RNA–Protein interactions for RNA: ENST00000493647.1

RHBDF1-211, Transcript of rhomboid 5 homolog 1, humanhuman

TSL 3

Gene RHBDF1, Length 935 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1-211ENST00000493647 DHX38Q92620 1227 aaKnown RBP13.54□□□□□ -0.24
RHBDF1-211ENST00000493647 PCDH10Q9P2E7 1040 aa13.54□□□□□ -0.24
RHBDF1-211ENST00000493647 STK24Q9Y6E0 443 aa13.54□□□□□ -0.24
RHBDF1-211ENST00000493647 NRCAMQ92823 1304 aa13.54□□□□□ -0.24
RHBDF1-211ENST00000493647 COL1A2P08123 1366 aa13.54□□□□□ -0.24
RHBDF1-211ENST00000493647 RRN3P2A6NIE6 340 aa13.53□□□□□ -0.24
RHBDF1-211ENST00000493647 SLC26A4O43511 780 aa13.53□□□□□ -0.24
RHBDF1-211ENST00000493647 C22orf31O95567 290 aa13.53□□□□□ -0.24
RHBDF1-211ENST00000493647 CYP2C9P11712 490 aa13.53□□□□□ -0.24
RHBDF1-211ENST00000493647 RARRES1P49788 294 aa13.53□□□□□ -0.24
RHBDF1-211ENST00000493647 FAAP100Q0VG06 881 aa13.53□□□□□ -0.24
RHBDF1-211ENST00000493647 PTGISQ16647 500 aa13.53□□□□□ -0.24
RHBDF1-211ENST00000493647 TRIM71Q2Q1W2 868 aaKnown RBP13.53□□□□□ -0.24
RHBDF1-211ENST00000493647 XKR9Q5GH70 373 aa13.53□□□□□ -0.24
RHBDF1-211ENST00000493647 MTHFD1LQ6UB35 978 aa13.53□□□□□ -0.24
RHBDF1-211ENST00000493647 CLEC17AQ6ZS10 378 aa13.53□□□□□ -0.24
RHBDF1-211ENST00000493647 TOX2Q96NM4 488 aa13.53□□□□□ -0.24
RHBDF1-211ENST00000493647 NACC1Q96RE7 527 aa13.53□□□□□ -0.24
RHBDF1-211ENST00000493647 SEZ6LQ9BYH1 1024 aa13.53□□□□□ -0.24
RHBDF1-211ENST00000493647 PANK2Q9BZ23 570 aa13.53□□□□□ -0.24
RHBDF1-211ENST00000493647 CYP26B1Q9NR63 512 aa13.53□□□□□ -0.24
RHBDF1-211ENST00000493647 ANKEF1Q9NU02 776 aa13.53□□□□□ -0.24
RHBDF1-211ENST00000493647 BLOC1S4Q9NUP1 217 aa13.53□□□□□ -0.24
RHBDF1-211ENST00000493647 KDM3AQ9Y4C1 1321 aa13.53□□□□□ -0.24
RHBDF1-211ENST00000493647 XRCC6P12956 609 aaKnown RBP eCLIP13.52□□□□□ -0.25
RHBDF1-211ENST00000493647 KLRC1P26715 233 aa13.52□□□□□ -0.25
RHBDF1-211ENST00000493647 RGS19P49795 217 aa13.52□□□□□ -0.25
RHBDF1-211ENST00000493647 TPRNQ4KMQ1 711 aa13.52□□□□□ -0.25
RHBDF1-211ENST00000493647 NAALADL2Q58DX5 795 aa13.52□□□□□ -0.25
RHBDF1-211ENST00000493647 ADALQ6DHV7 355 aa13.52□□□□□ -0.25
RHBDF1-211ENST00000493647 SH3RF1Q7Z6J0 888 aa13.52□□□□□ -0.25
RHBDF1-211ENST00000493647 SERINC5Q86VE9 423 aa13.52□□□□□ -0.25
RHBDF1-211ENST00000493647 LINC01465Q8N7H1 131 aa13.52□□□□□ -0.25
RHBDF1-211ENST00000493647 TMEM87AQ8NBN3 555 aa13.52□□□□□ -0.25
RHBDF1-211ENST00000493647 CEP170P1Q96L14 293 aa13.52□□□□□ -0.25
RHBDF1-211ENST00000493647 GOLPH3LQ9H4A5 285 aa13.52□□□□□ -0.25
RHBDF1-211ENST00000493647 PDLIM7Q9NR12 457 aa13.52□□□□□ -0.25
RHBDF1-211ENST00000493647 TUBE1Q9UJT0 475 aa13.52□□□□□ -0.25
RHBDF1-211ENST00000493647 DBR1Q9UK59 544 aaKnown RBP13.52□□□□□ -0.25
RHBDF1-211ENST00000493647 WDR81Q562E7 1941 aa13.51□□□□□ -0.25
RHBDF1-211ENST00000493647 MROH7Q68CQ1 1323 aa13.51□□□□□ -0.25
RHBDF1-211ENST00000493647 IGKV6-21A0A0C4DH24 114 aa13.51□□□□□ -0.25
RHBDF1-211ENST00000493647 A0A1W2PQ27 194 aa13.51□□□□□ -0.25
RHBDF1-211ENST00000493647 A0A1W2PQ64 194 aa13.51□□□□□ -0.25
RHBDF1-211ENST00000493647 A0A1W2PQD8 194 aa13.51□□□□□ -0.25
RHBDF1-211ENST00000493647 TRIM43BA6NCK2 446 aa13.51□□□□□ -0.25
RHBDF1-211ENST00000493647 DCDC2CA8MYV0 355 aa13.51□□□□□ -0.25
RHBDF1-211ENST00000493647 GADD45BO75293 160 aaPredicted RBP13.51□□□□□ -0.25
RHBDF1-211ENST00000493647 EYA4O95677 639 aa13.51□□□□□ -0.25
RHBDF1-211ENST00000493647 CMA1P23946 247 aa13.51□□□□□ -0.25
RHBDF1-211ENST00000493647 MKRN4PQ13434 485 aaPredicted RBP13.51□□□□□ -0.25
RHBDF1-211ENST00000493647 E2F4Q16254 413 aa13.51□□□□□ -0.25
RHBDF1-211ENST00000493647 OTUD6AQ7L8S5 288 aa13.51□□□□□ -0.25
RHBDF1-211ENST00000493647 TRIM43Q96BQ3 446 aaPredicted RBP13.51□□□□□ -0.25
RHBDF1-211ENST00000493647 CALML4Q96GE6 196 aa13.51□□□□□ -0.25
RHBDF1-211ENST00000493647 CDK5RAP3Q96JB5 506 aa13.51□□□□□ -0.25
RHBDF1-211ENST00000493647 NT5C3AQ9H0P0 336 aa13.51□□□□□ -0.25
RHBDF1-211ENST00000493647 BHMT2Q9H2M3 363 aa13.51□□□□□ -0.25
RHBDF1-211ENST00000493647 DHX33Q9H6R0 707 aaKnown RBP13.51□□□□□ -0.25
RHBDF1-211ENST00000493647 XPNPEP1Q9NQW7 623 aa13.51□□□□□ -0.25
RHBDF1-211ENST00000493647 BMP2KQ9NSY1 1161 aaPredicted RBP13.51□□□□□ -0.25
RHBDF1-211ENST00000493647 TBX21Q9UL17 535 aa13.51□□□□□ -0.25
RHBDF1-211ENST00000493647 DNM3Q9UQ16 869 aa13.51□□□□□ -0.25
RHBDF1-211ENST00000493647 HPSEQ9Y251 543 aa13.51□□□□□ -0.25
RHBDF1-211ENST00000493647 ALPK3Q96L96 1907 aa13.51□□□□□ -0.25
RHBDF1-211ENST00000493647 UMODL1Q5DID0 1318 aa13.5□□□□□ -0.25
RHBDF1-211ENST00000493647 FAM237AA0A1B0GTK4 181 aa13.5□□□□□ -0.25
RHBDF1-211ENST00000493647 A0A1B0GVL5 298 aa13.5□□□□□ -0.25
RHBDF1-211ENST00000493647 TLR3O15455 904 aaKnown RBP13.5□□□□□ -0.25
RHBDF1-211ENST00000493647 MAFO75444 373 aaPredicted RBP13.5□□□□□ -0.25
RHBDF1-211ENST00000493647 CLTBP09497 229 aa13.5□□□□□ -0.25
RHBDF1-211ENST00000493647 PLA2G4BP0C869 781 aa13.5□□□□□ -0.25
RHBDF1-211ENST00000493647 GNAT1P11488 350 aa13.5□□□□□ -0.25
RHBDF1-211ENST00000493647 PFKFB1P16118 471 aa13.5□□□□□ -0.25
RHBDF1-211ENST00000493647 CLCN3P51790 818 aa13.5□□□□□ -0.25
RHBDF1-211ENST00000493647 SLC12A3P55017 1021 aa13.5□□□□□ -0.25
RHBDF1-211ENST00000493647 TBC1D8BQ0IIM8 1120 aa13.5□□□□□ -0.25
RHBDF1-211ENST00000493647 PTK7Q13308 1070 aa13.5□□□□□ -0.25
RHBDF1-211ENST00000493647 DRP2Q13474 957 aa13.5□□□□□ -0.25
RHBDF1-211ENST00000493647 MCM6Q14566 821 aa13.5□□□□□ -0.25
RHBDF1-211ENST00000493647 C7orf61Q8IZ16 206 aa13.5□□□□□ -0.25
RHBDF1-211ENST00000493647 KIAA0319LQ8IZA0 1049 aa13.5□□□□□ -0.25
RHBDF1-211ENST00000493647 LRRC71Q8N4P6 559 aa13.5□□□□□ -0.25
RHBDF1-211ENST00000493647 PDILTQ8N807 584 aa13.5□□□□□ -0.25
RHBDF1-211ENST00000493647 FSIP1Q8NA03 581 aa13.5□□□□□ -0.25
RHBDF1-211ENST00000493647 RAD54LQ92698 747 aa13.5□□□□□ -0.25
RHBDF1-211ENST00000493647 HTATIP2Q9BUP3 242 aa13.5□□□□□ -0.25
RHBDF1-211ENST00000493647 NOC4LQ9BVI4 516 aaKnown RBP13.5□□□□□ -0.25
RHBDF1-211ENST00000493647 RUSC1Q9BVN2 902 aa13.5□□□□□ -0.25
RHBDF1-211ENST00000493647 CCDC39Q9UFE4 941 aa13.5□□□□□ -0.25
RHBDF1-211ENST00000493647 PCDHA2Q9Y5H9 948 aa13.5□□□□□ -0.25
RHBDF1-211ENST00000493647 TCHHQ07283 1943 aa13.5□□□□□ -0.25
RHBDF1-211ENST00000493647 MYH9P35579 1960 aaKnown RBP13.49□□□□□ -0.25
RHBDF1-211ENST00000493647 SMIM35A0A1B0GVV1 85 aa13.49□□□□□ -0.25
RHBDF1-211ENST00000493647 ARHGEF35A5YM69 484 aa13.49□□□□□ -0.25
RHBDF1-211ENST00000493647 MAGEB2O15479 319 aa13.49□□□□□ -0.25
RHBDF1-211ENST00000493647 USO1O60763 962 aaKnown RBP13.49□□□□□ -0.25
RHBDF1-211ENST00000493647 ITGB8P26012 769 aa13.49□□□□□ -0.25
RHBDF1-211ENST00000493647 TXLNAP40222 546 aa13.49□□□□□ -0.25
RHBDF1-211ENST00000493647 RFC5P40937 340 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms