RNA–Protein interactions for RNA: ENST00000502840.5

CDC42SE2-205, Transcript of CDC42 small effector 2, humanhuman

TSL 4

Gene CDC42SE2, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-205ENST00000502840 USP40Q9NVE5 1235 aa3.96□□□□□ -1.78
CDC42SE2-205ENST00000502840 MYOTQ9UBF9 498 aa3.96□□□□□ -1.78
CDC42SE2-205ENST00000502840 COQ6Q9Y2Z9 468 aa3.96□□□□□ -1.78
CDC42SE2-205ENST00000502840 KNSTRNQ9Y448 316 aa3.96□□□□□ -1.78
CDC42SE2-205ENST00000502840 DUSP10Q9Y6W6 482 aa3.96□□□□□ -1.78
CDC42SE2-205ENST00000502840 ROCK2O75116 1388 aaKnown RBP3.96□□□□□ -1.78
CDC42SE2-205ENST00000502840 USP47Q96K76 1375 aa3.96□□□□□ -1.78
CDC42SE2-205ENST00000502840 IQGAP2Q13576 1575 aa3.96□□□□□ -1.78
CDC42SE2-205ENST00000502840 PTPRGP23470 1445 aa3.95□□□□□ -1.78
CDC42SE2-205ENST00000502840 KIAA0586Q9BVV6 1533 aa3.95□□□□□ -1.78
CDC42SE2-205ENST00000502840 THOC2Q8NI27 1593 aaKnown RBP3.95□□□□□ -1.78
CDC42SE2-205ENST00000502840 IFT140Q96RY7 1462 aa3.95□□□□□ -1.78
CDC42SE2-205ENST00000502840 ROCK1Q13464 1354 aa3.95□□□□□ -1.78
CDC42SE2-205ENST00000502840 PPM1GO15355 546 aaPredicted RBP3.95□□□□□ -1.78
CDC42SE2-205ENST00000502840 PLIN1O60240 522 aa3.95□□□□□ -1.78
CDC42SE2-205ENST00000502840 DGKIO75912 1065 aa3.95□□□□□ -1.78
CDC42SE2-205ENST00000502840 F2P00734 622 aa3.95□□□□□ -1.78
CDC42SE2-205ENST00000502840 LRG1P02750 347 aa3.95□□□□□ -1.78
CDC42SE2-205ENST00000502840 CDK11BP21127 795 aaKnown RBP3.95□□□□□ -1.78
CDC42SE2-205ENST00000502840 CNGA1P29973 690 aa3.95□□□□□ -1.78
CDC42SE2-205ENST00000502840 FLT3P36888 993 aa3.95□□□□□ -1.78
CDC42SE2-205ENST00000502840 GJA9P57773 515 aa3.95□□□□□ -1.78
CDC42SE2-205ENST00000502840 KRTAP10-2P60368 255 aa3.95□□□□□ -1.78
CDC42SE2-205ENST00000502840 NKX3-2P78367 333 aa3.95□□□□□ -1.78
CDC42SE2-205ENST00000502840 PLEKHG6Q3KR16 790 aa3.95□□□□□ -1.78
CDC42SE2-205ENST00000502840 TMEM177Q53S58 311 aa3.95□□□□□ -1.78
CDC42SE2-205ENST00000502840 CT47A1Q5JQC4 288 aaPredicted RBP3.95□□□□□ -1.78
CDC42SE2-205ENST00000502840 PIK3R6Q5UE93 754 aa3.95□□□□□ -1.78
CDC42SE2-205ENST00000502840 EFCAB2Q5VUJ9 269 aa3.95□□□□□ -1.78
CDC42SE2-205ENST00000502840 CYP4F22Q6NT55 531 aa3.95□□□□□ -1.78
CDC42SE2-205ENST00000502840 TEPPQ6URK8 271 aa3.95□□□□□ -1.78
CDC42SE2-205ENST00000502840 FERMT3Q86UX7 667 aa3.95□□□□□ -1.78
CDC42SE2-205ENST00000502840 TTLL6Q8N841 843 aa3.95□□□□□ -1.78
CDC42SE2-205ENST00000502840 IGSF22Q8N9C0 903 aa3.95□□□□□ -1.78
CDC42SE2-205ENST00000502840 SMC1BQ8NDV3 1235 aa3.95□□□□□ -1.78
CDC42SE2-205ENST00000502840 PHOSPHO1Q8TCT1 267 aa3.95□□□□□ -1.78
CDC42SE2-205ENST00000502840 SH3RF2Q8TEC5 729 aa3.95□□□□□ -1.78
CDC42SE2-205ENST00000502840 TOE1Q96GM8 510 aaKnown RBP3.95□□□□□ -1.78
CDC42SE2-205ENST00000502840 BDH2Q9BUT1 245 aa3.95□□□□□ -1.78
CDC42SE2-205ENST00000502840 SMOC1Q9H4F8 434 aa3.95□□□□□ -1.78
CDC42SE2-205ENST00000502840 WDR26Q9H7D7 661 aa3.95□□□□□ -1.78
CDC42SE2-205ENST00000502840 SLC6A20Q9NP91 592 aa3.95□□□□□ -1.78
CDC42SE2-205ENST00000502840 TYW1Q9NV66 732 aaKnown RBP3.95□□□□□ -1.78
CDC42SE2-205ENST00000502840 DDX56Q9NY93 547 aaKnown RBP3.95□□□□□ -1.78
CDC42SE2-205ENST00000502840 SAMD15Q9P1V8 674 aa3.95□□□□□ -1.78
CDC42SE2-205ENST00000502840 ASH2LQ9UBL3 628 aa3.95□□□□□ -1.78
CDC42SE2-205ENST00000502840 RCAN3Q9UKA8 241 aa3.95□□□□□ -1.78
CDC42SE2-205ENST00000502840 WASF3Q9UPY6 502 aa3.95□□□□□ -1.78
CDC42SE2-205ENST00000502840 MAGI3Q5TCQ9 1506 aa3.95□□□□□ -1.78
CDC42SE2-205ENST00000502840 AKNAQ7Z591 1439 aa3.95□□□□□ -1.78
CDC42SE2-205ENST00000502840 KIAA1107Q9UPP5 1409 aa3.95□□□□□ -1.78
CDC42SE2-205ENST00000502840 MYBBP1AQ9BQG0 1328 aaKnown RBP3.95□□□□□ -1.78
CDC42SE2-205ENST00000502840 TCOF1Q13428 1488 aaKnown RBP3.94□□□□□ -1.78
CDC42SE2-205ENST00000502840 KTN1Q86UP2 1357 aaKnown RBP3.94□□□□□ -1.78
CDC42SE2-205ENST00000502840 KIF15Q9NS87 1388 aa3.94□□□□□ -1.78
CDC42SE2-205ENST00000502840 CCDC66A2RUB6 948 aa3.94□□□□□ -1.78
CDC42SE2-205ENST00000502840 FAM47E-STBD1D6RA91 191 aa3.94□□□□□ -1.78
CDC42SE2-205ENST00000502840 NEMP1O14524 444 aa3.94□□□□□ -1.78
CDC42SE2-205ENST00000502840 ZNF28P17035 718 aa3.94□□□□□ -1.78
CDC42SE2-205ENST00000502840 IBSPP21815 317 aaPredicted RBP3.94□□□□□ -1.78
CDC42SE2-205ENST00000502840 CNR2P34972 360 aa3.94□□□□□ -1.78
CDC42SE2-205ENST00000502840 ADCYAP1R1P41586 468 aa3.94□□□□□ -1.78
CDC42SE2-205ENST00000502840 ID4P47928 161 aa3.94□□□□□ -1.78
CDC42SE2-205ENST00000502840 NEK4P51957 841 aa3.94□□□□□ -1.78
CDC42SE2-205ENST00000502840 EVA1CP58658 441 aa3.94□□□□□ -1.78
CDC42SE2-205ENST00000502840 IGBP1P78318 339 aa3.94□□□□□ -1.78
CDC42SE2-205ENST00000502840 LACTBP83111 547 aaPredicted RBP3.94□□□□□ -1.78
CDC42SE2-205ENST00000502840 NFKB2Q00653 900 aa3.94□□□□□ -1.78
CDC42SE2-205ENST00000502840 SEC23AQ15436 765 aa3.94□□□□□ -1.78
CDC42SE2-205ENST00000502840 FAM47CQ5HY64 1035 aa3.94□□□□□ -1.78
CDC42SE2-205ENST00000502840 FAM26FQ5R3K3 315 aa3.94□□□□□ -1.78
CDC42SE2-205ENST00000502840 OTOP3Q7RTS5 596 aa3.94□□□□□ -1.78
CDC42SE2-205ENST00000502840 DDX53Q86TM3 631 aaKnown RBP3.94□□□□□ -1.78
CDC42SE2-205ENST00000502840 KIF18BQ86Y91 864 aa3.94□□□□□ -1.78
CDC42SE2-205ENST00000502840 NOSTRINQ8IVI9 506 aa3.94□□□□□ -1.78
CDC42SE2-205ENST00000502840 TTLL11Q8NHH1 800 aa3.94□□□□□ -1.78
CDC42SE2-205ENST00000502840 PIP4K2CQ8TBX8 421 aa3.94□□□□□ -1.78
CDC42SE2-205ENST00000502840 LEO1Q8WVC0 666 aaPredicted RBP3.94□□□□□ -1.78
CDC42SE2-205ENST00000502840 ZSWIM3Q96MP5 696 aa3.94□□□□□ -1.78
CDC42SE2-205ENST00000502840 YIPF4Q9BSR8 244 aa3.94□□□□□ -1.78
CDC42SE2-205ENST00000502840 JAM3Q9BX67 310 aa3.94□□□□□ -1.78
CDC42SE2-205ENST00000502840 TRIM8Q9BZR9 551 aa3.94□□□□□ -1.78
CDC42SE2-205ENST00000502840 HSPBP1Q9NZL4 362 aa3.94□□□□□ -1.78
CDC42SE2-205ENST00000502840 B4GALT6Q9UBX8 382 aa3.94□□□□□ -1.78
CDC42SE2-205ENST00000502840 THRAP3Q9Y2W1 955 aaKnown RBP3.94□□□□□ -1.78
CDC42SE2-205ENST00000502840 KDM6BO15054 1643 aa3.94□□□□□ -1.78
CDC42SE2-205ENST00000502840 TROQ12816 1431 aaPredicted RBP3.94□□□□□ -1.78
CDC42SE2-205ENST00000502840 NCOA1Q15788 1441 aa3.94□□□□□ -1.78
CDC42SE2-205ENST00000502840 ANKRD50Q9ULJ7 1429 aa3.94□□□□□ -1.78
CDC42SE2-205ENST00000502840 ARID4BQ4LE39 1312 aaPredicted RBP3.94□□□□□ -1.78
CDC42SE2-205ENST00000502840 FANCIQ9NVI1 1328 aa3.94□□□□□ -1.78
CDC42SE2-205ENST00000502840 KIF21AQ7Z4S6 1674 aa3.94□□□□□ -1.78
CDC42SE2-205ENST00000502840 SAMD9Q5K651 1589 aa3.93□□□□□ -1.78
CDC42SE2-205ENST00000502840 PLB1Q6P1J6 1458 aa3.93□□□□□ -1.78
CDC42SE2-205ENST00000502840 M0R2C6 588 aa3.93□□□□□ -1.78
CDC42SE2-205ENST00000502840 KRIT1O00522 736 aa3.93□□□□□ -1.78
CDC42SE2-205ENST00000502840 MAN2B1O00754 1011 aa3.93□□□□□ -1.78
CDC42SE2-205ENST00000502840 DVL2O14641 736 aa3.93□□□□□ -1.78
CDC42SE2-205ENST00000502840 GPR39O43194 453 aa3.93□□□□□ -1.78
CDC42SE2-205ENST00000502840 MAFKO60675 156 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms