RNA–Protein interactions for RNA: ENST00000504554.1

RFC1-207, Transcript of replication factor C subunit 1, humanhuman

TSL 4

Gene RFC1, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-207ENST00000504554 PCDHA4Q9UN74 947 aa9.11□□□□□ -0.95
RFC1-207ENST00000504554 NOD1Q9Y239 953 aa9.11□□□□□ -0.95
RFC1-207ENST00000504554 NFASCO94856 1347 aa9.1□□□□□ -0.95
RFC1-207ENST00000504554 IGKV6D-21A0A0A0MT36 114 aa9.1□□□□□ -0.95
RFC1-207ENST00000504554 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.1□□□□□ -0.95
RFC1-207ENST00000504554 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.1□□□□□ -0.95
RFC1-207ENST00000504554 ATG7O95352 703 aa9.1□□□□□ -0.95
RFC1-207ENST00000504554 CXCL10P02778 98 aa9.1□□□□□ -0.95
RFC1-207ENST00000504554 MYOGP15173 224 aa9.1□□□□□ -0.95
RFC1-207ENST00000504554 SELPP16109 830 aa9.1□□□□□ -0.95
RFC1-207ENST00000504554 ATP4AP20648 1035 aa9.1□□□□□ -0.95
RFC1-207ENST00000504554 CIITAP33076 1130 aa9.1□□□□□ -0.95
RFC1-207ENST00000504554 ZNF76P36508 570 aa9.1□□□□□ -0.95
RFC1-207ENST00000504554 RABGGTBP53611 331 aa9.1□□□□□ -0.95
RFC1-207ENST00000504554 BFSP2Q13515 415 aa9.1□□□□□ -0.95
RFC1-207ENST00000504554 PUS10Q3MIT2 529 aaKnown RBP9.1□□□□□ -0.95
RFC1-207ENST00000504554 PRR16Q569H4 304 aa9.1□□□□□ -0.95
RFC1-207ENST00000504554 PLA2G2CQ5R387 149 aa9.1□□□□□ -0.95
RFC1-207ENST00000504554 ABHD15Q6UXT9 468 aa9.1□□□□□ -0.95
RFC1-207ENST00000504554 LRRC8DQ7L1W4 858 aa9.1□□□□□ -0.95
RFC1-207ENST00000504554 NIPA1Q7RTP0 329 aa9.1□□□□□ -0.95
RFC1-207ENST00000504554 SCUBE3Q8IX30 993 aa9.1□□□□□ -0.95
RFC1-207ENST00000504554 TRIM22Q8IYM9 498 aa9.1□□□□□ -0.95
RFC1-207ENST00000504554 BLIDQ8IZY5 108 aa9.1□□□□□ -0.95
RFC1-207ENST00000504554 RETREG2Q8NC44 543 aa9.1□□□□□ -0.95
RFC1-207ENST00000504554 DAGLBQ8NCG7 672 aa9.1□□□□□ -0.95
RFC1-207ENST00000504554 GIMAP8Q8ND71 665 aaPredicted RBP9.1□□□□□ -0.95
RFC1-207ENST00000504554 NSUN7Q8NE18 718 aaKnown RBP9.1□□□□□ -0.95
RFC1-207ENST00000504554 CCDC148Q8NFR7 591 aa9.1□□□□□ -0.95
RFC1-207ENST00000504554 CAGE1Q8TC20 777 aa9.1□□□□□ -0.95
RFC1-207ENST00000504554 TBCKQ8TEA7 893 aa9.1□□□□□ -0.95
RFC1-207ENST00000504554 AFAP1L1Q8TED9 768 aa9.1□□□□□ -0.95
RFC1-207ENST00000504554 CCDC12Q8WUD4 166 aaPredicted RBP9.1□□□□□ -0.95
RFC1-207ENST00000504554 ATP6V0A1Q93050 837 aa9.1□□□□□ -0.95
RFC1-207ENST00000504554 PHF20Q9BVI0 1012 aa9.1□□□□□ -0.95
RFC1-207ENST00000504554 PBX4Q9BYU1 374 aa9.1□□□□□ -0.95
RFC1-207ENST00000504554 SEMA6BQ9H3T3 888 aa9.1□□□□□ -0.95
RFC1-207ENST00000504554 YBX2Q9Y2T7 364 aaKnown RBP9.1□□□□□ -0.95
RFC1-207ENST00000504554 MYH7BA7E2Y1 1941 aa9.09□□□□□ -0.95
RFC1-207ENST00000504554 EMSYQ7Z589 1322 aa9.09□□□□□ -0.95
RFC1-207ENST00000504554 STK36Q9NRP7 1315 aa9.09□□□□□ -0.95
RFC1-207ENST00000504554 MSH4O15457 936 aa9.09□□□□□ -0.95
RFC1-207ENST00000504554 LILRB3O75022 631 aa9.09□□□□□ -0.95
RFC1-207ENST00000504554 ARHGEF15O94989 841 aa9.09□□□□□ -0.95
RFC1-207ENST00000504554 TDP2O95551 362 aa9.09□□□□□ -0.95
RFC1-207ENST00000504554 PLCB4Q15147 1175 aa9.09□□□□□ -0.95
RFC1-207ENST00000504554 ANKRD1Q15327 319 aa9.09□□□□□ -0.95
RFC1-207ENST00000504554 ZNF787Q6DD87 383 aa9.09□□□□□ -0.95
RFC1-207ENST00000504554 TMCO2Q7Z6W1 182 aaPredicted RBP9.09□□□□□ -0.95
RFC1-207ENST00000504554 CCDC60Q8IWA6 550 aaPredicted RBP9.09□□□□□ -0.95
RFC1-207ENST00000504554 RPUSD2Q8IZ73 545 aaKnown RBP9.09□□□□□ -0.95
RFC1-207ENST00000504554 BICD2Q8TD16 824 aa9.09□□□□□ -0.95
RFC1-207ENST00000504554 TRAPPC12Q8WVT3 735 aa9.09□□□□□ -0.95
RFC1-207ENST00000504554 SDF4Q9BRK5 362 aa9.09□□□□□ -0.95
RFC1-207ENST00000504554 ZNF577Q9BSK1 485 aa9.09□□□□□ -0.95
RFC1-207ENST00000504554 SLC6A16Q9GZN6 736 aa9.09□□□□□ -0.95
RFC1-207ENST00000504554 SCN5AQ14524 2016 aa9.09□□□□□ -0.95
RFC1-207ENST00000504554 MBLAC1A4D2B0 266 aaPredicted RBP9.08□□□□□ -0.96
RFC1-207ENST00000504554 ZBBXA8MT70 800 aa9.08□□□□□ -0.96
RFC1-207ENST00000504554 ZBTB42B2RXF5 422 aa9.08□□□□□ -0.96
RFC1-207ENST00000504554 IPO5O00410 1097 aaKnown RBP9.08□□□□□ -0.96
RFC1-207ENST00000504554 WNT7AO00755 349 aa9.08□□□□□ -0.96
RFC1-207ENST00000504554 SLC37A4O43826 429 aa9.08□□□□□ -0.96
RFC1-207ENST00000504554 TRAK2O60296 914 aa9.08□□□□□ -0.96
RFC1-207ENST00000504554 CTSHP09668 335 aa9.08□□□□□ -0.96
RFC1-207ENST00000504554 INSRRP14616 1297 aa9.08□□□□□ -0.96
RFC1-207ENST00000504554 RFC2P35250 354 aa9.08□□□□□ -0.96
RFC1-207ENST00000504554 THPOP40225 353 aa9.08□□□□□ -0.96
RFC1-207ENST00000504554 IGBP1P78318 339 aa9.08□□□□□ -0.96
RFC1-207ENST00000504554 DEFB103AP81534 67 aa9.08□□□□□ -0.96
RFC1-207ENST00000504554 PRR20EP86478 221 aa9.08□□□□□ -0.96
RFC1-207ENST00000504554 PRR20CP86479 221 aa9.08□□□□□ -0.96
RFC1-207ENST00000504554 PRR20DP86480 221 aa9.08□□□□□ -0.96
RFC1-207ENST00000504554 PRR20BP86481 221 aa9.08□□□□□ -0.96
RFC1-207ENST00000504554 PRR20AP86496 221 aa9.08□□□□□ -0.96
RFC1-207ENST00000504554 MGAT3Q09327 533 aa9.08□□□□□ -0.96
RFC1-207ENST00000504554 PPFIA1Q13136 1202 aa9.08□□□□□ -0.96
RFC1-207ENST00000504554 GRIN2CQ14957 1233 aa9.08□□□□□ -0.96
RFC1-207ENST00000504554 GRIK4Q16099 956 aa9.08□□□□□ -0.96
RFC1-207ENST00000504554 INF2Q27J81 1249 aa9.08□□□□□ -0.96
RFC1-207ENST00000504554 ZNF697Q5TEC3 545 aa9.08□□□□□ -0.96
RFC1-207ENST00000504554 CPLX2Q6PUV4 134 aaKnown RBP9.08□□□□□ -0.96
RFC1-207ENST00000504554 GLG1Q92896 1179 aa9.08□□□□□ -0.96
RFC1-207ENST00000504554 TNFRSF25Q93038 417 aa9.08□□□□□ -0.96
RFC1-207ENST00000504554 MBOAT7Q96N66 472 aa9.08□□□□□ -0.96
RFC1-207ENST00000504554 CDX2Q99626 313 aaPredicted RBP9.08□□□□□ -0.96
RFC1-207ENST00000504554 C22orf23Q9BZE7 217 aa9.08□□□□□ -0.96
RFC1-207ENST00000504554 FTOQ9C0B1 505 aaKnown RBP eCLIP9.08□□□□□ -0.96
RFC1-207ENST00000504554 NKX2-4Q9H2Z4 354 aa9.08□□□□□ -0.96
RFC1-207ENST00000504554 SMARCAD1Q9H4L7 1026 aa9.08□□□□□ -0.96
RFC1-207ENST00000504554 ERAP1Q9NZ08 941 aa9.08□□□□□ -0.96
RFC1-207ENST00000504554 ORC3Q9UBD5 711 aaPredicted RBP9.08□□□□□ -0.96
RFC1-207ENST00000504554 ZNF215Q9UL58 517 aaPredicted RBP9.08□□□□□ -0.96
RFC1-207ENST00000504554 NRCAMQ92823 1304 aa9.07□□□□□ -0.96
RFC1-207ENST00000504554 CYP3A7-CYP3A51PA0A087WV96 503 aa9.07□□□□□ -0.96
RFC1-207ENST00000504554 RSPH10B2B2RC85 870 aa9.07□□□□□ -0.96
RFC1-207ENST00000504554 CDKL5O76039 1030 aa9.07□□□□□ -0.96
RFC1-207ENST00000504554 CD2BP2O95400 341 aaKnown RBP9.07□□□□□ -0.96
RFC1-207ENST00000504554 CHRNA1P02708 482 aa9.07□□□□□ -0.96
RFC1-207ENST00000504554 PFKMP08237 780 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms