RNA–Protein interactions for RNA: ENST00000505957.1

CPNE4-206, Transcript of copine 4, humanhuman

TSL 3

Gene CPNE4, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-206ENST00000505957 PPP6R2O75170 966 aa12.13□□□□□ -0.47
CPNE4-206ENST00000505957 CTSHP09668 335 aa12.13□□□□□ -0.47
CPNE4-206ENST00000505957 KRT2P35908 639 aa12.13□□□□□ -0.47
CPNE4-206ENST00000505957 BMPR1AP36894 532 aa12.13□□□□□ -0.47
CPNE4-206ENST00000505957 NHLH1Q02575 133 aa12.13□□□□□ -0.47
CPNE4-206ENST00000505957 NPY5RQ15761 445 aa12.13□□□□□ -0.47
CPNE4-206ENST00000505957 SMAD2Q15796 467 aaKnown RBP12.13□□□□□ -0.47
CPNE4-206ENST00000505957 GNPTABQ3T906 1256 aa12.13□□□□□ -0.47
CPNE4-206ENST00000505957 RPAINQ86UA6 219 aa12.13□□□□□ -0.47
CPNE4-206ENST00000505957 CMTR1Q8N1G2 835 aaKnown RBP12.13□□□□□ -0.47
CPNE4-206ENST00000505957 FIBCD1Q8N539 461 aa12.13□□□□□ -0.47
CPNE4-206ENST00000505957 DAGLBQ8NCG7 672 aa12.13□□□□□ -0.47
CPNE4-206ENST00000505957 CCDC148Q8NFR7 591 aa12.13□□□□□ -0.47
CPNE4-206ENST00000505957 GPKOWQ92917 476 aaPredicted RBP eCLIP12.13□□□□□ -0.47
CPNE4-206ENST00000505957 TNFRSF25Q93038 417 aa12.13□□□□□ -0.47
CPNE4-206ENST00000505957 PGBD1Q96JS3 809 aa12.13□□□□□ -0.47
CPNE4-206ENST00000505957 FBXL18Q96ME1 805 aa12.13□□□□□ -0.47
CPNE4-206ENST00000505957 INPP4AQ96PE3 977 aaPredicted RBP12.13□□□□□ -0.47
CPNE4-206ENST00000505957 POP1Q99575 1024 aaKnown RBP12.13□□□□□ -0.47
CPNE4-206ENST00000505957 C11orf84Q9BUA3 381 aaPredicted RBP12.13□□□□□ -0.47
CPNE4-206ENST00000505957 OSBPL7Q9BZF2 842 aa12.13□□□□□ -0.47
CPNE4-206ENST00000505957 GZF1Q9H116 711 aaPredicted RBP12.13□□□□□ -0.47
CPNE4-206ENST00000505957 RIOX1Q9H6W3 641 aa12.13□□□□□ -0.47
CPNE4-206ENST00000505957 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.13□□□□□ -0.47
CPNE4-206ENST00000505957 SETD4Q9NVD3 440 aa12.13□□□□□ -0.47
CPNE4-206ENST00000505957 CLDND1Q9NY35 253 aa12.13□□□□□ -0.47
CPNE4-206ENST00000505957 FRMPD4Q14CM0 1322 aa12.12□□□□□ -0.47
CPNE4-206ENST00000505957 GOLGA6L4A6NEF3 574 aa12.12□□□□□ -0.47
CPNE4-206ENST00000505957 SPATA31C2B4DYI2 1134 aa12.12□□□□□ -0.47
CPNE4-206ENST00000505957 RBAK-RBAKDNI3L0D1 243 aa12.12□□□□□ -0.47
CPNE4-206ENST00000505957 CYTH3O43739 400 aa12.12□□□□□ -0.47
CPNE4-206ENST00000505957 BMP15O95972 392 aa12.12□□□□□ -0.47
CPNE4-206ENST00000505957 LINC00271P0C7V0 271 aa12.12□□□□□ -0.47
CPNE4-206ENST00000505957 IRS1P35568 1242 aa12.12□□□□□ -0.47
CPNE4-206ENST00000505957 TRAPPC10P48553 1259 aa12.12□□□□□ -0.47
CPNE4-206ENST00000505957 GNL2Q13823 731 aaKnown RBP12.12□□□□□ -0.47
CPNE4-206ENST00000505957 SLC39A14Q15043 492 aa12.12□□□□□ -0.47
CPNE4-206ENST00000505957 SLC35G1Q2M3R5 365 aa12.12□□□□□ -0.47
CPNE4-206ENST00000505957 ADALQ6DHV7 355 aa12.12□□□□□ -0.47
CPNE4-206ENST00000505957 LRSAM1Q6UWE0 723 aa12.12□□□□□ -0.47
CPNE4-206ENST00000505957 EP400NLQ6ZTU2 488 aa12.12□□□□□ -0.47
CPNE4-206ENST00000505957 CLP1Q92989 425 aaKnown RBP12.12□□□□□ -0.47
CPNE4-206ENST00000505957 MFSD14AQ96MC6 490 aa12.12□□□□□ -0.47
CPNE4-206ENST00000505957 GPR20Q99678 358 aa12.12□□□□□ -0.47
CPNE4-206ENST00000505957 BCAS3Q9H6U6 928 aa12.12□□□□□ -0.47
CPNE4-206ENST00000505957 RC3H2Q9HBD1 1191 aaKnown RBP12.12□□□□□ -0.47
CPNE4-206ENST00000505957 ZNF215Q9UL58 517 aaPredicted RBP12.12□□□□□ -0.47
CPNE4-206ENST00000505957 NRCAMQ92823 1304 aa12.11□□□□□ -0.47
CPNE4-206ENST00000505957 FAM237AA0A1B0GTK4 181 aa12.11□□□□□ -0.47
CPNE4-206ENST00000505957 ESYT2A0FGR8 921 aa12.11□□□□□ -0.47
CPNE4-206ENST00000505957 BTBD18B2RXH4 712 aa12.11□□□□□ -0.47
CPNE4-206ENST00000505957 SPTLC2O15270 562 aa12.11□□□□□ -0.47
CPNE4-206ENST00000505957 CTNNB1P35222 781 aa12.11□□□□□ -0.47
CPNE4-206ENST00000505957 MRPS9P82933 396 aaKnown RBP12.11□□□□□ -0.47
CPNE4-206ENST00000505957 STK38Q15208 465 aa12.11□□□□□ -0.47
CPNE4-206ENST00000505957 PTPAQ15257 358 aa12.11□□□□□ -0.47
CPNE4-206ENST00000505957 HERC4Q5GLZ8 1057 aaPredicted RBP12.11□□□□□ -0.47
CPNE4-206ENST00000505957 TAF2Q6P1X5 1199 aa12.11□□□□□ -0.47
CPNE4-206ENST00000505957 RBM43Q6ZSC3 357 aaKnown RBP12.11□□□□□ -0.47
CPNE4-206ENST00000505957 CYFIP1Q7L576 1253 aa12.11□□□□□ -0.47
CPNE4-206ENST00000505957 FCHSD1Q86WN1 690 aa12.11□□□□□ -0.47
CPNE4-206ENST00000505957 CCDC82Q8N4S0 544 aa12.11□□□□□ -0.47
CPNE4-206ENST00000505957 CCDC12Q8WUD4 166 aaPredicted RBP12.11□□□□□ -0.47
CPNE4-206ENST00000505957 SENP7Q9BQF6 1050 aa12.11□□□□□ -0.47
CPNE4-206ENST00000505957 PLVAPQ9BX97 442 aa12.11□□□□□ -0.47
CPNE4-206ENST00000505957 EHMT1Q9H9B1 1298 aa12.11□□□□□ -0.47
CPNE4-206ENST00000505957 BARHL2Q9NY43 387 aa12.11□□□□□ -0.47
CPNE4-206ENST00000505957 VPS54Q9P1Q0 977 aa12.11□□□□□ -0.47
CPNE4-206ENST00000505957 KCNJ14Q9UNX9 436 aa12.11□□□□□ -0.47
CPNE4-206ENST00000505957 MYH7BA7E2Y1 1941 aa12.11□□□□□ -0.47
CPNE4-206ENST00000505957 PNMA6FA0A0J9YX94 578 aa12.1□□□□□ -0.47
CPNE4-206ENST00000505957 GRM6O15303 877 aa12.1□□□□□ -0.47
CPNE4-206ENST00000505957 MBTPS2O43462 519 aa12.1□□□□□ -0.47
CPNE4-206ENST00000505957 CHRNA1P02708 482 aa12.1□□□□□ -0.47
CPNE4-206ENST00000505957 ARHGAP4P98171 946 aa12.1□□□□□ -0.47
CPNE4-206ENST00000505957 HYAL1Q12794 435 aa12.1□□□□□ -0.47
CPNE4-206ENST00000505957 SEMA3FQ13275 785 aa12.1□□□□□ -0.47
CPNE4-206ENST00000505957 SMAD4Q13485 552 aaKnown RBP12.1□□□□□ -0.47
CPNE4-206ENST00000505957 PPP1R18Q6NYC8 613 aa12.1□□□□□ -0.47
CPNE4-206ENST00000505957 XRRA1Q6P2D8 792 aa12.1□□□□□ -0.47
CPNE4-206ENST00000505957 HFE2Q6ZVN8 426 aa12.1□□□□□ -0.47
CPNE4-206ENST00000505957 HOMER1Q86YM7 354 aa12.1□□□□□ -0.47
CPNE4-206ENST00000505957 BICD2Q8TD16 824 aa12.1□□□□□ -0.47
CPNE4-206ENST00000505957 LMBR1Q8WVP7 490 aa12.1□□□□□ -0.47
CPNE4-206ENST00000505957 ZNF689Q96CS4 500 aaPredicted RBP12.1□□□□□ -0.47
CPNE4-206ENST00000505957 ZFP91Q96JP5 570 aaPredicted RBP12.1□□□□□ -0.47
CPNE4-206ENST00000505957 PIGSQ96S52 555 aa12.1□□□□□ -0.47
CPNE4-206ENST00000505957 PCDHA7Q9UN72 937 aa12.1□□□□□ -0.47
CPNE4-206ENST00000505957 CEP131Q9UPN4 1083 aa12.1□□□□□ -0.47
CPNE4-206ENST00000505957 CLIC4Q9Y696 253 aa12.1□□□□□ -0.47
CPNE4-206ENST00000505957 ADGRA3Q8IWK6 1321 aa12.1□□□□□ -0.47
CPNE4-206ENST00000505957 M0R2N6 131 aa12.09□□□□□ -0.47
CPNE4-206ENST00000505957 STXBP3O00186 592 aa12.09□□□□□ -0.47
CPNE4-206ENST00000505957 ENPP3O14638 875 aa12.09□□□□□ -0.47
CPNE4-206ENST00000505957 LIG1P18858 919 aa12.09□□□□□ -0.47
CPNE4-206ENST00000505957 DLX2Q07687 328 aaPredicted RBP12.09□□□□□ -0.47
CPNE4-206ENST00000505957 MGAT3Q09327 533 aa12.09□□□□□ -0.47
CPNE4-206ENST00000505957 ADAM15Q13444 863 aa12.09□□□□□ -0.47
CPNE4-206ENST00000505957 SF3A1Q15459 793 aaKnown RBP12.09□□□□□ -0.47
CPNE4-206ENST00000505957 NAALADL2Q58DX5 795 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms