RNA–Protein interactions for RNA: ENST00000504651.5

DDR1-253, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-253ENST00000504651 SLC43A3Q8NBI5 491 aa15.58■□□□□ 0.08
DDR1-253ENST00000504651 TRAPPC12Q8WVT3 735 aa15.58■□□□□ 0.08
DDR1-253ENST00000504651 MRPS27Q92552 414 aaKnown RBP15.58■□□□□ 0.08
DDR1-253ENST00000504651 CEP170P1Q96L14 293 aa15.58■□□□□ 0.08
DDR1-253ENST00000504651 SH2D3AQ9BRG2 576 aa15.58■□□□□ 0.08
DDR1-253ENST00000504651 NIFKQ9BYG3 293 aaKnown RBP15.58■□□□□ 0.08
DDR1-253ENST00000504651 CYP26B1Q9NR63 512 aa15.58■□□□□ 0.08
DDR1-253ENST00000504651 DNM3Q9UQ16 869 aa15.58■□□□□ 0.08
DDR1-253ENST00000504651 NOD1Q9Y239 953 aa15.58■□□□□ 0.08
DDR1-253ENST00000504651 A0A087WWV3 80 aa15.57■□□□□ 0.08
DDR1-253ENST00000504651 ARHGEF35A5YM69 484 aa15.57■□□□□ 0.08
DDR1-253ENST00000504651 GOLGA6L22H0YM25 854 aa15.57■□□□□ 0.08
DDR1-253ENST00000504651 ZBTB39O15060 712 aa15.57■□□□□ 0.08
DDR1-253ENST00000504651 TLR3O15455 904 aaKnown RBP15.57■□□□□ 0.08
DDR1-253ENST00000504651 PFKFB1P16118 471 aa15.57■□□□□ 0.08
DDR1-253ENST00000504651 CMA1P23946 247 aa15.57■□□□□ 0.08
DDR1-253ENST00000504651 RARRES1P49788 294 aa15.57■□□□□ 0.08
DDR1-253ENST00000504651 NPEPPSP55786 919 aa15.57■□□□□ 0.08
DDR1-253ENST00000504651 RTP1P59025 263 aa15.57■□□□□ 0.08
DDR1-253ENST00000504651 SNX17Q15036 470 aa15.57■□□□□ 0.08
DDR1-253ENST00000504651 TRIM60Q495X7 471 aa15.57■□□□□ 0.08
DDR1-253ENST00000504651 RRAGBQ5VZM2 374 aa15.57■□□□□ 0.08
DDR1-253ENST00000504651 CCDC73Q6ZRK6 1079 aa15.57■□□□□ 0.08
DDR1-253ENST00000504651 KCTD17Q8N5Z5 321 aa15.57■□□□□ 0.08
DDR1-253ENST00000504651 DHX58Q96C10 678 aa15.57■□□□□ 0.08
DDR1-253ENST00000504651 BHMT2Q9H2M3 363 aa15.57■□□□□ 0.08
DDR1-253ENST00000504651 STK17AQ9UEE5 414 aa15.57■□□□□ 0.08
DDR1-253ENST00000504651 TUBE1Q9UJT0 475 aa15.57■□□□□ 0.08
DDR1-253ENST00000504651 DBR1Q9UK59 544 aaKnown RBP15.57■□□□□ 0.08
DDR1-253ENST00000504651 ATP11BQ9Y2G3 1177 aa15.57■□□□□ 0.08
DDR1-253ENST00000504651 TRIP12Q14669 1992 aaPredicted RBP15.56■□□□□ 0.08
DDR1-253ENST00000504651 A0A087X0B3 334 aa15.56■□□□□ 0.08
DDR1-253ENST00000504651 A0A1B0GVL5 298 aa15.56■□□□□ 0.08
DDR1-253ENST00000504651 ZBTB42B2RXF5 422 aa15.56■□□□□ 0.08
DDR1-253ENST00000504651 B4GALT4O60513 344 aa15.56■□□□□ 0.08
DDR1-253ENST00000504651 PQBP1O60828 265 aaKnown RBP15.56■□□□□ 0.08
DDR1-253ENST00000504651 EYA4O95677 639 aa15.56■□□□□ 0.08
DDR1-253ENST00000504651 SSBP05455 408 aaKnown RBP eCLIP15.56■□□□□ 0.08
DDR1-253ENST00000504651 XRCC6P12956 609 aaKnown RBP eCLIP15.56■□□□□ 0.08
DDR1-253ENST00000504651 HOXC8P31273 242 aa15.56■□□□□ 0.08
DDR1-253ENST00000504651 CDK7P50613 346 aa15.56■□□□□ 0.08
DDR1-253ENST00000504651 POLGP54098 1239 aaPredicted RBP15.56■□□□□ 0.08
DDR1-253ENST00000504651 TBC1D8BQ0IIM8 1120 aa15.56■□□□□ 0.08
DDR1-253ENST00000504651 TARBP2Q15633 366 aaKnown RBP15.56■□□□□ 0.08
DDR1-253ENST00000504651 PTGISQ16647 500 aa15.56■□□□□ 0.08
DDR1-253ENST00000504651 LRRC26Q2I0M4 334 aa15.56■□□□□ 0.08
DDR1-253ENST00000504651 C1orf53Q5VUE5 145 aa15.56■□□□□ 0.08
DDR1-253ENST00000504651 FAM126BQ8IXS8 530 aa15.56■□□□□ 0.08
DDR1-253ENST00000504651 LARP4BQ92615 738 aaKnown RBP15.56■□□□□ 0.08
DDR1-253ENST00000504651 RAD54LQ92698 747 aa15.56■□□□□ 0.08
DDR1-253ENST00000504651 PYM1Q9BRP8 204 aaKnown RBP15.56■□□□□ 0.08
DDR1-253ENST00000504651 PANK2Q9BZ23 570 aa15.56■□□□□ 0.08
DDR1-253ENST00000504651 BMP2KQ9NSY1 1161 aaPredicted RBP15.56■□□□□ 0.08
DDR1-253ENST00000504651 KCNH3Q9ULD8 1083 aa15.56■□□□□ 0.08
DDR1-253ENST00000504651 PPME1Q9Y570 386 aa15.56■□□□□ 0.08
DDR1-253ENST00000504651 POLR2DO15514 142 aaKnown RBP15.55■□□□□ 0.08
DDR1-253ENST00000504651 TREHO43280 583 aa15.55■□□□□ 0.08
DDR1-253ENST00000504651 USO1O60763 962 aaKnown RBP15.55■□□□□ 0.08
DDR1-253ENST00000504651 GADD45BO75293 160 aaPredicted RBP15.55■□□□□ 0.08
DDR1-253ENST00000504651 PRPF40AO75400 957 aaKnown RBP15.55■□□□□ 0.08
DDR1-253ENST00000504651 C22orf31O95567 290 aa15.55■□□□□ 0.08
DDR1-253ENST00000504651 RFC5P40937 340 aa15.55■□□□□ 0.08
DDR1-253ENST00000504651 ADAM17P78536 824 aa15.55■□□□□ 0.08
DDR1-253ENST00000504651 ZNF200P98182 395 aaPredicted RBP15.55■□□□□ 0.08
DDR1-253ENST00000504651 HIC1Q14526 733 aa15.55■□□□□ 0.08
DDR1-253ENST00000504651 MTHFD1LQ6UB35 978 aa15.55■□□□□ 0.08
DDR1-253ENST00000504651 LRRC15Q8TF66 581 aa15.55■□□□□ 0.08
DDR1-253ENST00000504651 SLC7A3Q8WY07 619 aa15.55■□□□□ 0.08
DDR1-253ENST00000504651 ZBTB10Q96DT7 871 aa15.55■□□□□ 0.08
DDR1-253ENST00000504651 GOLPH3LQ9H4A5 285 aa15.55■□□□□ 0.08
DDR1-253ENST00000504651 BLOC1S4Q9NUP1 217 aa15.55■□□□□ 0.08
DDR1-253ENST00000504651 TRMT13Q9NUP7 481 aaKnown RBP15.55■□□□□ 0.08
DDR1-253ENST00000504651 HPSEQ9Y251 543 aa15.55■□□□□ 0.08
DDR1-253ENST00000504651 TANC1Q9C0D5 1861 aa15.54■□□□□ 0.08
DDR1-253ENST00000504651 BRCA2P51587 3418 aa15.54■□□□□ 0.08
DDR1-253ENST00000504651 MBLAC1A4D2B0 266 aaPredicted RBP15.54■□□□□ 0.08
DDR1-253ENST00000504651 DCDC2CA8MYV0 355 aa15.54■□□□□ 0.08
DDR1-253ENST00000504651 MAGEB2O15479 319 aa15.54■□□□□ 0.08
DDR1-253ENST00000504651 PLA2G4BP0C869 781 aa15.54■□□□□ 0.08
DDR1-253ENST00000504651 CYP2C9P11712 490 aa15.54■□□□□ 0.08
DDR1-253ENST00000504651 KLRC1P26715 233 aa15.54■□□□□ 0.08
DDR1-253ENST00000504651 SYKP43405 635 aa15.54■□□□□ 0.08
DDR1-253ENST00000504651 NDUFA8P51970 172 aa15.54■□□□□ 0.08
DDR1-253ENST00000504651 UBE2HP62256 183 aa15.54■□□□□ 0.08
DDR1-253ENST00000504651 DHX8Q14562 1220 aaKnown RBP15.54■□□□□ 0.08
DDR1-253ENST00000504651 MCM6Q14566 821 aa15.54■□□□□ 0.08
DDR1-253ENST00000504651 EMC2Q15006 297 aa15.54■□□□□ 0.08
DDR1-253ENST00000504651 MARCH8Q5T0T0 291 aa15.54■□□□□ 0.08
DDR1-253ENST00000504651 ANKRD33Q7Z3H0 272 aa15.54■□□□□ 0.08
DDR1-253ENST00000504651 IQUBQ8NA54 791 aa15.54■□□□□ 0.08
DDR1-253ENST00000504651 RETREG2Q8NC44 543 aa15.54■□□□□ 0.08
DDR1-253ENST00000504651 MTRQ99707 1265 aa15.54■□□□□ 0.08
DDR1-253ENST00000504651 JPH2Q9BR39 696 aaPredicted RBP15.54■□□□□ 0.08
DDR1-253ENST00000504651 HTATIP2Q9BUP3 242 aa15.54■□□□□ 0.08
DDR1-253ENST00000504651 TRPV6Q9H1D0 765 aa15.54■□□□□ 0.08
DDR1-253ENST00000504651 ATP6V0A4Q9HBG4 840 aa15.54■□□□□ 0.08
DDR1-253ENST00000504651 FAM237AA0A1B0GTK4 181 aa15.53■□□□□ 0.08
DDR1-253ENST00000504651 DGAT1O75907 488 aa15.53■□□□□ 0.08
DDR1-253ENST00000504651 TLE2Q04725 743 aa15.53■□□□□ 0.08
DDR1-253ENST00000504651 E2F4Q16254 413 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms