RNA–Protein interactions for RNA: ENST00000504181.1

LSM6-204, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-204ENST00000504181 GPATCH4Q5T3I0 446 aaKnown RBP14.56□□□□□ -0.08
LSM6-204ENST00000504181 OTOP3Q7RTS5 596 aa14.56□□□□□ -0.08
LSM6-204ENST00000504181 ADGRF4Q8IZF3 695 aa14.56□□□□□ -0.08
LSM6-204ENST00000504181 SECISBP2LQ93073 1101 aaKnown RBP14.56□□□□□ -0.08
LSM6-204ENST00000504181 TMX1Q9H3N1 280 aa14.56□□□□□ -0.08
LSM6-204ENST00000504181 SIT1Q9Y3P8 196 aa14.56□□□□□ -0.08
LSM6-204ENST00000504181 OPLAHO14841 1288 aa14.55□□□□□ -0.08
LSM6-204ENST00000504181 SPTLC1O15269 473 aa14.55□□□□□ -0.08
LSM6-204ENST00000504181 FOXP2O15409 715 aa14.55□□□□□ -0.08
LSM6-204ENST00000504181 PDE4AP27815 886 aa14.55□□□□□ -0.08
LSM6-204ENST00000504181 HOXA13P31271 388 aaPredicted RBP14.55□□□□□ -0.08
LSM6-204ENST00000504181 TMEM266Q2M3C6 531 aa14.55□□□□□ -0.08
LSM6-204ENST00000504181 METTL7BQ6UX53 244 aa14.55□□□□□ -0.08
LSM6-204ENST00000504181 TMC5Q6UXY8 1006 aa14.55□□□□□ -0.08
LSM6-204ENST00000504181 CCDC149Q6ZUS6 474 aa14.55□□□□□ -0.08
LSM6-204ENST00000504181 MAML2Q8IZL2 1156 aaPredicted RBP14.55□□□□□ -0.08
LSM6-204ENST00000504181 RSAD2Q8WXG1 361 aa14.55□□□□□ -0.08
LSM6-204ENST00000504181 DZANK1Q9NVP4 752 aa14.55□□□□□ -0.08
LSM6-204ENST00000504181 SMG5Q9UPR3 1016 aaKnown RBP14.55□□□□□ -0.08
LSM6-204ENST00000504181 TRPV2Q9Y5S1 764 aa14.55□□□□□ -0.08
LSM6-204ENST00000504181 SQORQ9Y6N5 450 aa14.55□□□□□ -0.08
LSM6-204ENST00000504181 MTCL1Q9Y4B5 1905 aaKnown RBP14.54□□□□□ -0.08
LSM6-204ENST00000504181 DHX16O60231 1041 aaKnown RBP14.54□□□□□ -0.08
LSM6-204ENST00000504181 SMARCA5O60264 1052 aaPredicted RBP14.54□□□□□ -0.08
LSM6-204ENST00000504181 MGEA5O60502 916 aa14.54□□□□□ -0.08
LSM6-204ENST00000504181 HMMRO75330 724 aa14.54□□□□□ -0.08
LSM6-204ENST00000504181 FGFR1P11362 822 aa14.54□□□□□ -0.08
LSM6-204ENST00000504181 EPCAMP16422 314 aa14.54□□□□□ -0.08
LSM6-204ENST00000504181 MARK3P27448 753 aa14.54□□□□□ -0.08
LSM6-204ENST00000504181 IGBP1P78318 339 aa14.54□□□□□ -0.08
LSM6-204ENST00000504181 KRT17Q04695 432 aa14.54□□□□□ -0.08
LSM6-204ENST00000504181 NEDD9Q14511 834 aa14.54□□□□□ -0.08
LSM6-204ENST00000504181 MARCH8Q5T0T0 291 aa14.54□□□□□ -0.08
LSM6-204ENST00000504181 IER5Q5VY09 327 aa14.54□□□□□ -0.08
LSM6-204ENST00000504181 TSHZ3Q63HK5 1081 aa14.54□□□□□ -0.08
LSM6-204ENST00000504181 KCNT2Q6UVM3 1135 aa14.54□□□□□ -0.08
LSM6-204ENST00000504181 STOX1Q6ZVD7 989 aa14.54□□□□□ -0.08
LSM6-204ENST00000504181 SIRT2Q8IXJ6 389 aa14.54□□□□□ -0.08
LSM6-204ENST00000504181 MRPL43Q8N983 215 aaKnown RBP14.54□□□□□ -0.08
LSM6-204ENST00000504181 PARD6AQ9NPB6 346 aa14.54□□□□□ -0.08
LSM6-204ENST00000504181 ECHDC1Q9NTX5 307 aa14.54□□□□□ -0.08
LSM6-204ENST00000504181 TCP11L1Q9NUJ3 509 aa14.54□□□□□ -0.08
LSM6-204ENST00000504181 ANAPC4Q9UJX5 808 aa14.54□□□□□ -0.08
LSM6-204ENST00000504181 ANGPTL2Q9UKU9 493 aa14.54□□□□□ -0.08
LSM6-204ENST00000504181 IGSF9BQ9UPX0 1349 aa14.54□□□□□ -0.08
LSM6-204ENST00000504181 MBLAC1A4D2B0 266 aaPredicted RBP14.53□□□□□ -0.08
LSM6-204ENST00000504181 M0QZ92 97 aa14.53□□□□□ -0.08
LSM6-204ENST00000504181 LRRN2O75325 713 aa14.53□□□□□ -0.08
LSM6-204ENST00000504181 GLULP15104 373 aa14.53□□□□□ -0.08
LSM6-204ENST00000504181 TGM1P22735 817 aa14.53□□□□□ -0.08
LSM6-204ENST00000504181 NFX1Q12986 1120 aaKnown RBP14.53□□□□□ -0.08
LSM6-204ENST00000504181 VAT1LQ9HCJ6 419 aa14.53□□□□□ -0.08
LSM6-204ENST00000504181 IGSF9Q9P2J2 1179 aa14.53□□□□□ -0.08
LSM6-204ENST00000504181 DENND3A2RUS2 1198 aa14.52□□□□□ -0.09
LSM6-204ENST00000504181 PPM1AP35813 382 aa14.52□□□□□ -0.09
LSM6-204ENST00000504181 SEMA3FQ13275 785 aa14.52□□□□□ -0.09
LSM6-204ENST00000504181 GNPTABQ3T906 1256 aa14.52□□□□□ -0.09
LSM6-204ENST00000504181 PHLDB3Q6NSJ2 640 aa14.52□□□□□ -0.09
LSM6-204ENST00000504181 GPR152Q8TDT2 470 aa14.52□□□□□ -0.09
LSM6-204ENST00000504181 ZNF558Q96NG5 402 aa14.52□□□□□ -0.09
LSM6-204ENST00000504181 FOXQ1Q9C009 403 aa14.52□□□□□ -0.09
LSM6-204ENST00000504181 PCDHA1Q9Y5I3 950 aa14.52□□□□□ -0.09
LSM6-204ENST00000504181 DOCK6Q96HP0 2047 aa14.52□□□□□ -0.09
LSM6-204ENST00000504181 SPDYE4A6NLX3 237 aa14.51□□□□□ -0.09
LSM6-204ENST00000504181 FGRP09769 529 aa14.51□□□□□ -0.09
LSM6-204ENST00000504181 TCF7P36402 384 aaPredicted RBP14.51□□□□□ -0.09
LSM6-204ENST00000504181 GHRHRQ02643 423 aa14.51□□□□□ -0.09
LSM6-204ENST00000504181 ZNF528Q3MIS6 628 aa14.51□□□□□ -0.09
LSM6-204ENST00000504181 LRRC55Q6ZSA7 311 aa14.51□□□□□ -0.09
LSM6-204ENST00000504181 FCHSD1Q86WN1 690 aa14.51□□□□□ -0.09
LSM6-204ENST00000504181 PJA1Q8NG27 643 aa14.51□□□□□ -0.09
LSM6-204ENST00000504181 ATRIPQ8WXE1 791 aa14.51□□□□□ -0.09
LSM6-204ENST00000504181 AUTS2Q8WXX7 1259 aa14.51□□□□□ -0.09
LSM6-204ENST00000504181 ADAM2Q99965 735 aa14.51□□□□□ -0.09
LSM6-204ENST00000504181 CELF4Q9BZC1 486 aaKnown RBP14.51□□□□□ -0.09
LSM6-204ENST00000504181 ATP6V0A4Q9HBG4 840 aa14.51□□□□□ -0.09
LSM6-204ENST00000504181 SPG21Q9NZD8 308 aa14.51□□□□□ -0.09
LSM6-204ENST00000504181 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.51□□□□□ -0.09
LSM6-204ENST00000504181 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.5□□□□□ -0.09
LSM6-204ENST00000504181 SPATA31C2B4DYI2 1134 aa14.5□□□□□ -0.09
LSM6-204ENST00000504181 SLC30A4O14863 429 aa14.5□□□□□ -0.09
LSM6-204ENST00000504181 LAMTOR5O43504 91 aa14.5□□□□□ -0.09
LSM6-204ENST00000504181 CXCL14O95715 111 aa14.5□□□□□ -0.09
LSM6-204ENST00000504181 SRFP11831 508 aa14.5□□□□□ -0.09
LSM6-204ENST00000504181 MRPS9P82933 396 aaKnown RBP14.5□□□□□ -0.09
LSM6-204ENST00000504181 CSTF1Q05048 431 aaKnown RBP14.5□□□□□ -0.09
LSM6-204ENST00000504181 ZMYM1Q5SVZ6 1142 aa14.5□□□□□ -0.09
LSM6-204ENST00000504181 GPR149Q86SP6 731 aa14.5□□□□□ -0.09
LSM6-204ENST00000504181 CABP7Q86V35 215 aa14.5□□□□□ -0.09
LSM6-204ENST00000504181 TMEM87AQ8NBN3 555 aa14.5□□□□□ -0.09
LSM6-204ENST00000504181 TTC14Q96N46 770 aa14.5□□□□□ -0.09
LSM6-204ENST00000504181 LRRCC1Q9C099 1032 aa14.5□□□□□ -0.09
LSM6-204ENST00000504181 EPC1Q9H2F5 836 aa14.5□□□□□ -0.09
LSM6-204ENST00000504181 JMJD4Q9H9V9 463 aa14.5□□□□□ -0.09
LSM6-204ENST00000504181 ARHGEF3Q9NR81 526 aa14.5□□□□□ -0.09
LSM6-204ENST00000504181 RGS18Q9NS28 235 aa14.5□□□□□ -0.09
LSM6-204ENST00000504181 C1orf112Q9NSG2 853 aa14.5□□□□□ -0.09
LSM6-204ENST00000504181 SPATA6Q9NWH7 488 aaPredicted RBP14.5□□□□□ -0.09
LSM6-204ENST00000504181 RTEL1Q9NZ71 1219 aa14.5□□□□□ -0.09
LSM6-204ENST00000504181 PCDHGA2Q9Y5H1 932 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms