RNA–Protein interactions for RNA: ENST00000495817.1

CCDC39-207, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 1,047 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-207ENST00000495817 EPHB1P54762 984 aa7.89□□□□□ -1.15
CCDC39-207ENST00000495817 ITKQ08881 620 aa7.89□□□□□ -1.15
CCDC39-207ENST00000495817 SKIDA1Q1XH10 827 aa7.89□□□□□ -1.15
CCDC39-207ENST00000495817 CCDC181Q5TID7 509 aa7.89□□□□□ -1.15
CCDC39-207ENST00000495817 PRAMEF18Q5VWM3 479 aa7.89□□□□□ -1.15
CCDC39-207ENST00000495817 CREB3L3Q68CJ9 461 aa7.89□□□□□ -1.15
CCDC39-207ENST00000495817 ZSWIM3Q96MP5 696 aa7.89□□□□□ -1.15
CCDC39-207ENST00000495817 SPTLC3Q9NUV7 552 aa7.89□□□□□ -1.15
CCDC39-207ENST00000495817 RTEL1Q9NZ71 1219 aa7.89□□□□□ -1.15
CCDC39-207ENST00000495817 CHPF2Q9P2E5 772 aa7.89□□□□□ -1.15
CCDC39-207ENST00000495817 SPEF1Q9Y4P9 236 aa7.89□□□□□ -1.15
CCDC39-207ENST00000495817 ZBTB48P10074 688 aaPredicted RBP7.88□□□□□ -1.15
CCDC39-207ENST00000495817 TTF1Q15361 905 aaPredicted RBP7.88□□□□□ -1.15
CCDC39-207ENST00000495817 FAM124AQ86V42 546 aa7.88□□□□□ -1.15
CCDC39-207ENST00000495817 CNTD1Q8N815 330 aa7.88□□□□□ -1.15
CCDC39-207ENST00000495817 MTMR8Q96EF0 704 aa7.88□□□□□ -1.15
CCDC39-207ENST00000495817 L2HGDHQ9H9P8 463 aa7.88□□□□□ -1.15
CCDC39-207ENST00000495817 KCNH7Q9NS40 1196 aa7.88□□□□□ -1.15
CCDC39-207ENST00000495817 USP40Q9NVE5 1235 aa7.88□□□□□ -1.15
CCDC39-207ENST00000495817 ARHGAP20Q9P2F6 1191 aa7.88□□□□□ -1.15
CCDC39-207ENST00000495817 TCEAL9Q9UHQ7 104 aa7.88□□□□□ -1.15
CCDC39-207ENST00000495817 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.87□□□□□ -1.15
CCDC39-207ENST00000495817 H7C1D1 291 aa7.87□□□□□ -1.15
CCDC39-207ENST00000495817 NOBOXO60393 691 aa7.87□□□□□ -1.15
CCDC39-207ENST00000495817 HIP1RO75146 1068 aa7.87□□□□□ -1.15
CCDC39-207ENST00000495817 FBXO21O94952 628 aa7.87□□□□□ -1.15
CCDC39-207ENST00000495817 C4BPAP04003 597 aaKnown RBP7.87□□□□□ -1.15
CCDC39-207ENST00000495817 AOAHP28039 575 aa7.87□□□□□ -1.15
CCDC39-207ENST00000495817 SESN3P58005 492 aa7.87□□□□□ -1.15
CCDC39-207ENST00000495817 PFKPQ01813 784 aa7.87□□□□□ -1.15
CCDC39-207ENST00000495817 RTP5Q14D33 572 aa7.87□□□□□ -1.15
CCDC39-207ENST00000495817 SMAD2Q15796 467 aaKnown RBP7.87□□□□□ -1.15
CCDC39-207ENST00000495817 NT5DC1Q5TFE4 455 aa7.87□□□□□ -1.15
CCDC39-207ENST00000495817 SYDE2Q5VT97 1194 aa7.87□□□□□ -1.15
CCDC39-207ENST00000495817 IQSEC1Q6DN90 963 aa7.87□□□□□ -1.15
CCDC39-207ENST00000495817 PASD1Q8IV76 773 aa7.87□□□□□ -1.15
CCDC39-207ENST00000495817 FEZF2Q8TBJ5 459 aa7.87□□□□□ -1.15
CCDC39-207ENST00000495817 TEPSINQ96N21 525 aa7.87□□□□□ -1.15
CCDC39-207ENST00000495817 TRIM8Q9BZR9 551 aa7.87□□□□□ -1.15
CCDC39-207ENST00000495817 ARHGAP28Q9P2N2 729 aa7.87□□□□□ -1.15
CCDC39-207ENST00000495817 RBPJLQ9UBG7 517 aa7.87□□□□□ -1.15
CCDC39-207ENST00000495817 FTSJ1Q9UET6 329 aa7.87□□□□□ -1.15
CCDC39-207ENST00000495817 CROTQ9UKG9 612 aa7.87□□□□□ -1.15
CCDC39-207ENST00000495817 B3GALT1Q9Y5Z6 326 aa7.87□□□□□ -1.15
CCDC39-207ENST00000495817 EID1Q9Y6B2 187 aa7.87□□□□□ -1.15
CCDC39-207ENST00000495817 PRAMEF25A6NGN4 478 aa7.86□□□□□ -1.15
CCDC39-207ENST00000495817 OTOL1A6NHN0 477 aaPredicted RBP7.86□□□□□ -1.15
CCDC39-207ENST00000495817 HOXA5P20719 270 aa7.86□□□□□ -1.15
CCDC39-207ENST00000495817 IL13P35225 146 aa7.86□□□□□ -1.15
CCDC39-207ENST00000495817 NEK2P51955 445 aa7.86□□□□□ -1.15
CCDC39-207ENST00000495817 IRF9Q00978 393 aa7.86□□□□□ -1.15
CCDC39-207ENST00000495817 KIAA2012Q0VF49 1180 aa7.86□□□□□ -1.15
CCDC39-207ENST00000495817 ZNF174Q15697 407 aa7.86□□□□□ -1.15
CCDC39-207ENST00000495817 RGL3Q3MIN7 710 aa7.86□□□□□ -1.15
CCDC39-207ENST00000495817 SYT8Q8NBV8 401 aa7.86□□□□□ -1.15
CCDC39-207ENST00000495817 COG1Q8WTW3 980 aa7.86□□□□□ -1.15
CCDC39-207ENST00000495817 YTHDC1Q96MU7 727 aaKnown RBP7.86□□□□□ -1.15
CCDC39-207ENST00000495817 KCND1Q9NSA2 647 aa7.86□□□□□ -1.15
CCDC39-207ENST00000495817 ZFP69BQ9UJL9 534 aa7.86□□□□□ -1.15
CCDC39-207ENST00000495817 SPO11Q9Y5K1 396 aa7.86□□□□□ -1.15
CCDC39-207ENST00000495817 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.85□□□□□ -1.15
CCDC39-207ENST00000495817 DDX3XO00571 662 aaKnown RBP eCLIP7.85□□□□□ -1.15
CCDC39-207ENST00000495817 PRKD3O94806 890 aa7.85□□□□□ -1.15
CCDC39-207ENST00000495817 SDHAP31040 664 aa7.85□□□□□ -1.15
CCDC39-207ENST00000495817 MLLT6P55198 1093 aaPredicted RBP7.85□□□□□ -1.15
CCDC39-207ENST00000495817 PHC1P78364 1004 aa7.85□□□□□ -1.15
CCDC39-207ENST00000495817 GPR158Q5T848 1215 aa7.85□□□□□ -1.15
CCDC39-207ENST00000495817 BORAQ6PGQ7 559 aa7.85□□□□□ -1.15
CCDC39-207ENST00000495817 TXNDC5Q8NBS9 432 aaKnown RBP7.85□□□□□ -1.15
CCDC39-207ENST00000495817 ZCCHC14Q8WYQ9 949 aaKnown RBP7.85□□□□□ -1.15
CCDC39-207ENST00000495817 DLG3Q92796 817 aa7.85□□□□□ -1.15
CCDC39-207ENST00000495817 SLC5A5Q92911 643 aa7.85□□□□□ -1.15
CCDC39-207ENST00000495817 LCORQ96JN0 433 aaPredicted RBP7.85□□□□□ -1.15
CCDC39-207ENST00000495817 TRHDEQ9UKU6 1024 aa7.85□□□□□ -1.15
CCDC39-207ENST00000495817 MROH6A6NGR9 719 aa7.84□□□□□ -1.15
CCDC39-207ENST00000495817 SCDO00767 359 aa7.84□□□□□ -1.15
CCDC39-207ENST00000495817 TGM5O43548 720 aa7.84□□□□□ -1.15
CCDC39-207ENST00000495817 KNG1P01042 644 aa7.84□□□□□ -1.15
CCDC39-207ENST00000495817 CYP1A1P04798 512 aaPredicted RBP7.84□□□□□ -1.15
CCDC39-207ENST00000495817 COL6A1P12109 1028 aa7.84□□□□□ -1.15
CCDC39-207ENST00000495817 PTGS1P23219 599 aa7.84□□□□□ -1.15
CCDC39-207ENST00000495817 MCL1Q07820 350 aa7.84□□□□□ -1.15
CCDC39-207ENST00000495817 NFE2Q16621 373 aaPredicted RBP7.84□□□□□ -1.15
CCDC39-207ENST00000495817 HSP90AB2PQ58FF8 381 aa7.84□□□□□ -1.15
CCDC39-207ENST00000495817 CPZQ66K79 652 aa7.84□□□□□ -1.15
CCDC39-207ENST00000495817 TRMT10BQ6PF06 316 aaKnown RBP7.84□□□□□ -1.15
CCDC39-207ENST00000495817 DPP8Q6V1X1 898 aaPredicted RBP7.84□□□□□ -1.15
CCDC39-207ENST00000495817 NOL8Q76FK4 1167 aaKnown RBP7.84□□□□□ -1.15
CCDC39-207ENST00000495817 FMNL3Q8IVF7 1028 aa7.84□□□□□ -1.15
CCDC39-207ENST00000495817 CHMP4CQ96CF2 233 aa7.84□□□□□ -1.15
CCDC39-207ENST00000495817 TMEM168Q9H0V1 697 aa7.84□□□□□ -1.15
CCDC39-207ENST00000495817 CCDC8Q9H0W5 538 aaPredicted RBP7.84□□□□□ -1.15
CCDC39-207ENST00000495817 ACSS2Q9NR19 701 aa7.84□□□□□ -1.15
CCDC39-207ENST00000495817 H2AFY2Q9P0M6 372 aaPredicted RBP7.84□□□□□ -1.15
CCDC39-207ENST00000495817 A0A0G2JLL6 359 aaPredicted RBP7.83□□□□□ -1.16
CCDC39-207ENST00000495817 KCNK3O14649 394 aa7.83□□□□□ -1.16
CCDC39-207ENST00000495817 GABRDO14764 452 aa7.83□□□□□ -1.16
CCDC39-207ENST00000495817 KRT37O76014 449 aa7.83□□□□□ -1.16
CCDC39-207ENST00000495817 CTSWP56202 376 aa7.83□□□□□ -1.16
CCDC39-207ENST00000495817 NFIXQ14938 502 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms