RNA–Protein interactions for RNA: ENST00000492606.1

UBR4-215, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 314 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-215ENST00000492606 DPP9Q86TI2 863 aa5.13□□□□□ -1.59
UBR4-215ENST00000492606 TMEM192Q8IY95 271 aa5.13□□□□□ -1.59
UBR4-215ENST00000492606 FAM151AQ8WW52 585 aa5.13□□□□□ -1.59
UBR4-215ENST00000492606 NELL1Q92832 810 aa5.13□□□□□ -1.59
UBR4-215ENST00000492606 GTPBP3Q969Y2 492 aaKnown RBP5.13□□□□□ -1.59
UBR4-215ENST00000492606 HHIPQ96QV1 700 aa5.13□□□□□ -1.59
UBR4-215ENST00000492606 CRBNQ96SW2 442 aa5.13□□□□□ -1.59
UBR4-215ENST00000492606 MDFIQ99750 246 aa5.13□□□□□ -1.59
UBR4-215ENST00000492606 ZKSCAN3Q9BRR0 538 aa5.13□□□□□ -1.59
UBR4-215ENST00000492606 FTOQ9C0B1 505 aaKnown RBP eCLIP5.13□□□□□ -1.59
UBR4-215ENST00000492606 SRCIN1Q9C0H9 1055 aa5.13□□□□□ -1.59
UBR4-215ENST00000492606 CDH22Q9UJ99 828 aa5.13□□□□□ -1.59
UBR4-215ENST00000492606 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.13□□□□□ -1.59
UBR4-215ENST00000492606 LEMD3Q9Y2U8 911 aa5.13□□□□□ -1.59
UBR4-215ENST00000492606 PCDHGB7Q9Y5F8 929 aa5.13□□□□□ -1.59
UBR4-215ENST00000492606 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.13□□□□□ -1.59
UBR4-215ENST00000492606 SDK1Q7Z5N4 2213 aa5.13□□□□□ -1.59
UBR4-215ENST00000492606 SPTBN1Q01082 2364 aaKnown RBP5.13□□□□□ -1.59
UBR4-215ENST00000492606 ZNFX1Q9P2E3 1918 aaKnown RBP5.13□□□□□ -1.59
UBR4-215ENST00000492606 TANC1Q9C0D5 1861 aa5.12□□□□□ -1.59
UBR4-215ENST00000492606 ANKHD1Q8IWZ3 2542 aaKnown RBP5.12□□□□□ -1.59
UBR4-215ENST00000492606 H7C1W4 665 aa5.12□□□□□ -1.59
UBR4-215ENST00000492606 PPFIA3O75145 1194 aa5.12□□□□□ -1.59
UBR4-215ENST00000492606 GADD45BO75293 160 aaPredicted RBP5.12□□□□□ -1.59
UBR4-215ENST00000492606 LRRN2O75325 713 aa5.12□□□□□ -1.59
UBR4-215ENST00000492606 BAIAP3O94812 1187 aa5.12□□□□□ -1.59
UBR4-215ENST00000492606 ADORA2AP29274 412 aa5.12□□□□□ -1.59
UBR4-215ENST00000492606 GRIA4P48058 902 aa5.12□□□□□ -1.59
UBR4-215ENST00000492606 CAMK1Q14012 370 aa5.12□□□□□ -1.59
UBR4-215ENST00000492606 LAPTM4AQ15012 233 aa5.12□□□□□ -1.59
UBR4-215ENST00000492606 HSP90AB3PQ58FF7 597 aa5.12□□□□□ -1.59
UBR4-215ENST00000492606 MFSD14BQ5SR56 506 aa5.12□□□□□ -1.59
UBR4-215ENST00000492606 LAIR1Q6GTX8 287 aa5.12□□□□□ -1.59
UBR4-215ENST00000492606 CCNJLQ8IV13 435 aa5.12□□□□□ -1.59
UBR4-215ENST00000492606 EFHBQ8N7U6 833 aa5.12□□□□□ -1.59
UBR4-215ENST00000492606 SREK1Q8WXA9 508 aaKnown RBP5.12□□□□□ -1.59
UBR4-215ENST00000492606 LIN37Q96GY3 246 aaPredicted RBP5.12□□□□□ -1.59
UBR4-215ENST00000492606 GMCL1Q96IK5 515 aa5.12□□□□□ -1.59
UBR4-215ENST00000492606 TESK2Q96S53 571 aa5.12□□□□□ -1.59
UBR4-215ENST00000492606 TRIM56Q9BRZ2 755 aaKnown RBP5.12□□□□□ -1.59
UBR4-215ENST00000492606 DZANK1Q9NVP4 752 aa5.12□□□□□ -1.59
UBR4-215ENST00000492606 ZSCAN32Q9NX65 697 aa5.12□□□□□ -1.59
UBR4-215ENST00000492606 NXF1Q9UBU9 619 aaKnown RBP5.12□□□□□ -1.59
UBR4-215ENST00000492606 KLF15Q9UIH9 416 aa5.12□□□□□ -1.59
UBR4-215ENST00000492606 ATXN7L1Q9ULK2 861 aaPredicted RBP5.12□□□□□ -1.59
UBR4-215ENST00000492606 HCFC2Q9Y5Z7 792 aa5.12□□□□□ -1.59
UBR4-215ENST00000492606 ROBO3Q96MS0 1386 aa5.12□□□□□ -1.59
UBR4-215ENST00000492606 CABIN1Q9Y6J0 2220 aa5.12□□□□□ -1.59
UBR4-215ENST00000492606 TSC2P49815 1807 aa5.11□□□□□ -1.59
UBR4-215ENST00000492606 DOCK2Q92608 1830 aa5.11□□□□□ -1.59
UBR4-215ENST00000492606 GREB1Q4ZG55 1949 aa5.11□□□□□ -1.59
UBR4-215ENST00000492606 TRIP12Q14669 1992 aaPredicted RBP5.11□□□□□ -1.59
UBR4-215ENST00000492606 HIVEP3Q5T1R4 2406 aa5.11□□□□□ -1.59
UBR4-215ENST00000492606 TMEM238LA0A1B0GVL6 79 aa5.11□□□□□ -1.59
UBR4-215ENST00000492606 CTAGE5O15320 804 aa5.11□□□□□ -1.59
UBR4-215ENST00000492606 ADCY6O43306 1168 aa5.11□□□□□ -1.59
UBR4-215ENST00000492606 FGFR3P22607 806 aa5.11□□□□□ -1.59
UBR4-215ENST00000492606 CST5P28325 142 aaPredicted RBP5.11□□□□□ -1.59
UBR4-215ENST00000492606 CSTF1Q05048 431 aaKnown RBP5.11□□□□□ -1.59
UBR4-215ENST00000492606 NFIAQ12857 509 aa5.11□□□□□ -1.59
UBR4-215ENST00000492606 SERINC3Q13530 473 aa5.11□□□□□ -1.59
UBR4-215ENST00000492606 LY6DQ14210 128 aa5.11□□□□□ -1.59
UBR4-215ENST00000492606 GPNMBQ14956 572 aa5.11□□□□□ -1.59
UBR4-215ENST00000492606 SF3A2Q15428 464 aaKnown RBP5.11□□□□□ -1.59
UBR4-215ENST00000492606 NFXL1Q6ZNB6 911 aa5.11□□□□□ -1.59
UBR4-215ENST00000492606 DHX32Q7L7V1 743 aaKnown RBP5.11□□□□□ -1.59
UBR4-215ENST00000492606 LSM14AQ8ND56 463 aaKnown RBP5.11□□□□□ -1.59
UBR4-215ENST00000492606 SHCBP1Q8NEM2 672 aa5.11□□□□□ -1.59
UBR4-215ENST00000492606 VN1R2Q8NFZ6 395 aa5.11□□□□□ -1.59
UBR4-215ENST00000492606 BHMTQ93088 406 aa5.11□□□□□ -1.59
UBR4-215ENST00000492606 MAML3Q96JK9 1138 aa5.11□□□□□ -1.59
UBR4-215ENST00000492606 DRC1Q96MC2 740 aa5.11□□□□□ -1.59
UBR4-215ENST00000492606 ISCA1Q9BUE6 129 aa5.11□□□□□ -1.59
UBR4-215ENST00000492606 KRTAP17-1Q9BYP8 105 aa5.11□□□□□ -1.59
UBR4-215ENST00000492606 BCL11AQ9H165 835 aa5.11□□□□□ -1.59
UBR4-215ENST00000492606 S1PR5Q9H228 398 aa5.11□□□□□ -1.59
UBR4-215ENST00000492606 MIS18AQ9NYP9 233 aa5.11□□□□□ -1.59
UBR4-215ENST00000492606 TMOD2Q9NZR1 351 aa5.11□□□□□ -1.59
UBR4-215ENST00000492606 MICAL3Q7RTP6 2002 aa5.11□□□□□ -1.59
UBR4-215ENST00000492606 DOCK8Q8NF50 2099 aa5.11□□□□□ -1.59
UBR4-215ENST00000492606 CACNA1EQ15878 2313 aa5.11□□□□□ -1.59
UBR4-215ENST00000492606 CELSR2Q9HCU4 2923 aa5.1□□□□□ -1.59
UBR4-215ENST00000492606 METTL12A8MUP2 240 aa5.1□□□□□ -1.59
UBR4-215ENST00000492606 J3QW42 95 aa5.1□□□□□ -1.59
UBR4-215ENST00000492606 WDR46O15213 610 aaKnown RBP5.1□□□□□ -1.59
UBR4-215ENST00000492606 HTATSF1O43719 755 aaKnown RBP5.1□□□□□ -1.59
UBR4-215ENST00000492606 CTNND1O60716 968 aaKnown RBP5.1□□□□□ -1.59
UBR4-215ENST00000492606 IQCF3P0C7M6 154 aa5.1□□□□□ -1.59
UBR4-215ENST00000492606 EDN3P14138 238 aa5.1□□□□□ -1.59
UBR4-215ENST00000492606 AKR1A1P14550 325 aa5.1□□□□□ -1.59
UBR4-215ENST00000492606 ITPKAP23677 461 aa5.1□□□□□ -1.59
UBR4-215ENST00000492606 ELAVL4P26378 380 aaKnown RBP5.1□□□□□ -1.59
UBR4-215ENST00000492606 RFC2P35250 354 aa5.1□□□□□ -1.59
UBR4-215ENST00000492606 HTRA4P83105 476 aaPredicted RBP5.1□□□□□ -1.59
UBR4-215ENST00000492606 SPRED3Q2MJR0 410 aa5.1□□□□□ -1.59
UBR4-215ENST00000492606 AASDHQ4L235 1098 aaPredicted RBP5.1□□□□□ -1.59
UBR4-215ENST00000492606 TSSK4Q6SA08 328 aa5.1□□□□□ -1.59
UBR4-215ENST00000492606 FBXO11Q86XK2 927 aa5.1□□□□□ -1.59
UBR4-215ENST00000492606 NXPE3Q969Y0 559 aa5.1□□□□□ -1.59
UBR4-215ENST00000492606 KIFC2Q96AC6 838 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms