RNA–Protein interactions for RNA: ENST00000495528.1

VIM-207, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 962 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-207ENST00000495528 JAMLQ86YT9 394 aa8.33□□□□□ -1.08
VIM-207ENST00000495528 SNED1Q8TER0 1413 aa8.33□□□□□ -1.08
VIM-207ENST00000495528 JDP2Q8WYK2 163 aa8.33□□□□□ -1.08
VIM-207ENST00000495528 COPS5Q92905 334 aa8.33□□□□□ -1.08
VIM-207ENST00000495528 KIRREL1Q96J84 757 aa8.33□□□□□ -1.08
VIM-207ENST00000495528 SP110Q9HB58 689 aa8.33□□□□□ -1.08
VIM-207ENST00000495528 DDX21Q9NR30 783 aaKnown RBP eCLIP8.33□□□□□ -1.08
VIM-207ENST00000495528 ABT1Q9ULW3 272 aaKnown RBP8.33□□□□□ -1.08
VIM-207ENST00000495528 RRP7AQ9Y3A4 280 aaKnown RBP8.33□□□□□ -1.08
VIM-207ENST00000495528 MAP3K15Q6ZN16 1313 aa8.32□□□□□ -1.08
VIM-207ENST00000495528 BIN1O00499 593 aa8.32□□□□□ -1.08
VIM-207ENST00000495528 MYL6BP14649 208 aa8.32□□□□□ -1.08
VIM-207ENST00000495528 TAL1P17542 331 aaPredicted RBP8.32□□□□□ -1.08
VIM-207ENST00000495528 GPTP24298 496 aa8.32□□□□□ -1.08
VIM-207ENST00000495528 EIF4A1P60842 406 aaKnown RBP8.32□□□□□ -1.08
VIM-207ENST00000495528 CYP4F3Q08477 520 aa8.32□□□□□ -1.08
VIM-207ENST00000495528 SUSD4Q5VX71 490 aa8.32□□□□□ -1.08
VIM-207ENST00000495528 HLA-DQA1Q5Y7H0 255 aa8.32□□□□□ -1.08
VIM-207ENST00000495528 CYP2R1Q6VVX0 501 aa8.32□□□□□ -1.08
VIM-207ENST00000495528 TMEM145Q8NBT3 493 aa8.32□□□□□ -1.08
VIM-207ENST00000495528 RPGRQ92834 1020 aaKnown RBP8.32□□□□□ -1.08
VIM-207ENST00000495528 JMJD8Q96S16 334 aa8.32□□□□□ -1.08
VIM-207ENST00000495528 NYXQ9GZU5 481 aa8.32□□□□□ -1.08
VIM-207ENST00000495528 BCORQ6W2J9 1755 aa8.32□□□□□ -1.08
VIM-207ENST00000495528 UBN2Q6ZU65 1347 aa8.31□□□□□ -1.08
VIM-207ENST00000495528 SCN4AP35499 1836 aa8.31□□□□□ -1.08
VIM-207ENST00000495528 TRAV20A0A0B4J274 112 aa8.31□□□□□ -1.08
VIM-207ENST00000495528 NPHP3-ACAD11A0A0J9YXS1 232 aa8.31□□□□□ -1.08
VIM-207ENST00000495528 NOTOA8MTQ0 251 aa8.31□□□□□ -1.08
VIM-207ENST00000495528 TRAF5O00463 557 aa8.31□□□□□ -1.08
VIM-207ENST00000495528 PAPLNO95428 1278 aa8.31□□□□□ -1.08
VIM-207ENST00000495528 EFEMP2O95967 443 aa8.31□□□□□ -1.08
VIM-207ENST00000495528 FAM153BP0C7A2 387 aa8.31□□□□□ -1.08
VIM-207ENST00000495528 PAMP19021 973 aa8.31□□□□□ -1.08
VIM-207ENST00000495528 GFRA1P56159 465 aa8.31□□□□□ -1.08
VIM-207ENST00000495528 MAP2K1Q02750 393 aaPredicted RBP8.31□□□□□ -1.08
VIM-207ENST00000495528 KCNMB1Q16558 191 aa8.31□□□□□ -1.08
VIM-207ENST00000495528 HSF5Q4G112 596 aaPredicted RBP8.31□□□□□ -1.08
VIM-207ENST00000495528 CST9Q5W186 159 aa8.31□□□□□ -1.08
VIM-207ENST00000495528 CYP4F22Q6NT55 531 aa8.31□□□□□ -1.08
VIM-207ENST00000495528 KIF6Q6ZMV9 814 aa8.31□□□□□ -1.08
VIM-207ENST00000495528 ZNF34Q8IZ26 560 aa8.31□□□□□ -1.08
VIM-207ENST00000495528 LILRB2Q8N423 598 aa8.31□□□□□ -1.08
VIM-207ENST00000495528 FRS2Q8WU20 508 aa8.31□□□□□ -1.08
VIM-207ENST00000495528 ZNF669Q96BR6 464 aaPredicted RBP8.31□□□□□ -1.08
VIM-207ENST00000495528 ABHD8Q96I13 439 aa8.31□□□□□ -1.08
VIM-207ENST00000495528 PLCD4Q9BRC7 762 aa8.31□□□□□ -1.08
VIM-207ENST00000495528 THUMPD2Q9BTF0 503 aaKnown RBP8.31□□□□□ -1.08
VIM-207ENST00000495528 RNF32Q9H0A6 362 aa8.31□□□□□ -1.08
VIM-207ENST00000495528 TAF6LQ9Y6J9 622 aa8.31□□□□□ -1.08
VIM-207ENST00000495528 CACNA1SQ13698 1873 aa8.31□□□□□ -1.08
VIM-207ENST00000495528 COL4A5P29400 1685 aa8.3□□□□□ -1.08
VIM-207ENST00000495528 ADAMTSL1Q8N6G6 1762 aa8.3□□□□□ -1.08
VIM-207ENST00000495528 ARFGEF2Q9Y6D5 1785 aa8.3□□□□□ -1.08
VIM-207ENST00000495528 A0A1W2PQ27 194 aa8.3□□□□□ -1.08
VIM-207ENST00000495528 A0A1W2PQ64 194 aa8.3□□□□□ -1.08
VIM-207ENST00000495528 A0A1W2PQC6 194 aa8.3□□□□□ -1.08
VIM-207ENST00000495528 A0A1W2PQD8 194 aa8.3□□□□□ -1.08
VIM-207ENST00000495528 ADCY3O60266 1144 aa8.3□□□□□ -1.08
VIM-207ENST00000495528 GRM1Q13255 1194 aa8.3□□□□□ -1.08
VIM-207ENST00000495528 NSMFQ6X4W1 530 aa8.3□□□□□ -1.08
VIM-207ENST00000495528 USP50Q70EL3 339 aaPredicted RBP8.3□□□□□ -1.08
VIM-207ENST00000495528 SLCO6A1Q86UG4 719 aa8.3□□□□□ -1.08
VIM-207ENST00000495528 PNISRQ8TF01 805 aaKnown RBP8.3□□□□□ -1.08
VIM-207ENST00000495528 RBM17Q96I25 401 aaKnown RBP8.3□□□□□ -1.08
VIM-207ENST00000495528 CRAMP1Q96RY5 1269 aa8.3□□□□□ -1.08
VIM-207ENST00000495528 CDC6Q99741 560 aa8.3□□□□□ -1.08
VIM-207ENST00000495528 IMPACTQ9P2X3 320 aa8.3□□□□□ -1.08
VIM-207ENST00000495528 TMEFF2Q9UIK5 374 aaPredicted RBP8.3□□□□□ -1.08
VIM-207ENST00000495528 A0A1W2PQ45 241 aaPredicted RBP8.29□□□□□ -1.08
VIM-207ENST00000495528 A0A1W2PQY0 241 aa8.29□□□□□ -1.08
VIM-207ENST00000495528 WTIPA6NIX2 430 aaPredicted RBP8.29□□□□□ -1.08
VIM-207ENST00000495528 PPIP5K2O43314 1243 aa8.29□□□□□ -1.08
VIM-207ENST00000495528 NRDCO43847 1150 aa8.29□□□□□ -1.08
VIM-207ENST00000495528 DLX3O60479 287 aa8.29□□□□□ -1.08
VIM-207ENST00000495528 NTSR2O95665 410 aa8.29□□□□□ -1.08
VIM-207ENST00000495528 CPP00450 1065 aa8.29□□□□□ -1.08
VIM-207ENST00000495528 CAPNS1P04632 268 aa8.29□□□□□ -1.08
VIM-207ENST00000495528 PABPC1P11940 636 aaKnown RBP8.29□□□□□ -1.08
VIM-207ENST00000495528 NR0B2Q15466 257 aa8.29□□□□□ -1.08
VIM-207ENST00000495528 TMEM67Q5HYA8 995 aa8.29□□□□□ -1.08
VIM-207ENST00000495528 FOXB2Q5VYV0 432 aa8.29□□□□□ -1.08
VIM-207ENST00000495528 ZSWIM9Q86XI8 627 aa8.29□□□□□ -1.08
VIM-207ENST00000495528 NIM1KQ8IY84 436 aa8.29□□□□□ -1.08
VIM-207ENST00000495528 LILRA2Q8N149 483 aa8.29□□□□□ -1.08
VIM-207ENST00000495528 ZBTB38Q8NAP3 1195 aaPredicted RBP8.29□□□□□ -1.08
VIM-207ENST00000495528 NUP43Q8NFH3 380 aa8.29□□□□□ -1.08
VIM-207ENST00000495528 NPLOC4Q8TAT6 608 aa8.29□□□□□ -1.08
VIM-207ENST00000495528 KCTD13Q8WZ19 329 aa8.29□□□□□ -1.08
VIM-207ENST00000495528 FAM168AQ92567 244 aa8.29□□□□□ -1.08
VIM-207ENST00000495528 CAPNS2Q96L46 248 aa8.29□□□□□ -1.08
VIM-207ENST00000495528 CCDC140Q96MF4 163 aa8.29□□□□□ -1.08
VIM-207ENST00000495528 GPR101Q96P66 508 aaPredicted RBP8.29□□□□□ -1.08
VIM-207ENST00000495528 PLEKHF1Q96S99 279 aa8.29□□□□□ -1.08
VIM-207ENST00000495528 IBTKQ9P2D0 1353 aaPredicted RBP8.28□□□□□ -1.08
VIM-207ENST00000495528 BLACEA4D250 179 aa8.28□□□□□ -1.08
VIM-207ENST00000495528 PRKCAP17252 672 aa8.28□□□□□ -1.08
VIM-207ENST00000495528 ITGB5P18084 799 aa8.28□□□□□ -1.08
VIM-207ENST00000495528 L1CAMP32004 1257 aa8.28□□□□□ -1.08
VIM-207ENST00000495528 ECE1P42892 770 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms