RNA–Protein interactions for RNA: ENST00000492858.6

GPNMB-214, Transcript of glycoprotein nmb, humanhuman

TSL 5

Gene GPNMB, Length 721 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-214ENST00000492858 CWH43Q9H720 699 aa13.86□□□□□ -0.19
GPNMB-214ENST00000492858 ERVK-5Q9HDB9 667 aa13.86□□□□□ -0.19
GPNMB-214ENST00000492858 RNF216Q9NWF9 866 aaPredicted RBP13.86□□□□□ -0.19
GPNMB-214ENST00000492858 PKD2L1Q9P0L9 805 aa13.86□□□□□ -0.19
GPNMB-214ENST00000492858 GINS2Q9Y248 185 aa13.86□□□□□ -0.19
GPNMB-214ENST00000492858 PCDHA2Q9Y5H9 948 aa13.86□□□□□ -0.19
GPNMB-214ENST00000492858 CYTH3O43739 400 aa13.85□□□□□ -0.19
GPNMB-214ENST00000492858 LMNAP02545 664 aaKnown RBP13.85□□□□□ -0.19
GPNMB-214ENST00000492858 ARP10275 920 aa13.85□□□□□ -0.19
GPNMB-214ENST00000492858 FGFR1P11362 822 aa13.85□□□□□ -0.19
GPNMB-214ENST00000492858 AOC1P19801 751 aa13.85□□□□□ -0.19
GPNMB-214ENST00000492858 ANKRD45Q5TZF3 282 aa13.85□□□□□ -0.19
GPNMB-214ENST00000492858 USP17L6PQ6QN14 398 aa13.85□□□□□ -0.19
GPNMB-214ENST00000492858 SLC24A5Q71RS6 500 aa13.85□□□□□ -0.19
GPNMB-214ENST00000492858 DTWD2Q8NBA8 298 aa13.85□□□□□ -0.19
GPNMB-214ENST00000492858 SMARCC2Q8TAQ2 1214 aa13.85□□□□□ -0.19
GPNMB-214ENST00000492858 PIBF1Q8WXW3 757 aa13.85□□□□□ -0.19
GPNMB-214ENST00000492858 GPRASP2Q96D09 838 aa13.85□□□□□ -0.19
GPNMB-214ENST00000492858 CDHR1Q96JP9 859 aa13.85□□□□□ -0.19
GPNMB-214ENST00000492858 ATP6V0A4Q9HBG4 840 aa13.85□□□□□ -0.19
GPNMB-214ENST00000492858 RGS18Q9NS28 235 aa13.85□□□□□ -0.19
GPNMB-214ENST00000492858 C1orf112Q9NSG2 853 aa13.85□□□□□ -0.19
GPNMB-214ENST00000492858 KDM3AQ9Y4C1 1321 aa13.85□□□□□ -0.19
GPNMB-214ENST00000492858 MYO10Q9HD67 2058 aa13.84□□□□□ -0.19
GPNMB-214ENST00000492858 C9IYK1 514 aa13.84□□□□□ -0.19
GPNMB-214ENST00000492858 RPS6KA5O75582 802 aa13.84□□□□□ -0.19
GPNMB-214ENST00000492858 NPR3P17342 541 aa13.84□□□□□ -0.19
GPNMB-214ENST00000492858 PDE4AP27815 886 aa13.84□□□□□ -0.19
GPNMB-214ENST00000492858 PBX3P40426 434 aa13.84□□□□□ -0.19
GPNMB-214ENST00000492858 PUM1Q14671 1186 aaKnown RBP eCLIP13.84□□□□□ -0.19
GPNMB-214ENST00000492858 GRM4Q14833 912 aa13.84□□□□□ -0.19
GPNMB-214ENST00000492858 SEC23AQ15436 765 aa13.84□□□□□ -0.19
GPNMB-214ENST00000492858 IMMTQ16891 758 aaKnown RBP13.84□□□□□ -0.19
GPNMB-214ENST00000492858 RARS2Q5T160 578 aaKnown RBP13.84□□□□□ -0.19
GPNMB-214ENST00000492858 KCNT2Q6UVM3 1135 aa13.84□□□□□ -0.19
GPNMB-214ENST00000492858 PLCD3Q8N3E9 789 aa13.84□□□□□ -0.19
GPNMB-214ENST00000492858 CUL5Q93034 780 aa13.84□□□□□ -0.19
GPNMB-214ENST00000492858 RILPL2Q969X0 211 aa13.84□□□□□ -0.19
GPNMB-214ENST00000492858 PCYT2Q99447 389 aa13.84□□□□□ -0.19
GPNMB-214ENST00000492858 CNNM2Q9H8M5 875 aa13.84□□□□□ -0.19
GPNMB-214ENST00000492858 DBR1Q9UK59 544 aaKnown RBP13.84□□□□□ -0.19
GPNMB-214ENST00000492858 NOC2LQ9Y3T9 749 aaKnown RBP13.84□□□□□ -0.19
GPNMB-214ENST00000492858 SMIM35A0A1B0GVV1 85 aa13.83□□□□□ -0.2
GPNMB-214ENST00000492858 CA8P35219 290 aa13.83□□□□□ -0.2
GPNMB-214ENST00000492858 KRT17Q04695 432 aa13.83□□□□□ -0.2
GPNMB-214ENST00000492858 SMC1AQ14683 1233 aaKnown RBP13.83□□□□□ -0.2
GPNMB-214ENST00000492858 PLCB4Q15147 1175 aa13.83□□□□□ -0.2
GPNMB-214ENST00000492858 KIAA1841Q6NSI8 718 aa13.83□□□□□ -0.2
GPNMB-214ENST00000492858 NME8Q8N427 588 aa13.83□□□□□ -0.2
GPNMB-214ENST00000492858 C12orf76Q8N812 135 aaPredicted RBP13.83□□□□□ -0.2
GPNMB-214ENST00000492858 MRPL43Q8N983 215 aaKnown RBP13.83□□□□□ -0.2
GPNMB-214ENST00000492858 TNPO1Q92973 898 aaKnown RBP13.83□□□□□ -0.2
GPNMB-214ENST00000492858 ZNF558Q96NG5 402 aa13.83□□□□□ -0.2
GPNMB-214ENST00000492858 CNTNAP3BQ96NU0 1288 aa13.83□□□□□ -0.2
GPNMB-214ENST00000492858 HINFPQ9BQA5 517 aa13.83□□□□□ -0.2
GPNMB-214ENST00000492858 RTP3Q9BQQ7 232 aa13.83□□□□□ -0.2
GPNMB-214ENST00000492858 CNTNAP3Q9BZ76 1288 aa13.83□□□□□ -0.2
GPNMB-214ENST00000492858 SEMA4AQ9H3S1 761 aa13.83□□□□□ -0.2
GPNMB-214ENST00000492858 AZI2Q9H6S1 392 aa13.83□□□□□ -0.2
GPNMB-214ENST00000492858 CDHR5Q9HBB8 845 aa13.83□□□□□ -0.2
GPNMB-214ENST00000492858 TMEM161AQ9NX61 479 aa13.83□□□□□ -0.2
GPNMB-214ENST00000492858 R4GN57 208 aa13.83□□□□□ -0.2
GPNMB-214ENST00000492858 CFAP47Q6ZTR5 3102 aa13.83□□□□□ -0.2
GPNMB-214ENST00000492858 FNDC1Q4ZHG4 1894 aaPredicted RBP13.82□□□□□ -0.2
GPNMB-214ENST00000492858 KMT2BQ9UMN6 2715 aaPredicted RBP13.82□□□□□ -0.2
GPNMB-214ENST00000492858 C2orf71A6NGG8 1288 aa13.82□□□□□ -0.2
GPNMB-214ENST00000492858 MEIS2O14770 477 aa13.82□□□□□ -0.2
GPNMB-214ENST00000492858 CLASP2O75122 1294 aaKnown RBP13.82□□□□□ -0.2
GPNMB-214ENST00000492858 EOMESO95936 686 aa13.82□□□□□ -0.2
GPNMB-214ENST00000492858 ITGB5P18084 799 aa13.82□□□□□ -0.2
GPNMB-214ENST00000492858 SDSP20132 328 aa13.82□□□□□ -0.2
GPNMB-214ENST00000492858 PPM1AP35813 382 aa13.82□□□□□ -0.2
GPNMB-214ENST00000492858 MTMR1Q13613 665 aa13.82□□□□□ -0.2
GPNMB-214ENST00000492858 KANK3Q6NY19 840 aa13.82□□□□□ -0.2
GPNMB-214ENST00000492858 MTHFD1LQ6UB35 978 aa13.82□□□□□ -0.2
GPNMB-214ENST00000492858 LRRC55Q6ZSA7 311 aa13.82□□□□□ -0.2
GPNMB-214ENST00000492858 CYB5R4Q7L1T6 521 aa13.82□□□□□ -0.2
GPNMB-214ENST00000492858 TMEM40Q8WWA1 233 aa13.82□□□□□ -0.2
GPNMB-214ENST00000492858 TMEM117Q9H0C3 514 aa13.82□□□□□ -0.2
GPNMB-214ENST00000492858 SPG21Q9NZD8 308 aa13.82□□□□□ -0.2
GPNMB-214ENST00000492858 FBXL21Q9UKT6 434 aa13.82□□□□□ -0.2
GPNMB-214ENST00000492858 ST3GAL5Q9UNP4 418 aa13.82□□□□□ -0.2
GPNMB-214ENST00000492858 USTQ9Y2C2 406 aa13.82□□□□□ -0.2
GPNMB-214ENST00000492858 LAMA4Q16363 1823 aa13.82□□□□□ -0.2
GPNMB-214ENST00000492858 TPRP12270 2363 aaKnown RBP13.81□□□□□ -0.2
GPNMB-214ENST00000492858 PIK3CDO00329 1044 aa13.81□□□□□ -0.2
GPNMB-214ENST00000492858 FAM189BP81408 668 aa13.81□□□□□ -0.2
GPNMB-214ENST00000492858 ATAT1Q5SQI0 421 aa13.81□□□□□ -0.2
GPNMB-214ENST00000492858 ODR4Q5SWX8 454 aa13.81□□□□□ -0.2
GPNMB-214ENST00000492858 CWC27Q6UX04 472 aaKnown RBP13.81□□□□□ -0.2
GPNMB-214ENST00000492858 FAM43BQ6ZT52 329 aaPredicted RBP13.81□□□□□ -0.2
GPNMB-214ENST00000492858 SIX5Q8N196 739 aa13.81□□□□□ -0.2
GPNMB-214ENST00000492858 CYP2W1Q8TAV3 490 aa13.81□□□□□ -0.2
GPNMB-214ENST00000492858 CASD1Q96PB1 797 aa13.81□□□□□ -0.2
GPNMB-214ENST00000492858 JPH1Q9HDC5 661 aaPredicted RBP13.81□□□□□ -0.2
GPNMB-214ENST00000492858 CYP26B1Q9NR63 512 aa13.81□□□□□ -0.2
GPNMB-214ENST00000492858 DZANK1Q9NVP4 752 aa13.81□□□□□ -0.2
GPNMB-214ENST00000492858 BAZ2BQ9UIF8 2168 aaKnown RBP13.81□□□□□ -0.2
GPNMB-214ENST00000492858 CEP250Q9BV73 2442 aa13.8□□□□□ -0.2
GPNMB-214ENST00000492858 STK25O00506 426 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms