RNA–Protein interactions for RNA: ENST00000490638.5

ARHGEF39-205, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

TSL 1 (best)

Gene ARHGEF39, Length 4,498 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-205ENST00000490638 CGNQ9P2M7 1197 aaKnown RBP15.62■□□□□ 0.09
ARHGEF39-205ENST00000490638 GOLGA8SH3BPF8 625 aa15.62■□□□□ 0.09
ARHGEF39-205ENST00000490638 PDHXO00330 501 aa15.62■□□□□ 0.09
ARHGEF39-205ENST00000490638 NR3C1P04150 777 aa15.62■□□□□ 0.09
ARHGEF39-205ENST00000490638 RIT2Q99578 217 aa15.62■□□□□ 0.09
ARHGEF39-205ENST00000490638 CCSER1Q9C0I3 900 aa15.62■□□□□ 0.09
ARHGEF39-205ENST00000490638 TUFT1Q9NNX1 390 aa15.62■□□□□ 0.09
ARHGEF39-205ENST00000490638 RRAGDQ9NQL2 400 aaPredicted RBP15.62■□□□□ 0.09
ARHGEF39-205ENST00000490638 BZW2Q9Y6E2 419 aaKnown RBP15.62■□□□□ 0.09
ARHGEF39-205ENST00000490638 ARMCX2Q7L311 632 aa15.61■□□□□ 0.09
ARHGEF39-205ENST00000490638 TRIM50Q86XT4 487 aa15.61■□□□□ 0.09
ARHGEF39-205ENST00000490638 MRIQ9BWK5 157 aa15.61■□□□□ 0.09
ARHGEF39-205ENST00000490638 SUCLA2Q9P2R7 463 aaPredicted RBP15.61■□□□□ 0.09
ARHGEF39-205ENST00000490638 TRPA1O75762 1119 aa15.61■□□□□ 0.09
ARHGEF39-205ENST00000490638 FDPSP14324 419 aaKnown RBP15.61■□□□□ 0.09
ARHGEF39-205ENST00000490638 MAPK4P31152 587 aa15.61■□□□□ 0.09
ARHGEF39-205ENST00000490638 KRT81Q14533 505 aa15.61■□□□□ 0.09
ARHGEF39-205ENST00000490638 ZNF394Q53GI3 561 aa15.61■□□□□ 0.09
ARHGEF39-205ENST00000490638 NBPF11Q86T75 865 aa15.61■□□□□ 0.09
ARHGEF39-205ENST00000490638 TMEM143Q96AN5 459 aa15.61■□□□□ 0.09
ARHGEF39-205ENST00000490638 SPATC1LQ9H0A9 340 aa15.61■□□□□ 0.09
ARHGEF39-205ENST00000490638 HPS5Q9UPZ3 1129 aa15.61■□□□□ 0.09
ARHGEF39-205ENST00000490638 HIP1RO75146 1068 aa15.61■□□□□ 0.09
ARHGEF39-205ENST00000490638 PPP2R5DQ14738 602 aa15.61■□□□□ 0.09
ARHGEF39-205ENST00000490638 POLIQ9UNA4 740 aa15.61■□□□□ 0.09
ARHGEF39-205ENST00000490638 POLR3GO15318 223 aaPredicted RBP15.6■□□□□ 0.09
ARHGEF39-205ENST00000490638 GCLMP48507 274 aa15.6■□□□□ 0.09
ARHGEF39-205ENST00000490638 TUBB4BP68371 445 aa15.6■□□□□ 0.09
ARHGEF39-205ENST00000490638 KNOP1Q1ED39 458 aaKnown RBP15.6■□□□□ 0.09
ARHGEF39-205ENST00000490638 SHC4Q6S5L8 630 aa15.6■□□□□ 0.09
ARHGEF39-205ENST00000490638 PHLPP1O60346 1717 aa15.6■□□□□ 0.09
ARHGEF39-205ENST00000490638 ACTN4O43707 911 aaKnown RBP15.6■□□□□ 0.09
ARHGEF39-205ENST00000490638 GFPT2O94808 682 aa15.6■□□□□ 0.09
ARHGEF39-205ENST00000490638 EFNA5P52803 228 aa15.6■□□□□ 0.09
ARHGEF39-205ENST00000490638 LAMC2Q13753 1193 aa15.6■□□□□ 0.09
ARHGEF39-205ENST00000490638 PPP1R21Q6ZMI0 780 aa15.6■□□□□ 0.09
ARHGEF39-205ENST00000490638 RNF180Q86T96 592 aa15.6■□□□□ 0.09
ARHGEF39-205ENST00000490638 FMR1NBQ8N0W7 255 aaPredicted RBP15.6■□□□□ 0.09
ARHGEF39-205ENST00000490638 SLITRK6Q9H5Y7 841 aa15.6■□□□□ 0.09
ARHGEF39-205ENST00000490638 ERAP1Q9NZ08 941 aa15.6■□□□□ 0.09
ARHGEF39-205ENST00000490638 MAGEB2O15479 319 aa15.6■□□□□ 0.09
ARHGEF39-205ENST00000490638 SEC23AQ15436 765 aa15.6■□□□□ 0.09
ARHGEF39-205ENST00000490638 C8orf74Q6P047 294 aa15.6■□□□□ 0.09
ARHGEF39-205ENST00000490638 CCDC105Q8IYK2 499 aa15.6■□□□□ 0.09
ARHGEF39-205ENST00000490638 HEXIM2Q96MH2 286 aaKnown RBP15.6■□□□□ 0.09
ARHGEF39-205ENST00000490638 THAP9Q9H5L6 903 aa15.6■□□□□ 0.09
ARHGEF39-205ENST00000490638 PCDHAC2Q9Y5I4 1007 aa15.6■□□□□ 0.09
ARHGEF39-205ENST00000490638 SLIT3O75094 1523 aa15.6■□□□□ 0.09
ARHGEF39-205ENST00000490638 NFAT5O94916 1531 aa15.6■□□□□ 0.09
ARHGEF39-205ENST00000490638 SALL3Q9BXA9 1300 aa15.6■□□□□ 0.09
ARHGEF39-205ENST00000490638 ONECUT3O60422 494 aaPredicted RBP15.6■□□□□ 0.09
ARHGEF39-205ENST00000490638 RHBDL3P58872 404 aa15.6■□□□□ 0.09
ARHGEF39-205ENST00000490638 C17orf53Q8N3J3 647 aaPredicted RBP15.6■□□□□ 0.09
ARHGEF39-205ENST00000490638 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.6■□□□□ 0.09
ARHGEF39-205ENST00000490638 MTIF3Q9H2K0 278 aaKnown RBP15.6■□□□□ 0.09
ARHGEF39-205ENST00000490638 FAM198AQ9UFP1 575 aa15.6■□□□□ 0.09
ARHGEF39-205ENST00000490638 PIN4Q9Y237 131 aaKnown RBP15.6■□□□□ 0.09
ARHGEF39-205ENST00000490638 SMIM23A6NLE4 172 aa15.59■□□□□ 0.09
ARHGEF39-205ENST00000490638 BUB1O43683 1085 aa15.59■□□□□ 0.09
ARHGEF39-205ENST00000490638 CYP2C9P11712 490 aa15.59■□□□□ 0.09
ARHGEF39-205ENST00000490638 PPATQ06203 517 aa15.59■□□□□ 0.09
ARHGEF39-205ENST00000490638 CFAP58Q5T655 872 aa15.59■□□□□ 0.09
ARHGEF39-205ENST00000490638 SMAP1Q8IYB5 467 aaPredicted RBP15.59■□□□□ 0.09
ARHGEF39-205ENST00000490638 PDGFDQ9GZP0 370 aaPredicted RBP15.59■□□□□ 0.09
ARHGEF39-205ENST00000490638 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.59■□□□□ 0.09
ARHGEF39-205ENST00000490638 ADAMTSL3P82987 1691 aa15.59■□□□□ 0.09
ARHGEF39-205ENST00000490638 PDE4DIPQ5VU43 2346 aa15.59■□□□□ 0.09
ARHGEF39-205ENST00000490638 PRCPP42785 496 aa15.59■□□□□ 0.09
ARHGEF39-205ENST00000490638 KLHL7Q8IXQ5 586 aa15.59■□□□□ 0.09
ARHGEF39-205ENST00000490638 TRPM4Q8TD43 1214 aa15.59■□□□□ 0.09
ARHGEF39-205ENST00000490638 SAAL1Q96ER3 474 aa15.59■□□□□ 0.09
ARHGEF39-205ENST00000490638 P2RX7Q99572 595 aaKnown RBP15.59■□□□□ 0.09
ARHGEF39-205ENST00000490638 GAKO14976 1311 aa15.59■□□□□ 0.09
ARHGEF39-205ENST00000490638 NFIBO00712 420 aa15.59■□□□□ 0.09
ARHGEF39-205ENST00000490638 HUS1O60921 280 aa15.59■□□□□ 0.09
ARHGEF39-205ENST00000490638 PRKCEQ02156 737 aa15.59■□□□□ 0.09
ARHGEF39-205ENST00000490638 DGKDQ16760 1214 aa15.59■□□□□ 0.09
ARHGEF39-205ENST00000490638 GAS2L3Q86XJ1 694 aa15.59■□□□□ 0.09
ARHGEF39-205ENST00000490638 BEST2Q8NFU1 509 aa15.59■□□□□ 0.09
ARHGEF39-205ENST00000490638 UPF1Q92900 1129 aaKnown RBP eCLIP15.59■□□□□ 0.09
ARHGEF39-205ENST00000490638 TMEM60Q9H2L4 133 aa15.59■□□□□ 0.09
ARHGEF39-205ENST00000490638 TYW1Q9NV66 732 aaKnown RBP15.59■□□□□ 0.09
ARHGEF39-205ENST00000490638 TRIM49BA6NDI0 452 aa15.58■□□□□ 0.09
ARHGEF39-205ENST00000490638 ATP1A3P13637 1013 aa15.58■□□□□ 0.09
ARHGEF39-205ENST00000490638 TMEM62Q0P6H9 643 aa15.58■□□□□ 0.09
ARHGEF39-205ENST00000490638 VGLL4Q14135 290 aa15.58■□□□□ 0.09
ARHGEF39-205ENST00000490638 GPR161Q8N6U8 529 aaKnown RBP15.58■□□□□ 0.09
ARHGEF39-205ENST00000490638 HAUS2Q9NVX0 235 aa15.58■□□□□ 0.09
ARHGEF39-205ENST00000490638 NPEPPSP55786 919 aa15.58■□□□□ 0.08
ARHGEF39-205ENST00000490638 IER5Q5VY09 327 aa15.58■□□□□ 0.08
ARHGEF39-205ENST00000490638 GUF1Q8N442 669 aaKnown RBP15.58■□□□□ 0.08
ARHGEF39-205ENST00000490638 GMCL1P1Q8NEA9 526 aa15.58■□□□□ 0.08
ARHGEF39-205ENST00000490638 TRIM58Q8NG06 486 aa15.58■□□□□ 0.08
ARHGEF39-205ENST00000490638 LBHD1Q9BQE6 289 aaPredicted RBP15.58■□□□□ 0.08
ARHGEF39-205ENST00000490638 EFCC1Q9HA90 598 aa15.58■□□□□ 0.08
ARHGEF39-205ENST00000490638 RAB20Q9NX57 234 aa15.58■□□□□ 0.08
ARHGEF39-205ENST00000490638 GOLGA6L7A0A1B0GV03 622 aa15.58■□□□□ 0.08
ARHGEF39-205ENST00000490638 TFRCP02786 760 aaKnown RBP15.58■□□□□ 0.08
ARHGEF39-205ENST00000490638 CYP2C8P10632 490 aa15.58■□□□□ 0.08
ARHGEF39-205ENST00000490638 MESDQ14696 234 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms