RNA–Protein interactions for RNA: ENST00000490653.1

PRPF4B-208, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 2

Gene PRPF4B, Length 581 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-208ENST00000490653 ZBTB10Q96DT7 871 aa8.4□□□□□ -1.06
PRPF4B-208ENST00000490653 ITPKCQ96DU7 683 aa8.4□□□□□ -1.06
PRPF4B-208ENST00000490653 JAKMIP1Q96N16 626 aaKnown RBP8.4□□□□□ -1.06
PRPF4B-208ENST00000490653 GPR20Q99678 358 aa8.4□□□□□ -1.06
PRPF4B-208ENST00000490653 FTOQ9C0B1 505 aaKnown RBP eCLIP8.4□□□□□ -1.06
PRPF4B-208ENST00000490653 SETD4Q9NVD3 440 aa8.4□□□□□ -1.06
PRPF4B-208ENST00000490653 MAP10Q9P2G4 905 aa8.4□□□□□ -1.06
PRPF4B-208ENST00000490653 SEC63Q9UGP8 760 aaKnown RBP8.4□□□□□ -1.06
PRPF4B-208ENST00000490653 NAP1L2Q9ULW6 460 aaPredicted RBP8.4□□□□□ -1.06
PRPF4B-208ENST00000490653 NOD1Q9Y239 953 aa8.4□□□□□ -1.06
PRPF4B-208ENST00000490653 UBIAD1Q9Y5Z9 338 aa8.4□□□□□ -1.06
PRPF4B-208ENST00000490653 SLC4A7Q9Y6M7 1214 aa8.4□□□□□ -1.06
PRPF4B-208ENST00000490653 NCOR1O75376 2440 aa8.39□□□□□ -1.07
PRPF4B-208ENST00000490653 GOLGA8AA7E2F4 631 aa8.39□□□□□ -1.07
PRPF4B-208ENST00000490653 GOLGA8BA8MQT2 603 aa8.39□□□□□ -1.07
PRPF4B-208ENST00000490653 H3BRB1 525 aa8.39□□□□□ -1.07
PRPF4B-208ENST00000490653 STXBP3O00186 592 aa8.39□□□□□ -1.07
PRPF4B-208ENST00000490653 SPTLC1O15269 473 aa8.39□□□□□ -1.07
PRPF4B-208ENST00000490653 FIBPO43427 364 aa8.39□□□□□ -1.07
PRPF4B-208ENST00000490653 EDIL3O43854 480 aa8.39□□□□□ -1.07
PRPF4B-208ENST00000490653 LPXNO60711 386 aa8.39□□□□□ -1.07
PRPF4B-208ENST00000490653 ZMYND10O75800 440 aa8.39□□□□□ -1.07
PRPF4B-208ENST00000490653 SMIM10L2AP0DMW4 78 aa8.39□□□□□ -1.07
PRPF4B-208ENST00000490653 SMIM10L2BP0DMW5 78 aa8.39□□□□□ -1.07
PRPF4B-208ENST00000490653 SELPP16109 830 aa8.39□□□□□ -1.07
PRPF4B-208ENST00000490653 KCNA2P16389 499 aa8.39□□□□□ -1.07
PRPF4B-208ENST00000490653 IGFBP4P22692 258 aa8.39□□□□□ -1.07
PRPF4B-208ENST00000490653 CCT2P78371 535 aaKnown RBP8.39□□□□□ -1.07
PRPF4B-208ENST00000490653 TRAF1Q13077 416 aa8.39□□□□□ -1.07
PRPF4B-208ENST00000490653 ARID5BQ14865 1188 aa8.39□□□□□ -1.07
PRPF4B-208ENST00000490653 PKN1Q16512 942 aa8.39□□□□□ -1.07
PRPF4B-208ENST00000490653 C4orf48Q5BLP8 95 aa8.39□□□□□ -1.07
PRPF4B-208ENST00000490653 KCNV1Q6PIU1 500 aa8.39□□□□□ -1.07
PRPF4B-208ENST00000490653 SYNE3Q6ZMZ3 975 aa8.39□□□□□ -1.07
PRPF4B-208ENST00000490653 BRF1Q92994 677 aa8.39□□□□□ -1.07
PRPF4B-208ENST00000490653 PCYT2Q99447 389 aa8.39□□□□□ -1.07
PRPF4B-208ENST00000490653 TUT1Q9H6E5 874 aaKnown RBP8.39□□□□□ -1.07
PRPF4B-208ENST00000490653 MTCH2Q9Y6C9 303 aa8.39□□□□□ -1.07
PRPF4B-208ENST00000490653 PTPRSQ13332 1948 aa8.39□□□□□ -1.07
PRPF4B-208ENST00000490653 C17orf102A2RUQ5 167 aa8.38□□□□□ -1.07
PRPF4B-208ENST00000490653 LCHNA4D1U4 455 aa8.38□□□□□ -1.07
PRPF4B-208ENST00000490653 SMCO2A6NFE2 343 aa8.38□□□□□ -1.07
PRPF4B-208ENST00000490653 MAN1A2O60476 641 aa8.38□□□□□ -1.07
PRPF4B-208ENST00000490653 ATP2A2P16615 1042 aaKnown RBP8.38□□□□□ -1.07
PRPF4B-208ENST00000490653 POU3F3P20264 500 aaPredicted RBP8.38□□□□□ -1.07
PRPF4B-208ENST00000490653 RPS6KB1P23443 525 aa8.38□□□□□ -1.07
PRPF4B-208ENST00000490653 GRM5P41594 1212 aa8.38□□□□□ -1.07
PRPF4B-208ENST00000490653 NAPAP54920 295 aa8.38□□□□□ -1.07
PRPF4B-208ENST00000490653 ADAM17P78536 824 aa8.38□□□□□ -1.07
PRPF4B-208ENST00000490653 DEFB103AP81534 67 aa8.38□□□□□ -1.07
PRPF4B-208ENST00000490653 PTK7Q13308 1070 aa8.38□□□□□ -1.07
PRPF4B-208ENST00000490653 BFSP2Q13515 415 aa8.38□□□□□ -1.07
PRPF4B-208ENST00000490653 NEDD9Q14511 834 aa8.38□□□□□ -1.07
PRPF4B-208ENST00000490653 JAKMIP3Q5VZ66 844 aa8.38□□□□□ -1.07
PRPF4B-208ENST00000490653 METTL7BQ6UX53 244 aa8.38□□□□□ -1.07
PRPF4B-208ENST00000490653 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.38□□□□□ -1.07
PRPF4B-208ENST00000490653 LRRC8DQ7L1W4 858 aa8.38□□□□□ -1.07
PRPF4B-208ENST00000490653 NLRX1Q86UT6 975 aa8.38□□□□□ -1.07
PRPF4B-208ENST00000490653 PHKBQ93100 1093 aa8.38□□□□□ -1.07
PRPF4B-208ENST00000490653 GAS2L1Q99501 681 aaPredicted RBP8.38□□□□□ -1.07
PRPF4B-208ENST00000490653 LRFN3Q9BTN0 628 aa8.38□□□□□ -1.07
PRPF4B-208ENST00000490653 USP26Q9BXU7 913 aa8.38□□□□□ -1.07
PRPF4B-208ENST00000490653 NCOA5Q9HCD5 579 aaKnown RBP8.38□□□□□ -1.07
PRPF4B-208ENST00000490653 RIC8AQ9NPQ8 531 aa8.38□□□□□ -1.07
PRPF4B-208ENST00000490653 JADE2Q9NQC1 790 aa8.38□□□□□ -1.07
PRPF4B-208ENST00000490653 RBM28Q9NW13 759 aaKnown RBP8.38□□□□□ -1.07
PRPF4B-208ENST00000490653 MSRAQ9UJ68 235 aa8.38□□□□□ -1.07
PRPF4B-208ENST00000490653 NOP56O00567 594 aaKnown RBP8.37□□□□□ -1.07
PRPF4B-208ENST00000490653 CXCL10P02778 98 aa8.37□□□□□ -1.07
PRPF4B-208ENST00000490653 CA3P07451 260 aa8.37□□□□□ -1.07
PRPF4B-208ENST00000490653 CTSHP09668 335 aa8.37□□□□□ -1.07
PRPF4B-208ENST00000490653 MARK3P27448 753 aa8.37□□□□□ -1.07
PRPF4B-208ENST00000490653 PDIA3P30101 505 aaKnown RBP8.37□□□□□ -1.07
PRPF4B-208ENST00000490653 HOXC8P31273 242 aa8.37□□□□□ -1.07
PRPF4B-208ENST00000490653 TCF7P36402 384 aaPredicted RBP8.37□□□□□ -1.07
PRPF4B-208ENST00000490653 THPOP40225 353 aa8.37□□□□□ -1.07
PRPF4B-208ENST00000490653 CLK2P49760 499 aaKnown RBP8.37□□□□□ -1.07
PRPF4B-208ENST00000490653 RBL2Q08999 1139 aa8.37□□□□□ -1.07
PRPF4B-208ENST00000490653 TOB2Q14106 344 aaPredicted RBP8.37□□□□□ -1.07
PRPF4B-208ENST00000490653 KRT32Q14532 448 aa8.37□□□□□ -1.07
PRPF4B-208ENST00000490653 NTRK3Q16288 839 aa8.37□□□□□ -1.07
PRPF4B-208ENST00000490653 GNPTABQ3T906 1256 aa8.37□□□□□ -1.07
PRPF4B-208ENST00000490653 C6orf118Q5T5N4 469 aa8.37□□□□□ -1.07
PRPF4B-208ENST00000490653 FAM117BQ6P1L5 589 aa8.37□□□□□ -1.07
PRPF4B-208ENST00000490653 BLOC1S2Q6QNY1 142 aa8.37□□□□□ -1.07
PRPF4B-208ENST00000490653 RUFY4Q6ZNE9 571 aa8.37□□□□□ -1.07
PRPF4B-208ENST00000490653 HERC6Q8IVU3 1022 aa8.37□□□□□ -1.07
PRPF4B-208ENST00000490653 MEIOBQ8N635 442 aa8.37□□□□□ -1.07
PRPF4B-208ENST00000490653 DBF4BQ8NFT6 615 aa8.37□□□□□ -1.07
PRPF4B-208ENST00000490653 CAGE1Q8TC20 777 aa8.37□□□□□ -1.07
PRPF4B-208ENST00000490653 RASGRP4Q8TDF6 673 aa8.37□□□□□ -1.07
PRPF4B-208ENST00000490653 AFAP1L1Q8TED9 768 aa8.37□□□□□ -1.07
PRPF4B-208ENST00000490653 ATP6V0A1Q93050 837 aa8.37□□□□□ -1.07
PRPF4B-208ENST00000490653 SENP7Q9BQF6 1050 aa8.37□□□□□ -1.07
PRPF4B-208ENST00000490653 MXRA8Q9BRK3 442 aa8.37□□□□□ -1.07
PRPF4B-208ENST00000490653 KATNAL1Q9BW62 490 aa8.37□□□□□ -1.07
PRPF4B-208ENST00000490653 ANO3Q9BYT9 981 aa8.37□□□□□ -1.07
PRPF4B-208ENST00000490653 AGXT2Q9BYV1 514 aa8.37□□□□□ -1.07
PRPF4B-208ENST00000490653 BARHL2Q9NY43 387 aa8.37□□□□□ -1.07
PRPF4B-208ENST00000490653 PCDHA11Q9Y5I1 949 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms