RNA–Protein interactions for RNA: ENST00000491421.5

LSM2-213, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 820 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-213ENST00000491421 ADGRA3Q8IWK6 1321 aa9.34□□□□□ -0.91
LSM2-213ENST00000491421 KDM3AQ9Y4C1 1321 aa9.34□□□□□ -0.91
LSM2-213ENST00000491421 MUC3AQ02505 3323 aa9.34□□□□□ -0.91
LSM2-213ENST00000491421 ZBTB42B2RXF5 422 aa9.34□□□□□ -0.91
LSM2-213ENST00000491421 TNFRSF10AO00220 468 aa9.34□□□□□ -0.91
LSM2-213ENST00000491421 CHMP2AO43633 222 aa9.34□□□□□ -0.91
LSM2-213ENST00000491421 EDIL3O43854 480 aa9.34□□□□□ -0.91
LSM2-213ENST00000491421 GAS7O60861 476 aa9.34□□□□□ -0.91
LSM2-213ENST00000491421 C22orf31O95567 290 aa9.34□□□□□ -0.91
LSM2-213ENST00000491421 CTNNB1P35222 781 aa9.34□□□□□ -0.91
LSM2-213ENST00000491421 KCNQ1P51787 676 aa9.34□□□□□ -0.91
LSM2-213ENST00000491421 ANAPC15P60006 121 aa9.34□□□□□ -0.91
LSM2-213ENST00000491421 SCRN1Q12765 414 aa9.34□□□□□ -0.91
LSM2-213ENST00000491421 TMEM266Q2M3C6 531 aa9.34□□□□□ -0.91
LSM2-213ENST00000491421 LRCH2Q5VUJ6 765 aa9.34□□□□□ -0.91
LSM2-213ENST00000491421 GALNT17Q6IS24 598 aa9.34□□□□□ -0.91
LSM2-213ENST00000491421 KIAA0319LQ8IZA0 1049 aa9.34□□□□□ -0.91
LSM2-213ENST00000491421 BLIDQ8IZY5 108 aa9.34□□□□□ -0.91
LSM2-213ENST00000491421 METTL13Q8N6R0 699 aa9.34□□□□□ -0.91
LSM2-213ENST00000491421 DAGLBQ8NCG7 672 aa9.34□□□□□ -0.91
LSM2-213ENST00000491421 LINC01599Q8WXQ3 324 aa9.34□□□□□ -0.91
LSM2-213ENST00000491421 FAM167AQ96KS9 214 aa9.34□□□□□ -0.91
LSM2-213ENST00000491421 UHRF1Q96T88 793 aaPredicted RBP9.34□□□□□ -0.91
LSM2-213ENST00000491421 TEKT3Q9BXF9 490 aa9.34□□□□□ -0.91
LSM2-213ENST00000491421 DISC1Q9NRI5 854 aa9.34□□□□□ -0.91
LSM2-213ENST00000491421 PADI3Q9ULW8 664 aa9.34□□□□□ -0.91
LSM2-213ENST00000491421 CEP131Q9UPN4 1083 aa9.34□□□□□ -0.91
LSM2-213ENST00000491421 COL4A6Q14031 1691 aa9.34□□□□□ -0.91
LSM2-213ENST00000491421 COL4A4P53420 1690 aaPredicted RBP9.33□□□□□ -0.92
LSM2-213ENST00000491421 H3BNC9 293 aa9.33□□□□□ -0.92
LSM2-213ENST00000491421 M0R2N6 131 aa9.33□□□□□ -0.92
LSM2-213ENST00000491421 PFKFB2O60825 505 aa9.33□□□□□ -0.92
LSM2-213ENST00000491421 RPS6KA5O75582 802 aa9.33□□□□□ -0.92
LSM2-213ENST00000491421 DGKIO75912 1065 aa9.33□□□□□ -0.92
LSM2-213ENST00000491421 TDP2O95551 362 aa9.33□□□□□ -0.92
LSM2-213ENST00000491421 OATP04181 439 aa9.33□□□□□ -0.92
LSM2-213ENST00000491421 STAG3L1P0CL83 205 aa9.33□□□□□ -0.92
LSM2-213ENST00000491421 BMP1P13497 986 aa9.33□□□□□ -0.92
LSM2-213ENST00000491421 XBP1P17861 261 aa9.33□□□□□ -0.92
LSM2-213ENST00000491421 SFNP31947 248 aa9.33□□□□□ -0.92
LSM2-213ENST00000491421 JAK3P52333 1124 aa9.33□□□□□ -0.92
LSM2-213ENST00000491421 PRKCEQ02156 737 aa9.33□□□□□ -0.92
LSM2-213ENST00000491421 NFX1Q12986 1120 aaKnown RBP9.33□□□□□ -0.92
LSM2-213ENST00000491421 GPM6BQ13491 265 aa9.33□□□□□ -0.92
LSM2-213ENST00000491421 BTG3Q14201 252 aaPredicted RBP9.33□□□□□ -0.92
LSM2-213ENST00000491421 NONOQ15233 471 aaKnown RBP eCLIP9.33□□□□□ -0.92
LSM2-213ENST00000491421 ANKRD1Q15327 319 aa9.33□□□□□ -0.92
LSM2-213ENST00000491421 NPY5RQ15761 445 aa9.33□□□□□ -0.92
LSM2-213ENST00000491421 KIZQ2M2Z5 673 aa9.33□□□□□ -0.92
LSM2-213ENST00000491421 Q4G0T1 1027 aa9.33□□□□□ -0.92
LSM2-213ENST00000491421 TIGD5Q53EQ6 642 aa9.33□□□□□ -0.92
LSM2-213ENST00000491421 KRT25Q7Z3Z0 450 aa9.33□□□□□ -0.92
LSM2-213ENST00000491421 RTN4RL1Q86UN2 441 aaPredicted RBP9.33□□□□□ -0.92
LSM2-213ENST00000491421 NPAS4Q8IUM7 802 aa9.33□□□□□ -0.92
LSM2-213ENST00000491421 SLC5A5Q92911 643 aa9.33□□□□□ -0.92
LSM2-213ENST00000491421 GJA10Q969M2 543 aa9.33□□□□□ -0.92
LSM2-213ENST00000491421 MRPL38Q96DV4 380 aaKnown RBP9.33□□□□□ -0.92
LSM2-213ENST00000491421 PPP1R16BQ96T49 567 aa9.33□□□□□ -0.92
LSM2-213ENST00000491421 C11orf84Q9BUA3 381 aaPredicted RBP9.33□□□□□ -0.92
LSM2-213ENST00000491421 UNC45AQ9H3U1 944 aa9.33□□□□□ -0.92
LSM2-213ENST00000491421 RC3H2Q9HBD1 1191 aaKnown RBP9.33□□□□□ -0.92
LSM2-213ENST00000491421 NRBP2Q9NSY0 501 aa9.33□□□□□ -0.92
LSM2-213ENST00000491421 TPCN1Q9ULQ1 816 aa9.33□□□□□ -0.92
LSM2-213ENST00000491421 KCNJ14Q9UNX9 436 aa9.33□□□□□ -0.92
LSM2-213ENST00000491421 RWDD3Q9Y3V2 267 aa9.33□□□□□ -0.92
LSM2-213ENST00000491421 PRRC2BQ5JSZ5 2229 aaKnown RBP9.33□□□□□ -0.92
LSM2-213ENST00000491421 STK36Q9NRP7 1315 aa9.32□□□□□ -0.92
LSM2-213ENST00000491421 MYO9BQ13459 2157 aa9.32□□□□□ -0.92
LSM2-213ENST00000491421 CYP3A7-CYP3A51PA0A087WV96 503 aa9.32□□□□□ -0.92
LSM2-213ENST00000491421 CCDC194A0A1B0GVG4 234 aa9.32□□□□□ -0.92
LSM2-213ENST00000491421 DENND3A2RUS2 1198 aa9.32□□□□□ -0.92
LSM2-213ENST00000491421 C5orf67F2Z3F1 127 aa9.32□□□□□ -0.92
LSM2-213ENST00000491421 GPR182O15218 404 aa9.32□□□□□ -0.92
LSM2-213ENST00000491421 MAGEB2O15479 319 aa9.32□□□□□ -0.92
LSM2-213ENST00000491421 ZNF862O60290 1169 aa9.32□□□□□ -0.92
LSM2-213ENST00000491421 EIF5BO60841 1220 aaKnown RBP9.32□□□□□ -0.92
LSM2-213ENST00000491421 PSMD10O75832 226 aa9.32□□□□□ -0.92
LSM2-213ENST00000491421 VTNP04004 478 aa9.32□□□□□ -0.92
LSM2-213ENST00000491421 ATXN8OSP0DMR3 200 aa9.32□□□□□ -0.92
LSM2-213ENST00000491421 IBSPP21815 317 aaPredicted RBP9.32□□□□□ -0.92
LSM2-213ENST00000491421 CYP3A7P24462 503 aa9.32□□□□□ -0.92
LSM2-213ENST00000491421 TMOD1P28289 359 aa9.32□□□□□ -0.92
LSM2-213ENST00000491421 BMPR1AP36894 532 aa9.32□□□□□ -0.92
LSM2-213ENST00000491421 CLCN3P51790 818 aa9.32□□□□□ -0.92
LSM2-213ENST00000491421 CRYBB1P53674 252 aaPredicted RBP9.32□□□□□ -0.92
LSM2-213ENST00000491421 AK2P54819 239 aa9.32□□□□□ -0.92
LSM2-213ENST00000491421 UGCGQ16739 394 aa9.32□□□□□ -0.92
LSM2-213ENST00000491421 INF2Q27J81 1249 aa9.32□□□□□ -0.92
LSM2-213ENST00000491421 ODR4Q5SWX8 454 aa9.32□□□□□ -0.92
LSM2-213ENST00000491421 MOXD1Q6UVY6 613 aa9.32□□□□□ -0.92
LSM2-213ENST00000491421 FAM43BQ6ZT52 329 aaPredicted RBP9.32□□□□□ -0.92
LSM2-213ENST00000491421 MIER3Q7Z3K6 550 aa9.32□□□□□ -0.92
LSM2-213ENST00000491421 RDM1Q8NG50 284 aa9.32□□□□□ -0.92
LSM2-213ENST00000491421 TMEM40Q8WWA1 233 aa9.32□□□□□ -0.92
LSM2-213ENST00000491421 ZNF689Q96CS4 500 aaPredicted RBP9.32□□□□□ -0.92
LSM2-213ENST00000491421 NECAB3Q96P71 396 aaPredicted RBP9.32□□□□□ -0.92
LSM2-213ENST00000491421 MAP7D2Q96T17 732 aa9.32□□□□□ -0.92
LSM2-213ENST00000491421 OSMRQ99650 979 aa9.32□□□□□ -0.92
LSM2-213ENST00000491421 PHF20Q9BVI0 1012 aa9.32□□□□□ -0.92
LSM2-213ENST00000491421 TMX1Q9H3N1 280 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms