RNA–Protein interactions for RNA: ENST00000491106.1

SNRNP40-207, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 459 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-207ENST00000491106 RTKN2Q8IZC4 609 aa2.58□□□□□ -2
SNRNP40-207ENST00000491106 SLC43A3Q8NBI5 491 aa2.58□□□□□ -2
SNRNP40-207ENST00000491106 PUM2Q8TB72 1066 aaKnown RBP eCLIP2.58□□□□□ -21e-12■□□□□ 8.8
SNRNP40-207ENST00000491106 PTPRN2Q92932 1015 aa2.58□□□□□ -2
SNRNP40-207ENST00000491106 MAGEB10Q96LZ2 347 aaPredicted RBP2.58□□□□□ -2
SNRNP40-207ENST00000491106 SRPK1Q96SB4 655 aaKnown RBP2.58□□□□□ -2
SNRNP40-207ENST00000491106 ADOQ96SZ5 270 aa2.58□□□□□ -2
SNRNP40-207ENST00000491106 KLC2Q9H0B6 622 aa2.58□□□□□ -2
SNRNP40-207ENST00000491106 UCKL1Q9NWZ5 548 aa2.58□□□□□ -2
SNRNP40-207ENST00000491106 PPP4R1LQ9P1A2 415 aa2.58□□□□□ -2
SNRNP40-207ENST00000491106 NDOR1Q9UHB4 597 aa2.58□□□□□ -2
SNRNP40-207ENST00000491106 NR2E1Q9Y466 385 aa2.58□□□□□ -2
SNRNP40-207ENST00000491106 NPFFR2Q9Y5X5 522 aa2.58□□□□□ -2
SNRNP40-207ENST00000491106 USP47Q96K76 1375 aa2.58□□□□□ -2
SNRNP40-207ENST00000491106 URB2Q14146 1524 aaKnown RBP2.58□□□□□ -2
SNRNP40-207ENST00000491106 DNMT1P26358 1616 aaKnown RBP2.57□□□□□ -2
SNRNP40-207ENST00000491106 NESP48681 1621 aa2.57□□□□□ -2
SNRNP40-207ENST00000491106 MUSKO15146 869 aa2.57□□□□□ -2
SNRNP40-207ENST00000491106 KLF4O43474 513 aa2.57□□□□□ -2
SNRNP40-207ENST00000491106 HIP1RO75146 1068 aa2.57□□□□□ -2
SNRNP40-207ENST00000491106 C6P13671 934 aa2.57□□□□□ -2
SNRNP40-207ENST00000491106 PTPN1P18031 435 aaKnown RBP2.57□□□□□ -2
SNRNP40-207ENST00000491106 SUMO1P63165 101 aaKnown RBP2.57□□□□□ -2
SNRNP40-207ENST00000491106 ICAM4Q14773 271 aa2.57□□□□□ -2
SNRNP40-207ENST00000491106 PRKD1Q15139 912 aaPredicted RBP2.57□□□□□ -2
SNRNP40-207ENST00000491106 GPR19Q15760 415 aa2.57□□□□□ -2
SNRNP40-207ENST00000491106 ZMAT1Q5H9K5 638 aa2.57□□□□□ -2
SNRNP40-207ENST00000491106 LCE5AQ5TCM9 118 aa2.57□□□□□ -2
SNRNP40-207ENST00000491106 CD276Q5ZPR3 534 aa2.57□□□□□ -2
SNRNP40-207ENST00000491106 PKN3Q6P5Z2 889 aa2.57□□□□□ -2
SNRNP40-207ENST00000491106 C16orf59Q7L2K0 433 aa2.57□□□□□ -2
SNRNP40-207ENST00000491106 C2orf69Q8N8R5 385 aa2.57□□□□□ -2
SNRNP40-207ENST00000491106 SLC16A11Q8NCK7 471 aa2.57□□□□□ -2
SNRNP40-207ENST00000491106 ZCCHC14Q8WYQ9 949 aaKnown RBP2.57□□□□□ -2
SNRNP40-207ENST00000491106 OSBP2Q969R2 916 aa2.57□□□□□ -2
SNRNP40-207ENST00000491106 PUS7Q96PZ0 661 aaKnown RBP2.57□□□□□ -2
SNRNP40-207ENST00000491106 OR14A2Q96R54 314 aa2.57□□□□□ -2
SNRNP40-207ENST00000491106 TINF2Q9BSI4 451 aa2.57□□□□□ -2
SNRNP40-207ENST00000491106 DHRS4Q9BTZ2 278 aa2.57□□□□□ -2
SNRNP40-207ENST00000491106 VPS11Q9H270 941 aa2.57□□□□□ -2
SNRNP40-207ENST00000491106 ARHGEF4Q9NR80 690 aa2.57□□□□□ -2
SNRNP40-207ENST00000491106 PUF60Q9UHX1 559 aaKnown RBP2.57□□□□□ -2
SNRNP40-207ENST00000491106 TROQ12816 1431 aaPredicted RBP2.57□□□□□ -2
SNRNP40-207ENST00000491106 ANKRD50Q9ULJ7 1429 aa2.57□□□□□ -2
SNRNP40-207ENST00000491106 GPATCH8Q9UKJ3 1502 aaKnown RBP2.57□□□□□ -2
SNRNP40-207ENST00000491106 IQGAP2Q13576 1575 aa2.57□□□□□ -2
SNRNP40-207ENST00000491106 TARBP1Q13395 1621 aaKnown RBP2.57□□□□□ -2
SNRNP40-207ENST00000491106 BCORL1Q5H9F3 1711 aa2.56□□□□□ -2
SNRNP40-207ENST00000491106 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP2.56□□□□□ -2
SNRNP40-207ENST00000491106 CCDC66A2RUB6 948 aa2.56□□□□□ -2
SNRNP40-207ENST00000491106 PRAMEF22A3QJZ6 481 aa2.56□□□□□ -2
SNRNP40-207ENST00000491106 EIF5BO60841 1220 aaKnown RBP2.56□□□□□ -2
SNRNP40-207ENST00000491106 FZD7O75084 574 aa2.56□□□□□ -2
SNRNP40-207ENST00000491106 CRTAMO95727 393 aa2.56□□□□□ -2
SNRNP40-207ENST00000491106 HMGCRP04035 888 aa2.56□□□□□ -2
SNRNP40-207ENST00000491106 FAM153BP0C7A2 387 aa2.56□□□□□ -2
SNRNP40-207ENST00000491106 PTGS1P23219 599 aa2.56□□□□□ -2
SNRNP40-207ENST00000491106 PPP2R1AP30153 589 aa2.56□□□□□ -2
SNRNP40-207ENST00000491106 JAM2P57087 298 aa2.56□□□□□ -2
SNRNP40-207ENST00000491106 GABREP78334 506 aa2.56□□□□□ -2
SNRNP40-207ENST00000491106 DBPQ10586 325 aaPredicted RBP2.56□□□□□ -2
SNRNP40-207ENST00000491106 CNGB1Q14028 1251 aaPredicted RBP2.56□□□□□ -2
SNRNP40-207ENST00000491106 BECN1Q14457 450 aa2.56□□□□□ -2
SNRNP40-207ENST00000491106 WDR43Q15061 677 aaKnown RBP eCLIP2.56□□□□□ -2
SNRNP40-207ENST00000491106 NTRK3Q16288 839 aa2.56□□□□□ -2
SNRNP40-207ENST00000491106 PRR31Q5SQ13 230 aa2.56□□□□□ -2
SNRNP40-207ENST00000491106 CC2D1BQ5T0F9 858 aaKnown RBP2.56□□□□□ -2
SNRNP40-207ENST00000491106 EFCAB2Q5VUJ9 269 aa2.56□□□□□ -2
SNRNP40-207ENST00000491106 STYK1Q6J9G0 422 aa2.56□□□□□ -2
SNRNP40-207ENST00000491106 MAMDC2Q7Z304 686 aaPredicted RBP2.56□□□□□ -2
SNRNP40-207ENST00000491106 FILIP1Q7Z7B0 1213 aa2.56□□□□□ -2
SNRNP40-207ENST00000491106 WDR63Q8IWG1 891 aa2.56□□□□□ -2
SNRNP40-207ENST00000491106 GSPT2Q8IYD1 628 aaKnown RBP2.56□□□□□ -2
SNRNP40-207ENST00000491106 Q8N1Y9 231 aa2.56□□□□□ -2
SNRNP40-207ENST00000491106 CISD2Q8N5K1 135 aaKnown RBP2.56□□□□□ -2
SNRNP40-207ENST00000491106 DTX3Q8N9I9 347 aa2.56□□□□□ -2
SNRNP40-207ENST00000491106 ZBTB38Q8NAP3 1195 aaPredicted RBP2.56□□□□□ -2
SNRNP40-207ENST00000491106 UHMK1Q8TAS1 419 aaKnown RBP2.56□□□□□ -2
SNRNP40-207ENST00000491106 C1orf159Q96HA4 380 aa2.56□□□□□ -2
SNRNP40-207ENST00000491106 TMEM176AQ96HP8 235 aa2.56□□□□□ -2
SNRNP40-207ENST00000491106 TESK2Q96S53 571 aa2.56□□□□□ -2
SNRNP40-207ENST00000491106 RBM15Q96T37 977 aaKnown RBP eCLIP2.56□□□□□ -2
SNRNP40-207ENST00000491106 MRIQ9BWK5 157 aa2.56□□□□□ -2
SNRNP40-207ENST00000491106 EPC1Q9H2F5 836 aa2.56□□□□□ -2
SNRNP40-207ENST00000491106 PNNQ9H307 717 aaKnown RBP2.56□□□□□ -2
SNRNP40-207ENST00000491106 SEMA4AQ9H3S1 761 aa2.56□□□□□ -2
SNRNP40-207ENST00000491106 RWDD1Q9H446 243 aaPredicted RBP2.56□□□□□ -2
SNRNP40-207ENST00000491106 INCENPQ9NQS7 918 aa2.56□□□□□ -2
SNRNP40-207ENST00000491106 SIRPGQ9P1W8 387 aa2.56□□□□□ -2
SNRNP40-207ENST00000491106 ADAM29Q9UKF5 820 aa2.56□□□□□ -2
SNRNP40-207ENST00000491106 ZFR2Q9UPR6 939 aaKnown RBP2.56□□□□□ -2
SNRNP40-207ENST00000491106 PTPN22Q9Y2R2 807 aa2.56□□□□□ -2
SNRNP40-207ENST00000491106 REXO2Q9Y3B8 237 aaKnown RBP2.56□□□□□ -2
SNRNP40-207ENST00000491106 PARD3Q8TEW0 1356 aa2.56□□□□□ -2
SNRNP40-207ENST00000491106 ASXL2Q76L83 1435 aa2.56□□□□□ -2
SNRNP40-207ENST00000491106 ADGRL2O95490 1459 aa2.56□□□□□ -2
SNRNP40-207ENST00000491106 PZPP20742 1482 aa2.56□□□□□ -2
SNRNP40-207ENST00000491106 MAGI3Q5TCQ9 1506 aa2.56□□□□□ -2
SNRNP40-207ENST00000491106 ZMYM4Q5VZL5 1548 aa2.56□□□□□ -2
SNRNP40-207ENST00000491106 KDM6BO15054 1643 aa2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms