RNA–Protein interactions for RNA: ENST00000493468.6

PRPF40A-211, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 1 (best)

Gene PRPF40A, Length 1,043 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-211ENST00000493468 ID4P47928 161 aa16.33■□□□□ 0.2
PRPF40A-211ENST00000493468 CLCN5P51795 746 aa16.33■□□□□ 0.2
PRPF40A-211ENST00000493468 ITIH3Q06033 890 aa16.33■□□□□ 0.2
PRPF40A-211ENST00000493468 PLCB4Q15147 1175 aa16.33■□□□□ 0.2
PRPF40A-211ENST00000493468 TMEM266Q2M3C6 531 aa16.33■□□□□ 0.2
PRPF40A-211ENST00000493468 PLPP4Q5VZY2 271 aa16.33■□□□□ 0.2
PRPF40A-211ENST00000493468 PLPPR4Q7Z2D5 763 aa16.33■□□□□ 0.2
PRPF40A-211ENST00000493468 MAP3K14Q99558 947 aa16.33■□□□□ 0.2
PRPF40A-211ENST00000493468 TCF25Q9BQ70 676 aa16.33■□□□□ 0.2
PRPF40A-211ENST00000493468 ELAC1Q9H777 363 aaKnown RBP16.33■□□□□ 0.2
PRPF40A-211ENST00000493468 DENND3A2RUS2 1198 aa16.32■□□□□ 0.2
PRPF40A-211ENST00000493468 PPM1AP35813 382 aa16.32■□□□□ 0.2
PRPF40A-211ENST00000493468 NFX1Q12986 1120 aaKnown RBP16.32■□□□□ 0.2
PRPF40A-211ENST00000493468 WTAPQ15007 396 aa16.32■□□□□ 0.2
PRPF40A-211ENST00000493468 SART3Q15020 963 aaKnown RBP16.32■□□□□ 0.2
PRPF40A-211ENST00000493468 FAM102BQ5T8I3 360 aa16.32■□□□□ 0.2
PRPF40A-211ENST00000493468 MTHFD1LQ6UB35 978 aa16.32■□□□□ 0.2
PRPF40A-211ENST00000493468 RRP36Q96EU6 259 aaKnown RBP16.32■□□□□ 0.2
PRPF40A-211ENST00000493468 ADAM2Q99965 735 aa16.32■□□□□ 0.2
PRPF40A-211ENST00000493468 ADAM7Q9H2U9 754 aa16.32■□□□□ 0.2
PRPF40A-211ENST00000493468 POMKQ9H5K3 350 aa16.32■□□□□ 0.2
PRPF40A-211ENST00000493468 SENP2Q9HC62 589 aa16.32■□□□□ 0.2
PRPF40A-211ENST00000493468 JADE2Q9NQC1 790 aa16.32■□□□□ 0.2
PRPF40A-211ENST00000493468 ENTPD7Q9NQZ7 604 aa16.32■□□□□ 0.2
PRPF40A-211ENST00000493468 TMEM161AQ9NX61 479 aa16.32■□□□□ 0.2
PRPF40A-211ENST00000493468 SLC9A2Q9UBY0 812 aa16.32■□□□□ 0.2
PRPF40A-211ENST00000493468 NFASCO94856 1347 aa16.31■□□□□ 0.2
PRPF40A-211ENST00000493468 HIDE1A8MVS5 230 aa16.31■□□□□ 0.2
PRPF40A-211ENST00000493468 C2CD4DB7Z1M9 353 aa16.31■□□□□ 0.2
PRPF40A-211ENST00000493468 RPS6KA5O75582 802 aa16.31■□□□□ 0.2
PRPF40A-211ENST00000493468 SP100P23497 879 aaPredicted RBP16.31■□□□□ 0.2
PRPF40A-211ENST00000493468 PDE4AP27815 886 aa16.31■□□□□ 0.2
PRPF40A-211ENST00000493468 SLC26A2P50443 739 aa16.31■□□□□ 0.2
PRPF40A-211ENST00000493468 FAM189BP81408 668 aa16.31■□□□□ 0.2
PRPF40A-211ENST00000493468 CES5AQ6NT32 575 aa16.31■□□□□ 0.2
PRPF40A-211ENST00000493468 FRMD5Q7Z6J6 570 aa16.31■□□□□ 0.2
PRPF40A-211ENST00000493468 CATIPQ7Z7H3 387 aa16.31■□□□□ 0.2
PRPF40A-211ENST00000493468 PLEKHM2Q8IWE5 1019 aa16.31■□□□□ 0.2
PRPF40A-211ENST00000493468 ZDHHC14Q8IZN3 488 aa16.31■□□□□ 0.2
PRPF40A-211ENST00000493468 TRAPPC12Q8WVT3 735 aa16.31■□□□□ 0.2
PRPF40A-211ENST00000493468 ATP6V0A4Q9HBG4 840 aa16.31■□□□□ 0.2
PRPF40A-211ENST00000493468 TSHZ2Q9NRE2 1034 aa16.31■□□□□ 0.2
PRPF40A-211ENST00000493468 HCSTQ9UBK5 93 aa16.31■□□□□ 0.2
PRPF40A-211ENST00000493468 SEC63Q9UGP8 760 aaKnown RBP16.31■□□□□ 0.2
PRPF40A-211ENST00000493468 NOC2LQ9Y3T9 749 aaKnown RBP16.31■□□□□ 0.2
PRPF40A-211ENST00000493468 GPR182O15218 404 aa16.3■□□□□ 0.2
PRPF40A-211ENST00000493468 MTHFRP42898 656 aa16.3■□□□□ 0.2
PRPF40A-211ENST00000493468 STAT5BP51692 787 aa16.3■□□□□ 0.2
PRPF40A-211ENST00000493468 APOBRQ0VD83 1088 aa16.3■□□□□ 0.2
PRPF40A-211ENST00000493468 LLGL2Q6P1M3 1020 aa16.3■□□□□ 0.2
PRPF40A-211ENST00000493468 TMEM40Q8WWA1 233 aa16.3■□□□□ 0.2
PRPF40A-211ENST00000493468 PIBF1Q8WXW3 757 aa16.3■□□□□ 0.2
PRPF40A-211ENST00000493468 APOL5Q9BWW9 433 aa16.3■□□□□ 0.2
PRPF40A-211ENST00000493468 TMEM117Q9H0C3 514 aa16.3■□□□□ 0.2
PRPF40A-211ENST00000493468 PSTPIP2Q9H939 334 aa16.3■□□□□ 0.2
PRPF40A-211ENST00000493468 PKD2L1Q9P0L9 805 aa16.3■□□□□ 0.2
PRPF40A-211ENST00000493468 ST3GAL5Q9UNP4 418 aa16.3■□□□□ 0.2
PRPF40A-211ENST00000493468 DMXL1Q9Y485 3027 aa16.29■□□□□ 0.2
PRPF40A-211ENST00000493468 WDR87Q6ZQQ6 2873 aa16.29■□□□□ 0.2
PRPF40A-211ENST00000493468 COL1A2P08123 1366 aa16.29■□□□□ 0.2
PRPF40A-211ENST00000493468 HOXA2O43364 376 aa16.29■□□□□ 0.2
PRPF40A-211ENST00000493468 DDAH1O94760 285 aa16.29■□□□□ 0.2
PRPF40A-211ENST00000493468 KIF5BP33176 963 aa16.29■□□□□ 0.2
PRPF40A-211ENST00000493468 ACTR2P61160 394 aa16.29■□□□□ 0.2
PRPF40A-211ENST00000493468 KRT17Q04695 432 aa16.29■□□□□ 0.2
PRPF40A-211ENST00000493468 KCNT2Q6UVM3 1135 aa16.29■□□□□ 0.2
PRPF40A-211ENST00000493468 SMC5Q8IY18 1101 aa16.29■□□□□ 0.2
PRPF40A-211ENST00000493468 ADSSL1Q8N142 457 aa16.29■□□□□ 0.2
PRPF40A-211ENST00000493468 LRRC43Q8N309 656 aa16.29■□□□□ 0.2
PRPF40A-211ENST00000493468 ZNF558Q96NG5 402 aa16.29■□□□□ 0.2
PRPF40A-211ENST00000493468 LZTS2Q9BRK4 669 aa16.29■□□□□ 0.2
PRPF40A-211ENST00000493468 USTQ9Y2C2 406 aa16.29■□□□□ 0.2
PRPF40A-211ENST00000493468 HCFC2Q9Y5Z7 792 aa16.29■□□□□ 0.2
PRPF40A-211ENST00000493468 U3KPZ7 1027 aaPredicted RBP16.29■□□□□ 0.2
PRPF40A-211ENST00000493468 MYH9P35579 1960 aaKnown RBP16.28■□□□□ 0.2
PRPF40A-211ENST00000493468 SPDYE3A6NKU9 549 aa16.28■□□□□ 0.2
PRPF40A-211ENST00000493468 ATG7O95352 703 aa16.28■□□□□ 0.2
PRPF40A-211ENST00000493468 CYP21A2P08686 494 aa16.28■□□□□ 0.2
PRPF40A-211ENST00000493468 FGFR1P11362 822 aa16.28■□□□□ 0.2
PRPF40A-211ENST00000493468 IBSPP21815 317 aaPredicted RBP16.28■□□□□ 0.2
PRPF40A-211ENST00000493468 SMC1AQ14683 1233 aaKnown RBP16.28■□□□□ 0.2
PRPF40A-211ENST00000493468 KIAA1841Q6NSI8 718 aa16.28■□□□□ 0.2
PRPF40A-211ENST00000493468 RALYLQ86SE5 291 aaKnown RBP16.28■□□□□ 0.2
PRPF40A-211ENST00000493468 KIAA0319LQ8IZA0 1049 aa16.28■□□□□ 0.2
PRPF40A-211ENST00000493468 PLCD3Q8N3E9 789 aa16.28■□□□□ 0.2
PRPF40A-211ENST00000493468 TDRD5Q8NAT2 981 aaKnown RBP16.28■□□□□ 0.2
PRPF40A-211ENST00000493468 CTCFLQ8NI51 663 aaPredicted RBP16.28■□□□□ 0.2
PRPF40A-211ENST00000493468 SDF4Q9BRK5 362 aa16.28■□□□□ 0.2
PRPF40A-211ENST00000493468 IL25Q9H293 177 aa16.28■□□□□ 0.2
PRPF40A-211ENST00000493468 MFSD1Q9H3U5 465 aa16.28■□□□□ 0.2
PRPF40A-211ENST00000493468 KCNH7Q9NS40 1196 aa16.28■□□□□ 0.2
PRPF40A-211ENST00000493468 CDH22Q9UJ99 828 aa16.28■□□□□ 0.2
PRPF40A-211ENST00000493468 EP300Q09472 2414 aaPredicted RBP16.28■□□□□ 0.2
PRPF40A-211ENST00000493468 IGKV6D-21A0A0A0MT36 114 aa16.27■□□□□ 0.2
PRPF40A-211ENST00000493468 C2orf71A6NGG8 1288 aa16.27■□□□□ 0.2
PRPF40A-211ENST00000493468 HBP1O60381 514 aa16.27■□□□□ 0.2
PRPF40A-211ENST00000493468 KLRC1P26715 233 aa16.27■□□□□ 0.2
PRPF40A-211ENST00000493468 CRYBB1P53674 252 aaPredicted RBP16.27■□□□□ 0.2
PRPF40A-211ENST00000493468 DSC3Q14574 896 aa16.27■□□□□ 0.2
PRPF40A-211ENST00000493468 DIEXFQ68CQ4 756 aaKnown RBP16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms