RNA–Protein interactions for RNA: ENST00000494893.5

SNX17-209, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 966 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-209ENST00000494893 KIAA0319LQ8IZA0 1049 aa19.23■□□□□ 0.67
SNX17-209ENST00000494893 NIFKQ9BYG3 293 aaKnown RBP19.23■□□□□ 0.67
SNX17-209ENST00000494893 NRBP2Q9NSY0 501 aa19.23■□□□□ 0.67
SNX17-209ENST00000494893 GRXCR1A8MXD5 290 aa19.22■□□□□ 0.67
SNX17-209ENST00000494893 ZBTB39O15060 712 aa19.22■□□□□ 0.67
SNX17-209ENST00000494893 SLITRK3O94933 977 aa19.22■□□□□ 0.67
SNX17-209ENST00000494893 PARNO95453 639 aaKnown RBP19.22■□□□□ 0.67
SNX17-209ENST00000494893 QARSP47897 775 aaKnown RBP19.22■□□□□ 0.67
SNX17-209ENST00000494893 MRPS6P82932 125 aaKnown RBP19.22■□□□□ 0.67
SNX17-209ENST00000494893 TMEM62Q0P6H9 643 aa19.22■□□□□ 0.67
SNX17-209ENST00000494893 MKRN4PQ13434 485 aaPredicted RBP19.22■□□□□ 0.67
SNX17-209ENST00000494893 CTTNQ14247 550 aaKnown RBP19.22■□□□□ 0.67
SNX17-209ENST00000494893 PLA2G4FQ68DD2 849 aa19.22■□□□□ 0.67
SNX17-209ENST00000494893 ZNF579Q8NAF0 562 aaKnown RBP19.22■□□□□ 0.67
SNX17-209ENST00000494893 HSD17B14Q9BPX1 270 aa19.22■□□□□ 0.67
SNX17-209ENST00000494893 EIF2AK1Q9BQI3 630 aaKnown RBP19.22■□□□□ 0.67
SNX17-209ENST00000494893 LXNQ9BS40 222 aa19.22■□□□□ 0.67
SNX17-209ENST00000494893 FTOQ9C0B1 505 aaKnown RBP eCLIP19.22■□□□□ 0.67
SNX17-209ENST00000494893 SEPT9Q9UHD8 586 aaPredicted RBP19.22■□□□□ 0.67
SNX17-209ENST00000494893 CDY2AQ9Y6F7 541 aa19.22■□□□□ 0.67
SNX17-209ENST00000494893 SZT2Q5T011 3432 aa19.22■□□□□ 0.67
SNX17-209ENST00000494893 VPS37CA5D8V6 355 aaPredicted RBP19.21■□□□□ 0.67
SNX17-209ENST00000494893 CLCN3P51790 818 aa19.21■□□□□ 0.67
SNX17-209ENST00000494893 CYP4A11Q02928 519 aa19.21■□□□□ 0.67
SNX17-209ENST00000494893 PTGDRQ13258 359 aa19.21■□□□□ 0.67
SNX17-209ENST00000494893 IL17AQ16552 155 aa19.21■□□□□ 0.67
SNX17-209ENST00000494893 PLEKHG4Q58EX7 1191 aa19.21■□□□□ 0.67
SNX17-209ENST00000494893 FERMT3Q86UX7 667 aa19.21■□□□□ 0.67
SNX17-209ENST00000494893 DBF4BQ8NFT6 615 aa19.21■□□□□ 0.67
SNX17-209ENST00000494893 CDHR5Q9HBB8 845 aa19.21■□□□□ 0.67
SNX17-209ENST00000494893 CIZ1Q9ULV3 898 aaPredicted RBP19.21■□□□□ 0.67
SNX17-209ENST00000494893 MYH9P35579 1960 aaKnown RBP19.21■□□□□ 0.67
SNX17-209ENST00000494893 DDX11L8A8MPP1 907 aa19.2■□□□□ 0.66
SNX17-209ENST00000494893 SPATA31C1P0DKV0 1188 aa19.2■□□□□ 0.66
SNX17-209ENST00000494893 TECP42680 631 aa19.2■□□□□ 0.66
SNX17-209ENST00000494893 NPEPPSP55786 919 aa19.2■□□□□ 0.66
SNX17-209ENST00000494893 LPIN1Q14693 890 aa19.2■□□□□ 0.66
SNX17-209ENST00000494893 MTERF2Q49AM1 385 aa19.2■□□□□ 0.66
SNX17-209ENST00000494893 RILPL1Q5EBL4 403 aa19.2■□□□□ 0.66
SNX17-209ENST00000494893 CNKSR3Q6P9H4 555 aa19.2■□□□□ 0.66
SNX17-209ENST00000494893 C4orf19Q8IY42 314 aa19.2■□□□□ 0.66
SNX17-209ENST00000494893 LRRC71Q8N4P6 559 aa19.2■□□□□ 0.66
SNX17-209ENST00000494893 CEP131Q9UPN4 1083 aa19.2■□□□□ 0.66
SNX17-209ENST00000494893 MTMR6Q9Y217 621 aa19.2■□□□□ 0.66
SNX17-209ENST00000494893 KAT6AQ92794 2004 aa19.2■□□□□ 0.66
SNX17-209ENST00000494893 IGKV6-21A0A0C4DH24 114 aa19.19■□□□□ 0.66
SNX17-209ENST00000494893 GHRP10912 638 aa19.19■□□□□ 0.66
SNX17-209ENST00000494893 PDCP20941 246 aa19.19■□□□□ 0.66
SNX17-209ENST00000494893 RESTQ13127 1097 aa19.19■□□□□ 0.66
SNX17-209ENST00000494893 DRP2Q13474 957 aa19.19■□□□□ 0.66
SNX17-209ENST00000494893 FBXO47Q5MNV8 452 aa19.19■□□□□ 0.66
SNX17-209ENST00000494893 RSPH3Q86UC2 560 aa19.19■□□□□ 0.66
SNX17-209ENST00000494893 AGO3Q9H9G7 860 aaKnown RBP19.19■□□□□ 0.66
SNX17-209ENST00000494893 CHMP5Q9NZZ3 219 aa19.19■□□□□ 0.66
SNX17-209ENST00000494893 TRPV2Q9Y5S1 764 aa19.19■□□□□ 0.66
SNX17-209ENST00000494893 A0A087WWV3 80 aa19.18■□□□□ 0.66
SNX17-209ENST00000494893 ZBBXA8MT70 800 aa19.18■□□□□ 0.66
SNX17-209ENST00000494893 MAGEB2O15479 319 aa19.18■□□□□ 0.66
SNX17-209ENST00000494893 MED24O75448 989 aa19.18■□□□□ 0.66
SNX17-209ENST00000494893 LYPLA2O95372 231 aa19.18■□□□□ 0.66
SNX17-209ENST00000494893 VTNP04004 478 aa19.18■□□□□ 0.66
SNX17-209ENST00000494893 FXR2P51116 673 aaKnown RBP eCLIP19.18■□□□□ 0.66
SNX17-209ENST00000494893 SMAD3P84022 425 aaKnown RBP19.18■□□□□ 0.66
SNX17-209ENST00000494893 EFCAB12Q6NXP0 572 aa19.18■□□□□ 0.66
SNX17-209ENST00000494893 TPH2Q8IWU9 490 aa19.18■□□□□ 0.66
SNX17-209ENST00000494893 NME8Q8N427 588 aa19.18■□□□□ 0.66
SNX17-209ENST00000494893 CELF4Q9BZC1 486 aaKnown RBP19.18■□□□□ 0.66
SNX17-209ENST00000494893 ZSWIM4Q9H7M6 989 aa19.18■□□□□ 0.66
SNX17-209ENST00000494893 CYP26B1Q9NR63 512 aa19.18■□□□□ 0.66
SNX17-209ENST00000494893 KDM3AQ9Y4C1 1321 aa19.18■□□□□ 0.66
SNX17-209ENST00000494893 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.17■□□□□ 0.66
SNX17-209ENST00000494893 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.17■□□□□ 0.66
SNX17-209ENST00000494893 GPR32O75388 356 aa19.17■□□□□ 0.66
SNX17-209ENST00000494893 MAFO75444 373 aaPredicted RBP19.17■□□□□ 0.66
SNX17-209ENST00000494893 BAIAP3O94812 1187 aa19.17■□□□□ 0.66
SNX17-209ENST00000494893 ACTN1P12814 892 aa19.17■□□□□ 0.66
SNX17-209ENST00000494893 YWHABP31946 246 aaKnown RBP19.17■□□□□ 0.66
SNX17-209ENST00000494893 PBX2P40425 430 aa19.17■□□□□ 0.66
SNX17-209ENST00000494893 WDR5P61964 334 aaKnown RBP19.17■□□□□ 0.66
SNX17-209ENST00000494893 DEFB103AP81534 67 aa19.17■□□□□ 0.66
SNX17-209ENST00000494893 ATP2C1P98194 919 aaPredicted RBP19.17■□□□□ 0.66
SNX17-209ENST00000494893 IER5Q5VY09 327 aa19.17■□□□□ 0.66
SNX17-209ENST00000494893 BRAPQ7Z569 592 aa19.17■□□□□ 0.66
SNX17-209ENST00000494893 METTL13Q8N6R0 699 aa19.17■□□□□ 0.66
SNX17-209ENST00000494893 IGSF22Q8N9C0 903 aa19.17■□□□□ 0.66
SNX17-209ENST00000494893 NEK9Q8TD19 979 aa19.17■□□□□ 0.66
SNX17-209ENST00000494893 TMEM40Q8WWA1 233 aa19.17■□□□□ 0.66
SNX17-209ENST00000494893 PPP1R16BQ96T49 567 aa19.17■□□□□ 0.66
SNX17-209ENST00000494893 SLC4A7Q9Y6M7 1214 aa19.17■□□□□ 0.66
SNX17-209ENST00000494893 PTPRSQ13332 1948 aa19.16■□□□□ 0.66
SNX17-209ENST00000494893 DKC1O60832 514 aaKnown RBP eCLIP19.16■□□□□ 0.66
SNX17-209ENST00000494893 RPLP2P05387 115 aaKnown RBP19.16■□□□□ 0.66
SNX17-209ENST00000494893 PRPHP41219 470 aa19.16■□□□□ 0.66
SNX17-209ENST00000494893 TBC1D8BQ0IIM8 1120 aa19.16■□□□□ 0.66
SNX17-209ENST00000494893 ECM1Q16610 540 aa19.16■□□□□ 0.66
SNX17-209ENST00000494893 FAM173BQ6P4H8 233 aa19.16■□□□□ 0.66
SNX17-209ENST00000494893 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.16■□□□□ 0.664e-9■■■■■ 37.8
SNX17-209ENST00000494893 TMCO2Q7Z6W1 182 aaPredicted RBP19.16■□□□□ 0.66
SNX17-209ENST00000494893 CATSPER3Q86XQ3 398 aa19.16■□□□□ 0.66
SNX17-209ENST00000494893 MTIF3Q9H2K0 278 aaKnown RBP19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms