P49910 485 aa6.65□□□□□ -1.35
SCLT1-207ENST00000506233 NEK2P51955 445 aa6.65□□□□□ -1.35
SCLT1-207ENST00000506233 ZNF174Q15697 407 aa6.65□□□□□ -1.35
SCLT1-207ENST00000506233 FOXB2Q5VYV0 432 aa6.65□□□□□ -1.35
SCLT1-207ENST00000506233 WDR59Q6PJI9 974 aa6.65□□□□□ -1.35
SCLT1-207ENST00000506233 RALYLQ86SE5 291 aaKnown RBP6.65□□□□□ -1.35
SCLT1-207ENST00000506233 C2CD5Q86YS7 1000 aa6.65□□□□□ -1.35
SCLT1-207ENST00000506233 NLGN2Q8NFZ4 835 aa6.65□□□□□ -1.35
SCLT1-207ENST00000506233 CYP2W1Q8TAV3 490 aa6.65□□□□□ -1.35
SCLT1-207ENST00000506233 KIFC2Q96AC6 838 aa6.65□□□□□ -1.35
SCLT1-207ENST00000506233 CLUHP3Q96NS8 147 aa6.65□□□□□ -1.35
SCLT1-207ENST00000506233 CDH19Q9H159 772 aa6.65□□□□□ -1.35
SCLT1-207ENST00000506233 RNF41Q9H4P4 317 aaPredicted RBP6.65□□□□□ -1.35
SCLT1-207ENST00000506233 RPTORQ8N122 1335 aa6.65□□□□□ -1.35
SCLT1-207ENST00000506233 FZD9O00144 591 aa6.64□□□□□ -1.35
SCLT1-207ENST00000506233 STBD1O95210 358 aa6.64□□□□□ -1.35
SCLT1-207ENST00000506233 TDP2O95551 362 aa6.64□□□□□ -1.35
SCLT1-207ENST00000506233 GIPRP48546 466 aa6.64□□□□□ -1.35
SCLT1-207ENST00000506233 NEK3P51956 506 aa6.64□□□□□ -1.35
SCLT1-207ENST00000506233 LRRFIP1Q32MZ4 808 aaKnown RBP6.64□□□□□ -1.35
SCLT1-207ENST00000506233 PIK3AP1Q6ZUJ8 805 aa6.64□□□□□ -1.35
SCLT1-207ENST00000506233 RPGRQ92834 1020 aaKnown RBP6.64□□□□□ -1.35
SCLT1-207ENST00000506233 NINJ1Q92982 152 aa6.64□□□□□ -1.35
SCLT1-207ENST00000506233 HPS3Q969F9 1004 aa6.64□□□□□ -1.35
SCLT1-207ENST00000506233 E2F7Q96AV8 911 aa6.64□□□□□ -1.35
SCLT1-207ENST00000506233 COA7Q96BR5 231 aa6.64□□□□□ -1.35
SCLT1-207ENST00000506233 WDR18Q9BV38 432 aa6.64□□□□□ -1.35
SCLT1-207ENST00000506233 ADD3Q9UEY8 706 aaKnown RBP6.64□□□□□ -1.35
SCLT1-207ENST00000506233 ATP6V1DQ9Y5K8 247 aa6.64□□□□□ -1.35
SCLT1-207ENST00000506233 PDCD11Q14690 1871 aaKnown RBP6.64□□□□□ -1.35
SCLT1-207ENST00000506233 TRPM7Q96QT4 1865 aa6.64□□□□□ -1.35
SCLT1-207ENST00000506233 EPHB6O15197 1021 aa6.64□□□□□ -1.35
SCLT1-207ENST00000506233 LILRA1O75019 489 aa6.64□□□□□ -1.35
SCLT1-207ENST00000506233 PGRP06401 933 aa6.64□□□□□ -1.35
SCLT1-207ENST00000506233 COPS2P61201 443 aa6.64□□□□□ -1.35
SCLT1-207ENST00000506233 SH3BP2P78314 561 aa6.64□□□□□ -1.35
SCLT1-207ENST00000506233 NBPF9Q3BBW0 867 aa6.64□□□□□ -1.35
SCLT1-207ENST00000506233 RILPL1Q5EBL4 403 aa6.64□□□□□ -1.35
SCLT1-207ENST00000506233 TTI2Q6NXR4 508 aa6.64□□□□□ -1.35
SCLT1-207ENST00000506233 BNC2Q6ZN30 1099 aaPredicted RBP6.64□□□□□ -1.35
SCLT1-207ENST00000506233 TEX11Q8IYF3 940 aa6.64□□□□□ -1.35
SCLT1-207ENST00000506233 BLIDQ8IZY5 108 aa6.64□□□□□ -1.35
SCLT1-207ENST00000506233 LRRC47Q8N1G4 583 aaKnown RBP6.64□□□□□ -1.35
SCLT1-207ENST00000506233 ACER1Q8TDN7 264 aa6.64□□□□□ -1.35
SCLT1-207ENST00000506233 CLEC4DQ8WXI8 215 aa6.64□□□□□ -1.35
SCLT1-207ENST00000506233 MFSD3Q96ES6 412 aa6.64□□□□□ -1.35
SCLT1-207ENST00000506233 BORCS6Q96GS4 357 aa6.64□□□□□ -1.35
SCLT1-207ENST00000506233 TARS2Q9BW92 718 aaKnown RBP6.64□□□□□ -1.35
SCLT1-207ENST00000506233 PHACTR1Q9C0D0 580 aa6.64□□□□□ -1.35
SCLT1-207ENST00000506233 IKZF4Q9H2S9 585 aa6.64□□□□□ -1.35
SCLT1-207ENST00000506233 SEMA6BQ9H3T3 888 aa6.64□□□□□ -1.35
SCLT1-207ENST00000506233 ZFYVE28Q9HCC9 887 aa6.64□□□□□ -1.35
SCLT1-207ENST00000506233 NENFQ9UMX5 172 aa6.64□□□□□ -1.35
SCLT1-207ENST00000506233 CCDC69A6NI79 296 aa6.64□□□□□ -1.35
SCLT1-207ENST00000506233 POTECB2RU33 542 aa6.64□□□□□ -1.35
SCLT1-207ENST00000506233 KLRF2D3W0D1 207 aa6.64□□□□□ -1.35
SCLT1-207ENST00000506233 EEF2P13639 858 aaKnown RBP6.64□□□□□ -1.35
SCLT1-207ENST00000506233 KRT2P35908 639 aa6.64□□□□□ -1.35
SCLT1-207ENST00000506233 DPP8Q6V1X1 898 aaPredicted RBP6.64□□□□□ -1.35
SCLT1-207ENST00000506233 TRMT44Q8IYL2 757 aaKnown RBP6.64□□□□□ -1.35
SCLT1-207ENST00000506233 NUP88Q99567 741 aaPredicted RBP6.64□□□□□ -1.35
SCLT1-207ENST00000506233 TDRD3Q9H7E2 651 aaKnown RBP6.64□□□□□ -1.35
SCLT1-207ENST00000506233 OSGEPQ9NPF4 335 aa6.64□□□□□ -1.35
SCLT1-207ENST00000506233 ADAMTS5Q9UNA0 930 aa6.64□□□□□ -1.35
SCLT1-207ENST00000506233 ZNF541Q9H0D2 1346 aa6.64□□□□□ -1.35
SCLT1-207ENST00000506233 PIP5K1CO60331 668 aa6.63□□□□□ -1.35
SCLT1-207ENST00000506233 GRNP28799 593 aaKnown RBP6.63□□□□□ -1.35
SCLT1-207ENST00000506233 PRPHP41219 470 aa6.63□□□□□ -1.35
SCLT1-207ENST00000506233 NT5C2P49902 561 aa6.63□□□□□ -1.35
SCLT1-207ENST00000506233 SNAP25P60880 206 aa6.63□□□□□ -1.35
SCLT1-207ENST00000506233 PABPC4Q13310 644 aaKnown RBP eCLIP6.63□□□□□ -1.35
SCLT1-207ENST00000506233 POSTNQ15063 836 aa6.63□□□□□ -1.35
SCLT1-207ENST00000506233 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.63□□□□□ -1.35
SCLT1-207ENST00000506233 CHPFQ8IZ52 775 aa6.63□□□□□ -1.35
SCLT1-207ENST00000506233 NACAP1Q9BZK3 213 aa6.63□□□□□ -1.35
SCLT1-207ENST00000506233 FZD1Q9UP38 647 aa6.63□□□□□ -1.35
SCLT1-207ENST00000506233 PLAAQ9Y263 795 aa6.63□□□□□ -1.35
SCLT1-207ENST00000506233 BIN1O00499 593 aa6.63□□□□□ -1.35
SCLT1-207ENST00000506233 WNT10BO00744 389 aa6.63□□□□□ -1.35
SCLT1-207ENST00000506233 DHX15O43143 795 aaKnown RBP6.63□□□□□ -1.35
SCLT1-207ENST00000506233 ADCY3O60266 1144 aa6.63□□□□□ -1.35
SCLT1-207ENST00000506233 CCDC192P0DO97 292 aa6.63□□□□□ -1.35
SCLT1-207ENST00000506233 SLC16A2P36021 539 aa6.63□□□□□ -1.35
SCLT1-207ENST00000506233 ME1P48163 572 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms