RNA–Protein interactions for RNA: ENST00000493949.1

PDLIM1-205, Transcript of PDZ and LIM domain 1, humanhuman

TSL 3

Gene PDLIM1, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-205ENST00000493949 PWP2Q15269 919 aaKnown RBP11.87□□□□□ -0.51
PDLIM1-205ENST00000493949 TKFCQ3LXA3 575 aa11.87□□□□□ -0.51
PDLIM1-205ENST00000493949 DPCR1Q3MIW9 517 aa11.87□□□□□ -0.51
PDLIM1-205ENST00000493949 TPRNQ4KMQ1 711 aa11.87□□□□□ -0.51
PDLIM1-205ENST00000493949 EEPD1Q7L9B9 569 aa11.87□□□□□ -0.51
PDLIM1-205ENST00000493949 HOMER1Q86YM7 354 aa11.87□□□□□ -0.51
PDLIM1-205ENST00000493949 NCOA7Q8NI08 942 aa11.87□□□□□ -0.51
PDLIM1-205ENST00000493949 WASF1Q92558 559 aa11.87□□□□□ -0.51
PDLIM1-205ENST00000493949 KIFC2Q96AC6 838 aa11.87□□□□□ -0.51
PDLIM1-205ENST00000493949 GPHNQ9NQX3 736 aaPredicted RBP11.87□□□□□ -0.51
PDLIM1-205ENST00000493949 HOMER2Q9NSB8 354 aa11.87□□□□□ -0.51
PDLIM1-205ENST00000493949 CHD6Q8TD26 2715 aa11.87□□□□□ -0.51
PDLIM1-205ENST00000493949 DNAH14Q0VDD8 3507 aa11.86□□□□□ -0.51
PDLIM1-205ENST00000493949 CCDC151A5D8V7 595 aa11.86□□□□□ -0.51
PDLIM1-205ENST00000493949 A6NJR5 290 aa11.86□□□□□ -0.51
PDLIM1-205ENST00000493949 STXBP3O00186 592 aa11.86□□□□□ -0.51
PDLIM1-205ENST00000493949 NBL1P41271 181 aa11.86□□□□□ -0.51
PDLIM1-205ENST00000493949 SYKP43405 635 aa11.86□□□□□ -0.51
PDLIM1-205ENST00000493949 RCAN1P53805 252 aa11.86□□□□□ -0.51
PDLIM1-205ENST00000493949 VCPP55072 806 aaKnown RBP11.86□□□□□ -0.51
PDLIM1-205ENST00000493949 SIGLEC14Q08ET2 396 aa11.86□□□□□ -0.51
PDLIM1-205ENST00000493949 GPM6BQ13491 265 aa11.86□□□□□ -0.51
PDLIM1-205ENST00000493949 IKBKEQ14164 716 aa11.86□□□□□ -0.51
PDLIM1-205ENST00000493949 CBX2Q14781 532 aaPredicted RBP11.86□□□□□ -0.51
PDLIM1-205ENST00000493949 TTF1Q15361 905 aaPredicted RBP11.86□□□□□ -0.51
PDLIM1-205ENST00000493949 ARHGAP29Q52LW3 1261 aa11.86□□□□□ -0.51
PDLIM1-205ENST00000493949 BRDTQ58F21 947 aaPredicted RBP11.86□□□□□ -0.51
PDLIM1-205ENST00000493949 AXDND1Q5T1B0 1012 aaPredicted RBP11.86□□□□□ -0.51
PDLIM1-205ENST00000493949 SYT10Q6XYQ8 523 aa11.86□□□□□ -0.51
PDLIM1-205ENST00000493949 LRRC8DQ7L1W4 858 aa11.86□□□□□ -0.51
PDLIM1-205ENST00000493949 SESTD1Q86VW0 696 aa11.86□□□□□ -0.51
PDLIM1-205ENST00000493949 HNRNPLLQ8WVV9 542 aaKnown RBP11.86□□□□□ -0.51
PDLIM1-205ENST00000493949 MKL1Q969V6 931 aa11.86□□□□□ -0.51
PDLIM1-205ENST00000493949 ASIC4Q96FT7 647 aa11.86□□□□□ -0.51
PDLIM1-205ENST00000493949 WDR11Q9BZH6 1224 aa11.86□□□□□ -0.51
PDLIM1-205ENST00000493949 RNF146Q9NTX7 359 aa11.86□□□□□ -0.51
PDLIM1-205ENST00000493949 SYNPO2Q9UMS6 1093 aa11.86□□□□□ -0.51
PDLIM1-205ENST00000493949 NOD1Q9Y239 953 aa11.86□□□□□ -0.51
PDLIM1-205ENST00000493949 ACACBO00763 2458 aa11.86□□□□□ -0.51
PDLIM1-205ENST00000493949 EP300Q09472 2414 aaPredicted RBP11.86□□□□□ -0.51
PDLIM1-205ENST00000493949 MYH6P13533 1939 aa11.86□□□□□ -0.51
PDLIM1-205ENST00000493949 BAHCC1Q9P281 2608 aa11.85□□□□□ -0.51
PDLIM1-205ENST00000493949 LOC730098B7Z3J9 87 aa11.85□□□□□ -0.51
PDLIM1-205ENST00000493949 CPLX1O14810 134 aa11.85□□□□□ -0.51
PDLIM1-205ENST00000493949 RGS20O76081 388 aa11.85□□□□□ -0.51
PDLIM1-205ENST00000493949 TOP1P11387 765 aaKnown RBP11.85□□□□□ -0.51
PDLIM1-205ENST00000493949 PFKFB1P16118 471 aa11.85□□□□□ -0.51
PDLIM1-205ENST00000493949 ADD2P35612 726 aa11.85□□□□□ -0.51
PDLIM1-205ENST00000493949 UBASH3AP57075 661 aa11.85□□□□□ -0.51
PDLIM1-205ENST00000493949 DLX2Q07687 328 aaPredicted RBP11.85□□□□□ -0.51
PDLIM1-205ENST00000493949 PTGISQ16647 500 aa11.85□□□□□ -0.51
PDLIM1-205ENST00000493949 CTR9Q6PD62 1173 aa11.85□□□□□ -0.51
PDLIM1-205ENST00000493949 EP400NLQ6ZTU2 488 aa11.85□□□□□ -0.51
PDLIM1-205ENST00000493949 RALYLQ86SE5 291 aaKnown RBP11.85□□□□□ -0.51
PDLIM1-205ENST00000493949 MB21D2Q8IYB1 491 aaPredicted RBP11.85□□□□□ -0.51
PDLIM1-205ENST00000493949 MLKLQ8NB16 471 aa11.85□□□□□ -0.51
PDLIM1-205ENST00000493949 DHX38Q92620 1227 aaKnown RBP11.85□□□□□ -0.51
PDLIM1-205ENST00000493949 APPBP2Q92624 585 aa11.85□□□□□ -0.51
PDLIM1-205ENST00000493949 CCDC51Q96ER9 411 aa11.85□□□□□ -0.51
PDLIM1-205ENST00000493949 TMEM87BQ96K49 555 aa11.85□□□□□ -0.51
PDLIM1-205ENST00000493949 PURBQ96QR8 312 aaKnown RBP11.85□□□□□ -0.51
PDLIM1-205ENST00000493949 GBP3Q9H0R5 595 aa11.85□□□□□ -0.51
PDLIM1-205ENST00000493949 ZNF446Q9NWS9 450 aa11.85□□□□□ -0.51
PDLIM1-205ENST00000493949 TRMT1Q9NXH9 659 aaKnown RBP11.85□□□□□ -0.51
PDLIM1-205ENST00000493949 CYP39A1Q9NYL5 469 aa11.85□□□□□ -0.51
PDLIM1-205ENST00000493949 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.85□□□□□ -0.51
PDLIM1-205ENST00000493949 IGKV6D-41A0A0C4DH26 115 aa11.84□□□□□ -0.51
PDLIM1-205ENST00000493949 H0Y858 1186 aa11.84□□□□□ -0.51
PDLIM1-205ENST00000493949 NKRFO15226 690 aaKnown RBP eCLIP11.84□□□□□ -0.51
PDLIM1-205ENST00000493949 EYA4O95677 639 aa11.84□□□□□ -0.51
PDLIM1-205ENST00000493949 CKBP12277 381 aa11.84□□□□□ -0.51
PDLIM1-205ENST00000493949 FDPSP14324 419 aaKnown RBP11.84□□□□□ -0.51
PDLIM1-205ENST00000493949 CDK11BP21127 795 aaKnown RBP11.84□□□□□ -0.51
PDLIM1-205ENST00000493949 SNAP25P60880 206 aa11.84□□□□□ -0.51
PDLIM1-205ENST00000493949 HYAL1Q12794 435 aa11.84□□□□□ -0.51
PDLIM1-205ENST00000493949 TBX2Q13207 712 aaPredicted RBP11.84□□□□□ -0.51
PDLIM1-205ENST00000493949 ERCC6LQ2NKX8 1250 aa11.84□□□□□ -0.51
PDLIM1-205ENST00000493949 NT5DC1Q5TFE4 455 aa11.84□□□□□ -0.51
PDLIM1-205ENST00000493949 RESP18Q5W5W9 173 aa11.84□□□□□ -0.51
PDLIM1-205ENST00000493949 TRIM65Q6PJ69 517 aa11.84□□□□□ -0.51
PDLIM1-205ENST00000493949 AMOTL1Q8IY63 956 aa11.84□□□□□ -0.51
PDLIM1-205ENST00000493949 IQUBQ8NA54 791 aa11.84□□□□□ -0.51
PDLIM1-205ENST00000493949 OR6J1Q8NGC5 347 aa11.84□□□□□ -0.51
PDLIM1-205ENST00000493949 GOLGA1Q92805 767 aa11.84□□□□□ -0.51
PDLIM1-205ENST00000493949 EXOC4Q96A65 974 aa11.84□□□□□ -0.51
PDLIM1-205ENST00000493949 TRERF1Q96PN7 1200 aa11.84□□□□□ -0.51
PDLIM1-205ENST00000493949 PANX2Q96RD6 677 aa11.84□□□□□ -0.51
PDLIM1-205ENST00000493949 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.84□□□□□ -0.51
PDLIM1-205ENST00000493949 ARFGAP3Q9NP61 516 aa11.84□□□□□ -0.51
PDLIM1-205ENST00000493949 TLR9Q9NR96 1032 aa11.84□□□□□ -0.51
PDLIM1-205ENST00000493949 A0A1B0GVL5 298 aa11.83□□□□□ -0.52
PDLIM1-205ENST00000493949 GOLGA8BA8MQT2 603 aa11.83□□□□□ -0.52
PDLIM1-205ENST00000493949 TBX10O75333 385 aa11.83□□□□□ -0.52
PDLIM1-205ENST00000493949 ERLIN1O75477 346 aa11.83□□□□□ -0.52
PDLIM1-205ENST00000493949 EIF3JO75822 258 aaKnown RBP11.83□□□□□ -0.52
PDLIM1-205ENST00000493949 SERPINC1P01008 464 aa11.83□□□□□ -0.52
PDLIM1-205ENST00000493949 RASA1P20936 1047 aa11.83□□□□□ -0.52
PDLIM1-205ENST00000493949 CEBPZQ03701 1054 aaKnown RBP11.83□□□□□ -0.52
PDLIM1-205ENST00000493949 TRDNQ13061 729 aa11.83□□□□□ -0.52
PDLIM1-205ENST00000493949 TRIM29Q14134 588 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms