RNA–Protein interactions for RNA: ENST00000497703.1

GARNL3-221, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 3

Gene GARNL3, Length 304 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-221ENST00000497703 BTBD7Q9P203 1132 aa9.49□□□□□ -0.89
GARNL3-221ENST00000497703 WDR62O43379 1518 aa9.48□□□□□ -0.89
GARNL3-221ENST00000497703 K7ESF4 209 aa9.48□□□□□ -0.89
GARNL3-221ENST00000497703 ATF2P15336 505 aa9.48□□□□□ -0.89
GARNL3-221ENST00000497703 EPHB3P54753 998 aa9.48□□□□□ -0.89
GARNL3-221ENST00000497703 SLC6A3Q01959 620 aa9.48□□□□□ -0.89
GARNL3-221ENST00000497703 KLF1Q13351 362 aaPredicted RBP9.48□□□□□ -0.89
GARNL3-221ENST00000497703 SKIDA1Q1XH10 827 aa9.48□□□□□ -0.89
GARNL3-221ENST00000497703 SLFN12LQ6IEE8 588 aa9.48□□□□□ -0.89
GARNL3-221ENST00000497703 IGDCC3Q8IVU1 814 aa9.48□□□□□ -0.89
GARNL3-221ENST00000497703 RPGRQ92834 1020 aaKnown RBP9.48□□□□□ -0.89
GARNL3-221ENST00000497703 MAML3Q96JK9 1138 aa9.48□□□□□ -0.89
GARNL3-221ENST00000497703 SIGLEC10Q96LC7 697 aa9.48□□□□□ -0.89
GARNL3-221ENST00000497703 SLC38A3Q99624 504 aa9.48□□□□□ -0.89
GARNL3-221ENST00000497703 ASPSCR1Q9BZE9 553 aa9.48□□□□□ -0.89
GARNL3-221ENST00000497703 KCNK12Q9HB15 430 aa9.48□□□□□ -0.89
GARNL3-221ENST00000497703 GALNT8Q9NY28 637 aa9.48□□□□□ -0.89
GARNL3-221ENST00000497703 ALDH1L1O75891 902 aa9.47□□□□□ -0.89
GARNL3-221ENST00000497703 CFBP00751 764 aa9.47□□□□□ -0.89
GARNL3-221ENST00000497703 MC4RP32245 332 aa9.47□□□□□ -0.89
GARNL3-221ENST00000497703 SCAND1P57086 179 aa9.47□□□□□ -0.89
GARNL3-221ENST00000497703 ALDH6A1Q02252 535 aaKnown RBP9.47□□□□□ -0.89
GARNL3-221ENST00000497703 LIPIQ6XZB0 460 aa9.47□□□□□ -0.89
GARNL3-221ENST00000497703 RTN4RL1Q86UN2 441 aaPredicted RBP9.47□□□□□ -0.89
GARNL3-221ENST00000497703 DTX3Q8N9I9 347 aa9.47□□□□□ -0.89
GARNL3-221ENST00000497703 PPP1R16BQ96T49 567 aa9.47□□□□□ -0.89
GARNL3-221ENST00000497703 CCDC8Q9H0W5 538 aaPredicted RBP9.47□□□□□ -0.89
GARNL3-221ENST00000497703 POFUT1Q9H488 388 aa9.47□□□□□ -0.89
GARNL3-221ENST00000497703 TOPORSQ9NS56 1045 aaPredicted RBP9.47□□□□□ -0.89
GARNL3-221ENST00000497703 TCEAL9Q9UHQ7 104 aa9.47□□□□□ -0.89
GARNL3-221ENST00000497703 FARP2O94887 1054 aaPredicted RBP9.46□□□□□ -0.9
GARNL3-221ENST00000497703 PRLP01236 227 aa9.46□□□□□ -0.9
GARNL3-221ENST00000497703 CCND1P24385 295 aa9.46□□□□□ -0.9
GARNL3-221ENST00000497703 ECE1P42892 770 aa9.46□□□□□ -0.9
GARNL3-221ENST00000497703 SYDE1Q6ZW31 735 aaPredicted RBP9.46□□□□□ -0.9
GARNL3-221ENST00000497703 KYQ8NBH2 561 aa9.46□□□□□ -0.9
GARNL3-221ENST00000497703 JDP2Q8WYK2 163 aa9.46□□□□□ -0.9
GARNL3-221ENST00000497703 FOXRED1Q96CU9 486 aaPredicted RBP9.46□□□□□ -0.9
GARNL3-221ENST00000497703 FAM84AQ96KN4 292 aa9.46□□□□□ -0.9
GARNL3-221ENST00000497703 BTBD2Q9BX70 525 aa9.46□□□□□ -0.9
GARNL3-221ENST00000497703 WNT8AQ9H1J5 351 aa9.46□□□□□ -0.9
GARNL3-221ENST00000497703 RBPJLQ9UBG7 517 aa9.46□□□□□ -0.9
GARNL3-221ENST00000497703 MRFAP1Q9Y605 127 aa9.46□□□□□ -0.9
GARNL3-221ENST00000497703 PMF1-BGLAPU3KQ54 211 aa9.46□□□□□ -0.9
GARNL3-221ENST00000497703 SHTN1A0MZ66 631 aa9.45□□□□□ -0.9
GARNL3-221ENST00000497703 TCAF2A6NFQ2 919 aa9.45□□□□□ -0.9
GARNL3-221ENST00000497703 NFIBO00712 420 aa9.45□□□□□ -0.9
GARNL3-221ENST00000497703 PRPF6O94906 941 aaKnown RBP9.45□□□□□ -0.9
GARNL3-221ENST00000497703 MYBL2P10244 700 aa9.45□□□□□ -0.9
GARNL3-221ENST00000497703 GLDCP23378 1020 aa9.45□□□□□ -0.9
GARNL3-221ENST00000497703 IGFBP6P24592 240 aaPredicted RBP9.45□□□□□ -0.9
GARNL3-221ENST00000497703 GLRBP48167 497 aa9.45□□□□□ -0.9
GARNL3-221ENST00000497703 EPHB1P54762 984 aa9.45□□□□□ -0.9
GARNL3-221ENST00000497703 ITGA1P56199 1179 aa9.45□□□□□ -0.9
GARNL3-221ENST00000497703 ADCY2Q08462 1091 aa9.45□□□□□ -0.9
GARNL3-221ENST00000497703 MAP3K12Q12852 859 aa9.45□□□□□ -0.9
GARNL3-221ENST00000497703 TTLL7Q6ZT98 887 aa9.45□□□□□ -0.9
GARNL3-221ENST00000497703 ZBTB46Q86UZ6 589 aa9.45□□□□□ -0.9
GARNL3-221ENST00000497703 PROSER1Q86XN7 944 aa9.45□□□□□ -0.9
GARNL3-221ENST00000497703 ZBTB8AQ96BR9 441 aa9.45□□□□□ -0.9
GARNL3-221ENST00000497703 ZNF496Q96IT1 587 aaPredicted RBP9.45□□□□□ -0.9
GARNL3-221ENST00000497703 GORASP1Q9BQQ3 440 aa9.45□□□□□ -0.9
GARNL3-221ENST00000497703 C11orf84Q9BUA3 381 aaPredicted RBP9.45□□□□□ -0.9
GARNL3-221ENST00000497703 TRIM8Q9BZR9 551 aa9.45□□□□□ -0.9
GARNL3-221ENST00000497703 VTA1Q9NP79 307 aa9.45□□□□□ -0.9
GARNL3-221ENST00000497703 ZFP69BQ9UJL9 534 aa9.45□□□□□ -0.9
GARNL3-221ENST00000497703 ETV2O00321 342 aaPredicted RBP9.44□□□□□ -0.9
GARNL3-221ENST00000497703 APEX1P27695 318 aaKnown RBP9.44□□□□□ -0.9
GARNL3-221ENST00000497703 LIMS1P48059 325 aa9.44□□□□□ -0.9
GARNL3-221ENST00000497703 NEK2P51955 445 aa9.44□□□□□ -0.9
GARNL3-221ENST00000497703 BCAR1P56945 870 aa9.44□□□□□ -0.9
GARNL3-221ENST00000497703 ERVK-21P61565 698 aa9.44□□□□□ -0.9
GARNL3-221ENST00000497703 KIAA1841Q6NSI8 718 aa9.44□□□□□ -0.9
GARNL3-221ENST00000497703 PGM2L1Q6PCE3 622 aa9.44□□□□□ -0.9
GARNL3-221ENST00000497703 CXorf67Q86X51 503 aaPredicted RBP9.44□□□□□ -0.9
GARNL3-221ENST00000497703 CHMP4CQ96CF2 233 aa9.44□□□□□ -0.9
GARNL3-221ENST00000497703 MYL10Q9BUA6 226 aa9.44□□□□□ -0.9
GARNL3-221ENST00000497703 OR10A5Q9H207 317 aa9.44□□□□□ -0.9
GARNL3-221ENST00000497703 MS4A5Q9H3V2 200 aa9.44□□□□□ -0.9
GARNL3-221ENST00000497703 MKS1Q9NXB0 559 aa9.44□□□□□ -0.9
GARNL3-221ENST00000497703 CROTQ9UKG9 612 aa9.44□□□□□ -0.9
GARNL3-221ENST00000497703 ARAP1Q96P48 1450 aa9.43□□□□□ -0.9
GARNL3-221ENST00000497703 RFXAPO00287 272 aa9.43□□□□□ -0.9
GARNL3-221ENST00000497703 GABRDO14764 452 aa9.43□□□□□ -0.9
GARNL3-221ENST00000497703 TTF1Q15361 905 aaPredicted RBP9.43□□□□□ -0.9
GARNL3-221ENST00000497703 STK32CQ86UX6 486 aa9.43□□□□□ -0.9
GARNL3-221ENST00000497703 ZSWIM3Q96MP5 696 aa9.43□□□□□ -0.9
GARNL3-221ENST00000497703 ANO3Q9BYT9 981 aa9.43□□□□□ -0.9
GARNL3-221ENST00000497703 GCM1Q9NP62 436 aa9.43□□□□□ -0.9
GARNL3-221ENST00000497703 G3BP2Q9UN86 482 aaKnown RBP9.43□□□□□ -0.9
GARNL3-221ENST00000497703 PAX4O43316 350 aa9.42□□□□□ -0.9
GARNL3-221ENST00000497703 CLUL1Q15846 466 aa9.42□□□□□ -0.9
GARNL3-221ENST00000497703 PTPN21Q16825 1174 aa9.42□□□□□ -0.9
GARNL3-221ENST00000497703 UGT8Q16880 541 aa9.42□□□□□ -0.9
GARNL3-221ENST00000497703 ABCB5Q2M3G0 1257 aa9.42□□□□□ -0.9
GARNL3-221ENST00000497703 CXXC5Q7LFL8 322 aaKnown RBP9.42□□□□□ -0.9
GARNL3-221ENST00000497703 PNMA8AQ86V59 439 aaPredicted RBP9.42□□□□□ -0.9
GARNL3-221ENST00000497703 LMBR1Q8WVP7 490 aa9.42□□□□□ -0.9
GARNL3-221ENST00000497703 TACO1Q9BSH4 297 aaKnown RBP9.42□□□□□ -0.9
GARNL3-221ENST00000497703 AASDHPPTQ9NRN7 309 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms