RNA–Protein interactions for RNA: ENST00000496116.1

CMSS1-208, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 1 (best)

Gene CMSS1, Length 2,145 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-208ENST00000496116 PTGER2P43116 358 aa12.13□□□□□ -0.47
CMSS1-208ENST00000496116 APBA1Q02410 837 aa12.13□□□□□ -0.47
CMSS1-208ENST00000496116 MAP3K10Q02779 954 aa12.13□□□□□ -0.47
CMSS1-208ENST00000496116 C2orf54Q08AI8 447 aa12.13□□□□□ -0.47
CMSS1-208ENST00000496116 NAB2Q15742 525 aa12.13□□□□□ -0.47
CMSS1-208ENST00000496116 HSP90B2PQ58FF3 399 aa12.13□□□□□ -0.47
CMSS1-208ENST00000496116 NFRKBQ6P4R8 1299 aa12.13□□□□□ -0.47
CMSS1-208ENST00000496116 HS2ST1Q7LGA3 356 aa12.13□□□□□ -0.47
CMSS1-208ENST00000496116 MCF2L2Q86YR7 1114 aa12.13□□□□□ -0.47
CMSS1-208ENST00000496116 FAM178BQ8IXR5 827 aa12.13□□□□□ -0.47
CMSS1-208ENST00000496116 SLC35C1Q96A29 364 aa12.13□□□□□ -0.47
CMSS1-208ENST00000496116 MXRA8Q9BRK3 442 aa12.13□□□□□ -0.47
CMSS1-208ENST00000496116 MKNK1Q9BUB5 465 aa12.13□□□□□ -0.47
CMSS1-208ENST00000496116 UNC45AQ9H3U1 944 aa12.13□□□□□ -0.47
CMSS1-208ENST00000496116 PDE11AQ9HCR9 933 aa12.13□□□□□ -0.47
CMSS1-208ENST00000496116 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.13□□□□□ -0.47
CMSS1-208ENST00000496116 SALL4Q9UJQ4 1053 aa12.13□□□□□ -0.47
CMSS1-208ENST00000496116 PCDHB13Q9Y5F0 798 aa12.13□□□□□ -0.47
CMSS1-208ENST00000496116 A0A087X0T9 212 aa12.13□□□□□ -0.47
CMSS1-208ENST00000496116 WNT10BO00744 389 aa12.13□□□□□ -0.47
CMSS1-208ENST00000496116 TGFB1I1O43294 461 aa12.13□□□□□ -0.47
CMSS1-208ENST00000496116 FAM228BP0C875 321 aa12.13□□□□□ -0.47
CMSS1-208ENST00000496116 ARP10275 920 aa12.13□□□□□ -0.47
CMSS1-208ENST00000496116 BCRP11274 1271 aa12.13□□□□□ -0.47
CMSS1-208ENST00000496116 ACTN1P12814 892 aa12.13□□□□□ -0.47
CMSS1-208ENST00000496116 DPEP1P16444 411 aa12.13□□□□□ -0.47
CMSS1-208ENST00000496116 NMT1P30419 496 aaKnown RBP12.13□□□□□ -0.47
CMSS1-208ENST00000496116 HSD17B4P51659 736 aa12.13□□□□□ -0.47
CMSS1-208ENST00000496116 ZNF131P52739 623 aa12.13□□□□□ -0.47
CMSS1-208ENST00000496116 KIAA0753Q2KHM9 967 aa12.13□□□□□ -0.47
CMSS1-208ENST00000496116 VPS36Q86VN1 386 aa12.13□□□□□ -0.47
CMSS1-208ENST00000496116 PRPF38AQ8NAV1 312 aaKnown RBP12.13□□□□□ -0.47
CMSS1-208ENST00000496116 SPATA4Q8NEY3 305 aa12.13□□□□□ -0.47
CMSS1-208ENST00000496116 GOLGA5Q8TBA6 731 aa12.13□□□□□ -0.47
CMSS1-208ENST00000496116 COG1Q8WTW3 980 aa12.13□□□□□ -0.47
CMSS1-208ENST00000496116 LPAR1Q92633 364 aa12.13□□□□□ -0.47
CMSS1-208ENST00000496116 LXNQ9BS40 222 aa12.13□□□□□ -0.47
CMSS1-208ENST00000496116 ZNF341Q9BYN7 854 aa12.13□□□□□ -0.47
CMSS1-208ENST00000496116 VIPAS39Q9H9C1 493 aa12.13□□□□□ -0.47
CMSS1-208ENST00000496116 SUGCTQ9HAC7 445 aa12.13□□□□□ -0.47
CMSS1-208ENST00000496116 FBXO28Q9NVF7 368 aa12.13□□□□□ -0.47
CMSS1-208ENST00000496116 GCNT4Q9P109 453 aa12.13□□□□□ -0.47
CMSS1-208ENST00000496116 COL4A5P29400 1685 aa12.13□□□□□ -0.47
CMSS1-208ENST00000496116 ARHGEF35A5YM69 484 aa12.12□□□□□ -0.47
CMSS1-208ENST00000496116 WDR46O15213 610 aaKnown RBP12.12□□□□□ -0.47
CMSS1-208ENST00000496116 FLOT1O75955 427 aa12.12□□□□□ -0.47
CMSS1-208ENST00000496116 CASP4P49662 377 aa12.12□□□□□ -0.47
CMSS1-208ENST00000496116 KCNA1Q09470 495 aa12.12□□□□□ -0.47
CMSS1-208ENST00000496116 ENOX2Q16206 610 aaKnown RBP12.12□□□□□ -0.47
CMSS1-208ENST00000496116 CFAP221Q4G0U5 840 aa12.12□□□□□ -0.47
CMSS1-208ENST00000496116 ODR4Q5SWX8 454 aa12.12□□□□□ -0.47
CMSS1-208ENST00000496116 B3GNT9Q6UX72 402 aa12.12□□□□□ -0.47
CMSS1-208ENST00000496116 SLC30A10Q6XR72 485 aa12.12□□□□□ -0.47
CMSS1-208ENST00000496116 ZNF720Q7Z2F6 126 aa12.12□□□□□ -0.47
CMSS1-208ENST00000496116 CDAN1Q8IWY9 1227 aa12.12□□□□□ -0.47
CMSS1-208ENST00000496116 FAM186BQ8IYM0 893 aa12.12□□□□□ -0.47
CMSS1-208ENST00000496116 ZBED3Q96IU2 234 aaPredicted RBP12.12□□□□□ -0.47
CMSS1-208ENST00000496116 TLR10Q9BXR5 811 aa12.12□□□□□ -0.47
CMSS1-208ENST00000496116 GLIS2Q9BZE0 524 aaPredicted RBP12.12□□□□□ -0.47
CMSS1-208ENST00000496116 POLD4Q9HCU8 107 aa12.12□□□□□ -0.47
CMSS1-208ENST00000496116 FRMD4BQ9Y2L6 1034 aa12.12□□□□□ -0.47
CMSS1-208ENST00000496116 MYH11P35749 1972 aa12.12□□□□□ -0.47
CMSS1-208ENST00000496116 A0A0U1RQG5 324 aaPredicted RBP12.11□□□□□ -0.47
CMSS1-208ENST00000496116 BTNL10A8MVZ5 291 aa12.11□□□□□ -0.47
CMSS1-208ENST00000496116 KCNA3P22001 575 aa12.11□□□□□ -0.47
CMSS1-208ENST00000496116 GUCY2CP25092 1073 aa12.11□□□□□ -0.47
CMSS1-208ENST00000496116 KLRC1P26715 233 aa12.11□□□□□ -0.47
CMSS1-208ENST00000496116 PRKCIP41743 596 aa12.11□□□□□ -0.47
CMSS1-208ENST00000496116 PTK2Q05397 1052 aa12.11□□□□□ -0.47
CMSS1-208ENST00000496116 TNFAIP1Q13829 316 aa12.11□□□□□ -0.47
CMSS1-208ENST00000496116 IFI16Q16666 785 aaKnown RBP12.11□□□□□ -0.47
CMSS1-208ENST00000496116 NIPA1Q7RTP0 329 aa12.11□□□□□ -0.47
CMSS1-208ENST00000496116 IRF2BP2Q7Z5L9 587 aa12.11□□□□□ -0.47
CMSS1-208ENST00000496116 AGBL1Q96MI9 1066 aa12.11□□□□□ -0.47
CMSS1-208ENST00000496116 ZCCHC17Q9NP64 241 aaKnown RBP12.11□□□□□ -0.47
CMSS1-208ENST00000496116 MYOZ2Q9NPC6 264 aa12.11□□□□□ -0.47
CMSS1-208ENST00000496116 MED4Q9NPJ6 270 aa12.11□□□□□ -0.47
CMSS1-208ENST00000496116 MAP3K20Q9NYL2 800 aaKnown RBP12.11□□□□□ -0.47
CMSS1-208ENST00000496116 PGAP2Q9UHJ9 254 aa12.11□□□□□ -0.47
CMSS1-208ENST00000496116 ZHX1Q9UKY1 873 aaPredicted RBP12.11□□□□□ -0.47
CMSS1-208ENST00000496116 PCDHGC5Q9Y5F6 944 aa12.11□□□□□ -0.47
CMSS1-208ENST00000496116 ZMYM2Q9UBW7 1377 aa12.11□□□□□ -0.47
CMSS1-208ENST00000496116 ZBTB39O15060 712 aa12.11□□□□□ -0.47
CMSS1-208ENST00000496116 PALMO75781 387 aa12.11□□□□□ -0.47
CMSS1-208ENST00000496116 CXCR5P32302 372 aa12.11□□□□□ -0.47
CMSS1-208ENST00000496116 CYP2C19P33261 490 aa12.11□□□□□ -0.47
CMSS1-208ENST00000496116 TNNT3P45378 269 aaPredicted RBP12.11□□□□□ -0.47
CMSS1-208ENST00000496116 CXCL9Q07325 125 aa12.11□□□□□ -0.47
CMSS1-208ENST00000496116 NBPF9Q3BBW0 867 aa12.11□□□□□ -0.47
CMSS1-208ENST00000496116 ZC2HC1CQ53FD0 456 aaPredicted RBP12.11□□□□□ -0.47
CMSS1-208ENST00000496116 CIAPIN1Q6FI81 312 aa12.11□□□□□ -0.47
CMSS1-208ENST00000496116 DPY19L2P1Q6NXN4 242 aa12.11□□□□□ -0.47
CMSS1-208ENST00000496116 MIER3Q7Z3K6 550 aa12.11□□□□□ -0.47
CMSS1-208ENST00000496116 FMNL3Q8IVF7 1028 aa12.11□□□□□ -0.47
CMSS1-208ENST00000496116 CCDC102AQ96A19 550 aa12.11□□□□□ -0.47
CMSS1-208ENST00000496116 HOOK2Q96ED9 719 aa12.11□□□□□ -0.47
CMSS1-208ENST00000496116 PSMB7Q99436 277 aa12.11□□□□□ -0.47
CMSS1-208ENST00000496116 GINM1Q9NU53 330 aa12.11□□□□□ -0.47
CMSS1-208ENST00000496116 H3BQF6 201 aa12.1□□□□□ -0.47
CMSS1-208ENST00000496116 NCK2O43639 380 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms