RNA–Protein interactions for RNA: ENST00000502495.1

SCLT1-203, Transcript of sodium channel and clathrin linker 1, humanhuman

TSL 2

Gene SCLT1, Length 1,811 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-203ENST00000502495 AEBP2Q6ZN18 517 aaPredicted RBP17.4■□□□□ 0.38
SCLT1-203ENST00000502495 CHIC1Q5VXU3 224 aa16.39■□□□□ 0.21
SCLT1-203ENST00000502495 SENP3Q9H4L4 574 aaPredicted RBP15.02■□□□□ -0
SCLT1-203ENST00000502495 PHF23Q9BUL5 403 aaPredicted RBP14.73□□□□□ -0.05
SCLT1-203ENST00000502495 POTEDQ86YR6 584 aa14.26□□□□□ -0.13
SCLT1-203ENST00000502495 FOXD1Q16676 465 aa13.97□□□□□ -0.17
SCLT1-203ENST00000502495 MSH5O43196 834 aa13.32□□□□□ -0.28
SCLT1-203ENST00000502495 PIAS4Q8N2W9 510 aaPredicted RBP13□□□□□ -0.33
SCLT1-203ENST00000502495 PLPPR3Q6T4P5 718 aa12.83□□□□□ -0.36
SCLT1-203ENST00000502495 PPP6R1Q9UPN7 881 aa12.72□□□□□ -0.37
SCLT1-203ENST00000502495 ADRA2BP18089 450 aa12.69□□□□□ -0.38
SCLT1-203ENST00000502495 DMRT2Q9Y5R5 561 aa11.82□□□□□ -0.52
SCLT1-203ENST00000502495 SCAF1Q9H7N4 1312 aaKnown RBP11.75□□□□□ -0.53
SCLT1-203ENST00000502495 MAPK8IP2Q13387 824 aaPredicted RBP11.75□□□□□ -0.53
SCLT1-203ENST00000502495 CACNB1Q02641 598 aaPredicted RBP11.65□□□□□ -0.55
SCLT1-203ENST00000502495 DCAF8L1A6NGE4 600 aa11.37□□□□□ -0.59
SCLT1-203ENST00000502495 RNF39Q9H2S5 420 aa11.27□□□□□ -0.61
SCLT1-203ENST00000502495 HOXD11P31277 338 aaPredicted RBP11.23□□□□□ -0.61
SCLT1-203ENST00000502495 PPP4R3CPQ6ZMV5 832 aa11.16□□□□□ -0.62
SCLT1-203ENST00000502495 C1QBPQ07021 282 aaKnown RBP11.14□□□□□ -0.63
SCLT1-203ENST00000502495 CNKSR2Q8WXI2 1034 aa11.07□□□□□ -0.64
SCLT1-203ENST00000502495 RNF216Q9NWF9 866 aaPredicted RBP11.07□□□□□ -0.64
SCLT1-203ENST00000502495 DNAJC5BQ9UF47 199 aa10.98□□□□□ -0.65
SCLT1-203ENST00000502495 POTEHQ6S545 545 aa10.91□□□□□ -0.66
SCLT1-203ENST00000502495 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.74□□□□□ -0.69
SCLT1-203ENST00000502495 NCBP3Q53F19 620 aaKnown RBP10.7□□□□□ -0.7
SCLT1-203ENST00000502495 NPM3O75607 178 aaKnown RBP10.44□□□□□ -0.74
SCLT1-203ENST00000502495 CAPN15O75808 1086 aa10.42□□□□□ -0.74
SCLT1-203ENST00000502495 DSG3P32926 999 aa10.42□□□□□ -0.74
SCLT1-203ENST00000502495 U3KPZ7 1027 aaPredicted RBP10.4□□□□□ -0.74
SCLT1-203ENST00000502495 SPINK5Q9NQ38 1064 aaPredicted RBP10.35□□□□□ -0.75
SCLT1-203ENST00000502495 APLP2Q06481 763 aa10.23□□□□□ -0.77
SCLT1-203ENST00000502495 ZNF219Q9P2Y4 722 aaPredicted RBP10.16□□□□□ -0.78
SCLT1-203ENST00000502495 TRHP20396 242 aaPredicted RBP10.15□□□□□ -0.78
SCLT1-203ENST00000502495 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.1□□□□□ -0.79
SCLT1-203ENST00000502495 ABCB7O75027 752 aa10.1□□□□□ -0.79
SCLT1-203ENST00000502495 HNRNPUL2Q1KMD3 747 aaKnown RBP10.1□□□□□ -0.79
SCLT1-203ENST00000502495 SLC4A2P04920 1241 aa10.05□□□□□ -0.8
SCLT1-203ENST00000502495 RBM42Q9BTD8 480 aaKnown RBP10.04□□□□□ -0.8
SCLT1-203ENST00000502495 SAMD1Q6SPF0 538 aaPredicted RBP10□□□□□ -0.81
SCLT1-203ENST00000502495 CHRDL2Q6WN34 429 aa9.91□□□□□ -0.82
SCLT1-203ENST00000502495 KCNA4P22459 653 aa9.87□□□□□ -0.83
SCLT1-203ENST00000502495 POLA2Q14181 598 aa9.78□□□□□ -0.84
SCLT1-203ENST00000502495 SP7Q8TDD2 431 aaPredicted RBP9.75□□□□□ -0.85
SCLT1-203ENST00000502495 MYCNP04198 464 aaPredicted RBP9.72□□□□□ -0.85
SCLT1-203ENST00000502495 AKT1S1Q96B36 256 aa9.7□□□□□ -0.86
SCLT1-203ENST00000502495 PLSCR2Q9NRY7 297 aa9.68□□□□□ -0.86
SCLT1-203ENST00000502495 ZBTB12Q9Y330 459 aaPredicted RBP9.65□□□□□ -0.86
SCLT1-203ENST00000502495 PIP4P2Q8N4L2 257 aa9.57□□□□□ -0.88
SCLT1-203ENST00000502495 REM2Q8IYK8 340 aaPredicted RBP9.56□□□□□ -0.88
SCLT1-203ENST00000502495 HAX1O00165 279 aa9.54□□□□□ -0.88
SCLT1-203ENST00000502495 FXR2P51116 673 aaKnown RBP eCLIP9.47□□□□□ -0.89
SCLT1-203ENST00000502495 OSCARQ8IYS5 282 aa9.46□□□□□ -0.9
SCLT1-203ENST00000502495 PITPNM1O00562 1244 aa9.45□□□□□ -0.9
SCLT1-203ENST00000502495 ATF5Q9Y2D1 282 aaPredicted RBP9.42□□□□□ -0.9
SCLT1-203ENST00000502495 FOXD4L1Q9NU39 408 aa9.4□□□□□ -0.9
SCLT1-203ENST00000502495 SLC4A1APQ9BWU0 796 aaKnown RBP9.31□□□□□ -0.92
SCLT1-203ENST00000502495 EVX2Q03828 476 aa9.29□□□□□ -0.92
SCLT1-203ENST00000502495 SPDYE2BA6NHP3 402 aa9.27□□□□□ -0.93
SCLT1-203ENST00000502495 SPDYE6P0CI01 402 aa9.27□□□□□ -0.93
SCLT1-203ENST00000502495 SPDYE2Q495Y8 402 aa9.27□□□□□ -0.93
SCLT1-203ENST00000502495 PRKAR2AP13861 404 aaKnown RBP9.23□□□□□ -0.93
SCLT1-203ENST00000502495 FBLN2P98095 1184 aa9.23□□□□□ -0.93
SCLT1-203ENST00000502495 SPDYE1Q8NFV5 336 aaPredicted RBP9.21□□□□□ -0.93
SCLT1-203ENST00000502495 ATXN8OSP0DMR3 200 aa9.19□□□□□ -0.94
SCLT1-203ENST00000502495 C19orf67A6NJJ6 358 aa9.18□□□□□ -0.94
SCLT1-203ENST00000502495 CLEC11AQ9Y240 323 aa9.18□□□□□ -0.94
SCLT1-203ENST00000502495 LHX8Q68G74 356 aa9.15□□□□□ -0.95
SCLT1-203ENST00000502495 GABBR2O75899 941 aa9.13□□□□□ -0.95
SCLT1-203ENST00000502495 ZNF692Q9BU19 519 aaPredicted RBP9.08□□□□□ -0.96
SCLT1-203ENST00000502495 SSUH2Q9Y2M2 353 aa9.06□□□□□ -0.96
SCLT1-203ENST00000502495 ZBTB22O15209 634 aa9.03□□□□□ -0.96
SCLT1-203ENST00000502495 PRR29P0C7W0 189 aa9□□□□□ -0.97
SCLT1-203ENST00000502495 CHADLQ6NUI6 762 aa9□□□□□ -0.97
SCLT1-203ENST00000502495 MKRN4PQ13434 485 aaPredicted RBP8.98□□□□□ -0.97
SCLT1-203ENST00000502495 CLCN6P51797 869 aa8.97□□□□□ -0.97
SCLT1-203ENST00000502495 CD44P16070 742 aaKnown RBP8.92□□□□□ -0.98
SCLT1-203ENST00000502495 EHMT2Q96KQ7 1210 aa8.92□□□□□ -0.98
SCLT1-203ENST00000502495 PABPN1Q86U42 306 aaKnown RBP eCLIP8.91□□□□□ -0.98
SCLT1-203ENST00000502495 POTEIP0CG38 1075 aa8.88□□□□□ -0.99
SCLT1-203ENST00000502495 FARP1Q9Y4F1 1045 aaPredicted RBP8.87□□□□□ -0.99
SCLT1-203ENST00000502495 DCBLD2Q96PD2 775 aa8.86□□□□□ -0.99
SCLT1-203ENST00000502495 ZNF579Q8NAF0 562 aaKnown RBP8.77□□□□□ -1
SCLT1-203ENST00000502495 ZRANB1Q9UGI0 708 aa8.74□□□□□ -1.01
SCLT1-203ENST00000502495 CSRNP3Q8WYN3 585 aa8.69□□□□□ -1.02
SCLT1-203ENST00000502495 STAG3Q9UJ98 1225 aa8.68□□□□□ -1.02
SCLT1-203ENST00000502495 PAK3O75914 559 aaPredicted RBP8.66□□□□□ -1.02
SCLT1-203ENST00000502495 OTUD5Q96G74 571 aa8.65□□□□□ -1.02
SCLT1-203ENST00000502495 GALR2O43603 387 aaPredicted RBP8.64□□□□□ -1.03
SCLT1-203ENST00000502495 CREBZFQ9NS37 354 aa8.64□□□□□ -1.03
SCLT1-203ENST00000502495 POTEMA6NI47 508 aa8.62□□□□□ -1.03
SCLT1-203ENST00000502495 PCDH10Q9P2E7 1040 aa8.59□□□□□ -1.03
SCLT1-203ENST00000502495 POTEGQ6S5H5 508 aa8.59□□□□□ -1.03
SCLT1-203ENST00000502495 POTEB2H3BUK9 544 aa8.57□□□□□ -1.04
SCLT1-203ENST00000502495 NPM1P06748 294 aaKnown RBP eCLIP8.56□□□□□ -1.04
SCLT1-203ENST00000502495 PHF12Q96QT6 1004 aa8.54□□□□□ -1.04
SCLT1-203ENST00000502495 MAMSTRQ6ZN01 415 aa8.52□□□□□ -1.05
SCLT1-203ENST00000502495 SLC39A7Q92504 469 aa8.5□□□□□ -1.05
SCLT1-203ENST00000502495 C7P10643 843 aa8.49□□□□□ -1.05
SCLT1-203ENST00000502495 PELP1Q8IZL8 1130 aaKnown RBP8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms