RNA–Protein interactions for RNA: ENST00000502495.1

SCLT1-203, Transcript of sodium channel and clathrin linker 1, humanhuman

TSL 2

Gene SCLT1, Length 1,811 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-203ENST00000502495 PTPDC1A2A3K4 754 aa3.91□□□□□ -1.78
SCLT1-203ENST00000502495 HMGB1P1B2RPK0 211 aaPredicted RBP3.91□□□□□ -1.78
SCLT1-203ENST00000502495 HGSO14964 777 aaPredicted RBP3.91□□□□□ -1.78
SCLT1-203ENST00000502495 MAFKO60675 156 aa3.91□□□□□ -1.78
SCLT1-203ENST00000502495 PPFIA4O75335 1185 aa3.91□□□□□ -1.78
SCLT1-203ENST00000502495 KRT37O76014 449 aa3.91□□□□□ -1.78
SCLT1-203ENST00000502495 AMY2AP04746 511 aa3.91□□□□□ -1.78
SCLT1-203ENST00000502495 CYBBP04839 570 aa3.91□□□□□ -1.78
SCLT1-203ENST00000502495 MPOP05164 745 aa3.91□□□□□ -1.78
SCLT1-203ENST00000502495 AMY2BP19961 511 aa3.91□□□□□ -1.78
SCLT1-203ENST00000502495 PDE6BP35913 854 aa3.91□□□□□ -1.78
SCLT1-203ENST00000502495 LACTBP83111 547 aaPredicted RBP3.91□□□□□ -1.78
SCLT1-203ENST00000502495 RAB3GAP1Q15042 981 aa3.91□□□□□ -1.78
SCLT1-203ENST00000502495 CCSAPQ6IQ19 270 aaPredicted RBP3.91□□□□□ -1.78
SCLT1-203ENST00000502495 PAQR3Q6TCH7 311 aa3.91□□□□□ -1.78
SCLT1-203ENST00000502495 PTRH1Q86Y79 214 aaKnown RBP3.91□□□□□ -1.78
SCLT1-203ENST00000502495 KIF18BQ86Y91 864 aa3.91□□□□□ -1.78
SCLT1-203ENST00000502495 SP8Q8IXZ3 490 aa3.91□□□□□ -1.78
SCLT1-203ENST00000502495 AFAP1L2Q8N4X5 818 aa3.91□□□□□ -1.78
SCLT1-203ENST00000502495 SEC14L1Q92503 715 aa3.91□□□□□ -1.78
SCLT1-203ENST00000502495 B4GALT6Q9UBX8 382 aa3.91□□□□□ -1.78
SCLT1-203ENST00000502495 MCM8Q9UJA3 840 aa3.91□□□□□ -1.78
SCLT1-203ENST00000502495 DSEQ9UL01 958 aa3.91□□□□□ -1.78
SCLT1-203ENST00000502495 CDC42BPBQ9Y5S2 1711 aa3.9□□□□□ -1.78
SCLT1-203ENST00000502495 ARHGEF5Q12774 1597 aa3.9□□□□□ -1.78
SCLT1-203ENST00000502495 SHANK2Q9UPX8 1470 aa3.9□□□□□ -1.78
SCLT1-203ENST00000502495 DAPK1P53355 1430 aa3.9□□□□□ -1.79
SCLT1-203ENST00000502495 ANKRD30AQ9BXX3 1397 aa3.9□□□□□ -1.79
SCLT1-203ENST00000502495 CLSPNQ9HAW4 1339 aa3.9□□□□□ -1.79
SCLT1-203ENST00000502495 MYOCOSA0A1B0GUC4 107 aa3.9□□□□□ -1.79
SCLT1-203ENST00000502495 SLC12A8A0AV02 714 aa3.9□□□□□ -1.79
SCLT1-203ENST00000502495 ZNF561-AS1K7EIQ3 104 aa3.9□□□□□ -1.79
SCLT1-203ENST00000502495 SLC27A2O14975 620 aa3.9□□□□□ -1.79
SCLT1-203ENST00000502495 SGSM2O43147 1006 aa3.9□□□□□ -1.79
SCLT1-203ENST00000502495 SRGAP3O43295 1099 aa3.9□□□□□ -1.79
SCLT1-203ENST00000502495 F2P00734 622 aa3.9□□□□□ -1.79
SCLT1-203ENST00000502495 CENPBP07199 599 aaPredicted RBP3.9□□□□□ -1.79
SCLT1-203ENST00000502495 POU3F3P20264 500 aaPredicted RBP3.9□□□□□ -1.79
SCLT1-203ENST00000502495 SLC6A11P48066 632 aa3.9□□□□□ -1.79
SCLT1-203ENST00000502495 EVA1CP58658 441 aa3.9□□□□□ -1.79
SCLT1-203ENST00000502495 ERVFRD-1P60508 538 aa3.9□□□□□ -1.79
SCLT1-203ENST00000502495 IL2P60568 153 aa3.9□□□□□ -1.79
SCLT1-203ENST00000502495 EXOSC10Q01780 885 aaKnown RBP3.9□□□□□ -1.79
SCLT1-203ENST00000502495 PLP2Q04941 152 aa3.9□□□□□ -1.79
SCLT1-203ENST00000502495 DHCR24Q15392 516 aa3.9□□□□□ -1.79
SCLT1-203ENST00000502495 ARHGAP44Q17R89 818 aa3.9□□□□□ -1.79
SCLT1-203ENST00000502495 HABP4Q5JVS0 413 aaKnown RBP3.9□□□□□ -1.79
SCLT1-203ENST00000502495 SPTY2D1Q68D10 685 aaPredicted RBP3.9□□□□□ -1.79
SCLT1-203ENST00000502495 MILR1Q7Z6M3 343 aa3.9□□□□□ -1.79
SCLT1-203ENST00000502495 RBM12BQ8IXT5 1001 aaKnown RBP3.9□□□□□ -1.79
SCLT1-203ENST00000502495 PEX11GQ96HA9 241 aa3.9□□□□□ -1.79
SCLT1-203ENST00000502495 GPR101Q96P66 508 aaPredicted RBP3.9□□□□□ -1.79
SCLT1-203ENST00000502495 TTC1Q99614 292 aa3.9□□□□□ -1.79
SCLT1-203ENST00000502495 ORAI3Q9BRQ5 295 aa3.9□□□□□ -1.79
SCLT1-203ENST00000502495 CD244Q9BZW8 370 aa3.9□□□□□ -1.79
SCLT1-203ENST00000502495 SMOC1Q9H4F8 434 aa3.9□□□□□ -1.79
SCLT1-203ENST00000502495 SMURF1Q9HCE7 757 aa3.9□□□□□ -1.79
SCLT1-203ENST00000502495 THG1LQ9NWX6 298 aaKnown RBP3.9□□□□□ -1.79
SCLT1-203ENST00000502495 PALD1Q9ULE6 856 aa3.9□□□□□ -1.79
SCLT1-203ENST00000502495 NUB1Q9Y5A7 615 aa3.9□□□□□ -1.79
SCLT1-203ENST00000502495 DNMT1P26358 1616 aaKnown RBP3.9□□□□□ -1.79
SCLT1-203ENST00000502495 CFAP74Q9C0B2 1584 aa3.9□□□□□ -1.79
SCLT1-203ENST00000502495 CCDC141Q6ZP82 1450 aa3.9□□□□□ -1.79
SCLT1-203ENST00000502495 TEX14Q8IWB6 1497 aa3.9□□□□□ -1.79
SCLT1-203ENST00000502495 RTEL1-TNFRSF6BF6WH68 1400 aa3.89□□□□□ -1.79
SCLT1-203ENST00000502495 NCOA1Q15788 1441 aa3.89□□□□□ -1.79
SCLT1-203ENST00000502495 SETD5Q9C0A6 1442 aa3.89□□□□□ -1.79
SCLT1-203ENST00000502495 OR14I1A6ND48 311 aa3.89□□□□□ -1.79
SCLT1-203ENST00000502495 PAX3P23760 479 aa3.89□□□□□ -1.79
SCLT1-203ENST00000502495 MECP2P51608 486 aaKnown RBP3.89□□□□□ -1.79
SCLT1-203ENST00000502495 HNRNPMP52272 730 aaKnown RBP eCLIP3.89□□□□□ -1.79
SCLT1-203ENST00000502495 DSG1Q02413 1049 aa3.89□□□□□ -1.79
SCLT1-203ENST00000502495 UBE4AQ14139 1066 aa3.89□□□□□ -1.79
SCLT1-203ENST00000502495 NR1I3Q14994 352 aa3.89□□□□□ -1.79
SCLT1-203ENST00000502495 C4orf46Q504U0 113 aa3.89□□□□□ -1.79
SCLT1-203ENST00000502495 EMC4Q5J8M3 183 aa3.89□□□□□ -1.79
SCLT1-203ENST00000502495 NLGN4XQ8N0W4 816 aa3.89□□□□□ -1.79
SCLT1-203ENST00000502495 UHMK1Q8TAS1 419 aaKnown RBP3.89□□□□□ -1.79
SCLT1-203ENST00000502495 SH3RF2Q8TEC5 729 aa3.89□□□□□ -1.79
SCLT1-203ENST00000502495 TSR2Q969E8 191 aaKnown RBP3.89□□□□□ -1.79
SCLT1-203ENST00000502495 BOCQ9BWV1 1114 aa3.89□□□□□ -1.79
SCLT1-203ENST00000502495 ZNF552Q9H707 407 aaPredicted RBP3.89□□□□□ -1.79
SCLT1-203ENST00000502495 IFT22Q9H7X7 185 aa3.89□□□□□ -1.79
SCLT1-203ENST00000502495 MYOTQ9UBF9 498 aa3.89□□□□□ -1.79
SCLT1-203ENST00000502495 SRPK3Q9UPE1 567 aa3.89□□□□□ -1.79
SCLT1-203ENST00000502495 PCDHB4Q9Y5E5 795 aa3.89□□□□□ -1.79
SCLT1-203ENST00000502495 ADGRL2O95490 1459 aa3.89□□□□□ -1.79
SCLT1-203ENST00000502495 PTPRKQ15262 1439 aa3.89□□□□□ -1.79
SCLT1-203ENST00000502495 MAP3K4Q9Y6R4 1608 aa3.89□□□□□ -1.79
SCLT1-203ENST00000502495 SAMD9LQ8IVG5 1584 aa3.89□□□□□ -1.79
SCLT1-203ENST00000502495 DIP2BQ9P265 1576 aa3.89□□□□□ -1.79
SCLT1-203ENST00000502495 MAN2B1O00754 1011 aa3.88□□□□□ -1.79
SCLT1-203ENST00000502495 SCDO00767 359 aa3.88□□□□□ -1.79
SCLT1-203ENST00000502495 AKAP8O43823 692 aaKnown RBP3.88□□□□□ -1.79
SCLT1-203ENST00000502495 SH3BP5O60239 455 aa3.88□□□□□ -1.79
SCLT1-203ENST00000502495 TADA3O75528 432 aa3.88□□□□□ -1.79
SCLT1-203ENST00000502495 FKBP9O95302 570 aa3.88□□□□□ -1.79
SCLT1-203ENST00000502495 EYA4O95677 639 aa3.88□□□□□ -1.79
SCLT1-203ENST00000502495 LTFP02788 710 aa3.88□□□□□ -1.79
SCLT1-203ENST00000502495 ATP2A2P16615 1042 aaKnown RBP3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms