RNA–Protein interactions for RNA: ENST00000490504.5

PCCB-218, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 3 BASIC

Gene PCCB, Length 1,613 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-218ENST00000490504 HOXC8P31273 242 aa17.54■□□□□ 0.4
PCCB-218ENST00000490504 PRPHP41219 470 aa17.54■□□□□ 0.4
PCCB-218ENST00000490504 RABGGTBP53611 331 aa17.54■□□□□ 0.4
PCCB-218ENST00000490504 ZRSR1Q15695 479 aaKnown RBP17.54■□□□□ 0.4
PCCB-218ENST00000490504 TRAF7Q6Q0C0 670 aa17.54■□□□□ 0.4
PCCB-218ENST00000490504 USP49Q70CQ1 688 aa17.54■□□□□ 0.4
PCCB-218ENST00000490504 KCNH7Q9NS40 1196 aa17.54■□□□□ 0.4
PCCB-218ENST00000490504 YBX2Q9Y2T7 364 aaKnown RBP17.54■□□□□ 0.4
PCCB-218ENST00000490504 GSTTP1A0A1W2PQM5 241 aa17.54■□□□□ 0.4
PCCB-218ENST00000490504 MAFGO15525 162 aa17.54■□□□□ 0.4
PCCB-218ENST00000490504 NBNO60934 754 aa17.54■□□□□ 0.4
PCCB-218ENST00000490504 ARP10275 920 aa17.54■□□□□ 0.4
PCCB-218ENST00000490504 ACTN1P12814 892 aa17.54■□□□□ 0.4
PCCB-218ENST00000490504 TCF7P36402 384 aaPredicted RBP17.54■□□□□ 0.4
PCCB-218ENST00000490504 AP3B2Q13367 1082 aa17.54■□□□□ 0.4
PCCB-218ENST00000490504 IL17AQ16552 155 aa17.54■□□□□ 0.4
PCCB-218ENST00000490504 ZNF618Q5T7W0 954 aa17.54■□□□□ 0.4
PCCB-218ENST00000490504 KANK3Q6NY19 840 aa17.54■□□□□ 0.4
PCCB-218ENST00000490504 DTHD1Q6ZMT9 781 aa17.54■□□□□ 0.4
PCCB-218ENST00000490504 SERINC5Q86VE9 423 aa17.54■□□□□ 0.4
PCCB-218ENST00000490504 ATP6V0A1Q93050 837 aa17.54■□□□□ 0.4
PCCB-218ENST00000490504 EPSTI1Q96J88 318 aa17.54■□□□□ 0.4
PCCB-218ENST00000490504 PYM1Q9BRP8 204 aaKnown RBP17.54■□□□□ 0.4
PCCB-218ENST00000490504 DNAJC25Q9H1X3 360 aa17.54■□□□□ 0.4
PCCB-218ENST00000490504 SETD4Q9NVD3 440 aa17.54■□□□□ 0.4
PCCB-218ENST00000490504 USP25Q9UHP3 1055 aa17.54■□□□□ 0.4
PCCB-218ENST00000490504 MSRAQ9UJ68 235 aa17.54■□□□□ 0.4
PCCB-218ENST00000490504 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.53■□□□□ 0.4
PCCB-218ENST00000490504 TREHO43280 583 aa17.53■□□□□ 0.4
PCCB-218ENST00000490504 ACTN4O43707 911 aaKnown RBP17.53■□□□□ 0.4
PCCB-218ENST00000490504 NEMFO60524 1076 aa17.53■□□□□ 0.4
PCCB-218ENST00000490504 MYOGP15173 224 aa17.53■□□□□ 0.4
PCCB-218ENST00000490504 ATP2A2P16615 1042 aaKnown RBP17.53■□□□□ 0.4
PCCB-218ENST00000490504 SREBF1P36956 1147 aa17.53■□□□□ 0.4
PCCB-218ENST00000490504 RAB30Q15771 203 aa17.53■□□□□ 0.4
PCCB-218ENST00000490504 CEP55Q53EZ4 464 aa17.53■□□□□ 0.4
PCCB-218ENST00000490504 MCTP2Q6DN12 878 aa17.53■□□□□ 0.4
PCCB-218ENST00000490504 SLC17A8Q8NDX2 589 aa17.53■□□□□ 0.4
PCCB-218ENST00000490504 SEPT1Q8WYJ6 367 aa17.53■□□□□ 0.4
PCCB-218ENST00000490504 ERCC4Q92889 916 aaPredicted RBP17.53■□□□□ 0.4
PCCB-218ENST00000490504 CCDC34Q96HJ3 373 aa17.53■□□□□ 0.4
PCCB-218ENST00000490504 PPP1R9BQ96SB3 815 aa17.53■□□□□ 0.4
PCCB-218ENST00000490504 TMEM60Q9H2L4 133 aa17.53■□□□□ 0.4
PCCB-218ENST00000490504 NKX2-4Q9H2Z4 354 aa17.53■□□□□ 0.4
PCCB-218ENST00000490504 SERTAD1Q9UHV2 236 aa17.53■□□□□ 0.4
PCCB-218ENST00000490504 OR52Z1P0C646 297 aa17.52■□□□□ 0.4
PCCB-218ENST00000490504 MBTPS1Q14703 1052 aa17.52■□□□□ 0.4
PCCB-218ENST00000490504 TCTN1Q2MV58 587 aa17.52■□□□□ 0.4
PCCB-218ENST00000490504 CBX8Q9HC52 389 aa17.52■□□□□ 0.4
PCCB-218ENST00000490504 TUBE1Q9UJT0 475 aa17.52■□□□□ 0.4
PCCB-218ENST00000490504 ZNF215Q9UL58 517 aaPredicted RBP17.52■□□□□ 0.4
PCCB-218ENST00000490504 MEIS1O00470 390 aa17.51■□□□□ 0.39
PCCB-218ENST00000490504 CXCL10P02778 98 aa17.51■□□□□ 0.39
PCCB-218ENST00000490504 TXLNAP40222 546 aa17.51■□□□□ 0.39
PCCB-218ENST00000490504 THPOP40225 353 aa17.51■□□□□ 0.39
PCCB-218ENST00000490504 ZNF165P49910 485 aa17.51■□□□□ 0.39
PCCB-218ENST00000490504 ARHGAP4P98171 946 aa17.51■□□□□ 0.39
PCCB-218ENST00000490504 PNOCQ13519 176 aa17.51■□□□□ 0.39
PCCB-218ENST00000490504 PDILTQ8N807 584 aa17.51■□□□□ 0.39
PCCB-218ENST00000490504 PARNO95453 639 aaKnown RBP17.5■□□□□ 0.39
PCCB-218ENST00000490504 NLRP12P59046 1061 aa17.5■□□□□ 0.39
PCCB-218ENST00000490504 ADAM17P78536 824 aa17.5■□□□□ 0.39
PCCB-218ENST00000490504 ITGB3BPQ13352 177 aaPredicted RBP17.5■□□□□ 0.39
PCCB-218ENST00000490504 C11orf57Q6ZUT1 292 aaPredicted RBP17.5■□□□□ 0.39
PCCB-218ENST00000490504 CEP57L1Q8IYX8 460 aa17.5■□□□□ 0.39
PCCB-218ENST00000490504 CRYGNQ8WXF5 182 aa17.5■□□□□ 0.39
PCCB-218ENST00000490504 DHX58Q96C10 678 aa17.5■□□□□ 0.39
PCCB-218ENST00000490504 NAP1L4Q99733 375 aaKnown RBP17.5■□□□□ 0.39
PCCB-218ENST00000490504 NAT10Q9H0A0 1025 aaKnown RBP17.5■□□□□ 0.39
PCCB-218ENST00000490504 AGO4Q9HCK5 861 aaKnown RBP17.5■□□□□ 0.39
PCCB-218ENST00000490504 JPH1Q9HDC5 661 aaPredicted RBP17.5■□□□□ 0.39
PCCB-218ENST00000490504 CHD9Q3L8U1 2897 aa17.5■□□□□ 0.39
PCCB-218ENST00000490504 A0A087X0B3 334 aa17.5■□□□□ 0.39
PCCB-218ENST00000490504 FAM86B1E9PN63 330 aa17.5■□□□□ 0.39
PCCB-218ENST00000490504 FAM86B2P0C5J1 330 aa17.5■□□□□ 0.39
PCCB-218ENST00000490504 SLFN14P0C7P3 912 aa17.5■□□□□ 0.39
PCCB-218ENST00000490504 GNAT1P11488 350 aa17.5■□□□□ 0.39
PCCB-218ENST00000490504 FOSL2P15408 326 aa17.5■□□□□ 0.39
PCCB-218ENST00000490504 MARK3P27448 753 aa17.5■□□□□ 0.39
PCCB-218ENST00000490504 ZNF76P36508 570 aa17.5■□□□□ 0.39
PCCB-218ENST00000490504 POSTNQ15063 836 aa17.5■□□□□ 0.39
PCCB-218ENST00000490504 PPP4R3AQ6IN85 833 aa17.5■□□□□ 0.39
PCCB-218ENST00000490504 LMBR1Q8WVP7 490 aa17.5■□□□□ 0.39
PCCB-218ENST00000490504 PDLIM2Q96JY6 352 aa17.5■□□□□ 0.39
PCCB-218ENST00000490504 AK8Q96MA6 479 aa17.5■□□□□ 0.39
PCCB-218ENST00000490504 PCYT2Q99447 389 aa17.5■□□□□ 0.39
PCCB-218ENST00000490504 SLC9A2Q9UBY0 812 aa17.5■□□□□ 0.39
PCCB-218ENST00000490504 PCDHA11Q9Y5I1 949 aa17.5■□□□□ 0.39
PCCB-218ENST00000490504 RSPH10B2B2RC85 870 aa17.49■□□□□ 0.39
PCCB-218ENST00000490504 BAIAP3O94812 1187 aa17.49■□□□□ 0.39
PCCB-218ENST00000490504 RSPH10BP0C881 870 aa17.49■□□□□ 0.39
PCCB-218ENST00000490504 GCFC2P16383 781 aaKnown RBP17.49■□□□□ 0.39
PCCB-218ENST00000490504 CNKSR3Q6P9H4 555 aa17.49■□□□□ 0.39
PCCB-218ENST00000490504 LUZP1Q86V48 1076 aa17.49■□□□□ 0.39
PCCB-218ENST00000490504 POTEDQ86YR6 584 aa17.49■□□□□ 0.39
PCCB-218ENST00000490504 IQUBQ8NA54 791 aa17.49■□□□□ 0.39
PCCB-218ENST00000490504 PHOSPHO2Q8TCD6 241 aa17.49■□□□□ 0.39
PCCB-218ENST00000490504 GLG1Q92896 1179 aa17.49■□□□□ 0.39
PCCB-218ENST00000490504 SLC28A3Q9HAS3 691 aa17.49■□□□□ 0.39
PCCB-218ENST00000490504 SCN5AQ14524 2016 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms