RNA–Protein interactions for RNA: ENST00000490354.5

RBM39-235, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 436 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-235ENST00000490354 CHPF2Q9P2E5 772 aa5.66□□□□□ -1.5
RBM39-235ENST00000490354 GULP1Q9UBP9 304 aa5.66□□□□□ -1.5
RBM39-235ENST00000490354 NUDT5Q9UKK9 219 aa5.66□□□□□ -1.5
RBM39-235ENST00000490354 ASAP1Q9ULH1 1129 aa5.66□□□□□ -1.5
RBM39-235ENST00000490354 DDX19BQ9UMR2 479 aa5.66□□□□□ -1.5
RBM39-235ENST00000490354 PPT2Q9UMR5 302 aa5.66□□□□□ -1.5
RBM39-235ENST00000490354 TNNQ9UQP3 1299 aa5.66□□□□□ -1.5
RBM39-235ENST00000490354 USP16Q9Y5T5 823 aa5.66□□□□□ -1.5
RBM39-235ENST00000490354 ABCC4O15439 1325 aa5.66□□□□□ -1.5
RBM39-235ENST00000490354 LTBP3Q9NS15 1303 aa5.66□□□□□ -1.5
RBM39-235ENST00000490354 BCL9O00512 1426 aa5.65□□□□□ -1.5
RBM39-235ENST00000490354 STARD3NLO95772 234 aa5.65□□□□□ -1.5
RBM39-235ENST00000490354 CCT4P50991 539 aaKnown RBP5.65□□□□□ -1.5
RBM39-235ENST00000490354 RBM6P78332 1123 aaKnown RBP5.65□□□□□ -1.5
RBM39-235ENST00000490354 SLC9A5Q14940 896 aa5.65□□□□□ -1.5
RBM39-235ENST00000490354 DPY19L1Q2PZI1 675 aa5.65□□□□□ -1.5
RBM39-235ENST00000490354 LDLRAD1Q5T700 205 aa5.65□□□□□ -1.5
RBM39-235ENST00000490354 CPZQ66K79 652 aa5.65□□□□□ -1.5
RBM39-235ENST00000490354 CPNE8Q86YQ8 564 aa5.65□□□□□ -1.5
RBM39-235ENST00000490354 ITPRIPQ8IWB1 547 aa5.65□□□□□ -1.5
RBM39-235ENST00000490354 TMEM87AQ8NBN3 555 aa5.65□□□□□ -1.5
RBM39-235ENST00000490354 RBBP8NLQ8NC74 664 aaPredicted RBP5.65□□□□□ -1.5
RBM39-235ENST00000490354 C8orf49Q96NF6 230 aa5.65□□□□□ -1.5
RBM39-235ENST00000490354 SYT3Q9BQG1 590 aa5.65□□□□□ -1.5
RBM39-235ENST00000490354 MTA3Q9BTC8 594 aa5.65□□□□□ -1.5
RBM39-235ENST00000490354 ZBTB40Q9NUA8 1239 aa5.65□□□□□ -1.5
RBM39-235ENST00000490354 WHRNQ9P202 907 aa5.65□□□□□ -1.5
RBM39-235ENST00000490354 KCNQ2O43526 872 aa5.64□□□□□ -1.51
RBM39-235ENST00000490354 SMARCA5O60264 1052 aaPredicted RBP5.64□□□□□ -1.51
RBM39-235ENST00000490354 ZBTB7AO95365 584 aa5.64□□□□□ -1.51
RBM39-235ENST00000490354 DDX58O95786 925 aaKnown RBP5.64□□□□□ -1.51
RBM39-235ENST00000490354 PROSER3Q2NL68 480 aa5.64□□□□□ -1.51
RBM39-235ENST00000490354 TBC1D10BQ4KMP7 808 aaPredicted RBP5.64□□□□□ -1.51
RBM39-235ENST00000490354 KSR2Q6VAB6 950 aa5.64□□□□□ -1.51
RBM39-235ENST00000490354 LRP10Q7Z4F1 713 aa5.64□□□□□ -1.51
RBM39-235ENST00000490354 LINC00482Q8N8I6 264 aa5.64□□□□□ -1.51
RBM39-235ENST00000490354 RNF34Q969K3 372 aa5.64□□□□□ -1.51
RBM39-235ENST00000490354 LOXL4Q96JB6 756 aa5.64□□□□□ -1.51
RBM39-235ENST00000490354 CCDC136Q96JN2 1154 aa5.64□□□□□ -1.51
RBM39-235ENST00000490354 HAUS7Q99871 368 aa5.64□□□□□ -1.51
RBM39-235ENST00000490354 PHAXQ9H814 394 aaKnown RBP5.64□□□□□ -1.51
RBM39-235ENST00000490354 SIT1Q9Y3P8 196 aa5.64□□□□□ -1.51
RBM39-235ENST00000490354 ABCA3Q99758 1704 aa5.64□□□□□ -1.51
RBM39-235ENST00000490354 PI4KAP2A4QPH2 592 aa5.63□□□□□ -1.51
RBM39-235ENST00000490354 PLATP00750 562 aa5.63□□□□□ -1.51
RBM39-235ENST00000490354 ANXA1P04083 346 aa5.63□□□□□ -1.51
RBM39-235ENST00000490354 A1BGP04217 495 aa5.63□□□□□ -1.51
RBM39-235ENST00000490354 C8BP07358 591 aa5.63□□□□□ -1.51
RBM39-235ENST00000490354 PDIA4P13667 645 aaKnown RBP5.63□□□□□ -1.51
RBM39-235ENST00000490354 ZNF20P17024 532 aa5.63□□□□□ -1.51
RBM39-235ENST00000490354 SEPHS1P49903 392 aa5.63□□□□□ -1.51
RBM39-235ENST00000490354 WWC2Q6AWC2 1192 aa5.63□□□□□ -1.51
RBM39-235ENST00000490354 COPS6Q7L5N1 327 aa5.63□□□□□ -1.51
RBM39-235ENST00000490354 KRT27Q7Z3Y8 459 aa5.63□□□□□ -1.51
RBM39-235ENST00000490354 DNAJC10Q8IXB1 793 aa5.63□□□□□ -1.51
RBM39-235ENST00000490354 PI4KAP1Q8N8J0 262 aa5.63□□□□□ -1.51
RBM39-235ENST00000490354 USP33Q8TEY7 942 aa5.63□□□□□ -1.51
RBM39-235ENST00000490354 DNAAF4Q8WXU2 420 aa5.63□□□□□ -1.51
RBM39-235ENST00000490354 SAMD11Q96NU1 681 aa5.63□□□□□ -1.51
RBM39-235ENST00000490354 GORASP1Q9BQQ3 440 aa5.63□□□□□ -1.51
RBM39-235ENST00000490354 C1QTNF3Q9BXJ4 246 aa5.63□□□□□ -1.51
RBM39-235ENST00000490354 BACE2Q9Y5Z0 518 aa5.63□□□□□ -1.51
RBM39-235ENST00000490354 RGS12O14924 1447 aa5.63□□□□□ -1.51
RBM39-235ENST00000490354 LRRC37A3O60309 1634 aa5.63□□□□□ -1.51
RBM39-235ENST00000490354 ADAMTS7Q9UKP4 1686 aa5.63□□□□□ -1.51
RBM39-235ENST00000490354 C2orf71A6NGG8 1288 aa5.62□□□□□ -1.51
RBM39-235ENST00000490354 C1QTNF3-AMACRE9PGA6 284 aa5.62□□□□□ -1.51
RBM39-235ENST00000490354 CYP2C8P10632 490 aa5.62□□□□□ -1.51
RBM39-235ENST00000490354 CYP19A1P11511 503 aaPredicted RBP5.62□□□□□ -1.51
RBM39-235ENST00000490354 HDAC1Q13547 482 aaPredicted RBP5.62□□□□□ -1.51
RBM39-235ENST00000490354 GNPTABQ3T906 1256 aa5.62□□□□□ -1.51
RBM39-235ENST00000490354 ZNF394Q53GI3 561 aa5.62□□□□□ -1.51
RBM39-235ENST00000490354 BEND3Q5T5X7 828 aa5.62□□□□□ -1.51
RBM39-235ENST00000490354 SLC4A10Q6U841 1118 aa5.62□□□□□ -1.51
RBM39-235ENST00000490354 TTC9BQ8N6N2 239 aa5.62□□□□□ -1.51
RBM39-235ENST00000490354 SLC16A11Q8NCK7 471 aa5.62□□□□□ -1.51
RBM39-235ENST00000490354 FGD4Q96M96 766 aa5.62□□□□□ -1.51
RBM39-235ENST00000490354 KLHL25Q9H0H3 589 aa5.62□□□□□ -1.51
RBM39-235ENST00000490354 RWDD1Q9H446 243 aaPredicted RBP5.62□□□□□ -1.51
RBM39-235ENST00000490354 RGS17Q9UGC6 210 aaPredicted RBP5.62□□□□□ -1.51
RBM39-235ENST00000490354 PCDHGB7Q9Y5F8 929 aa5.62□□□□□ -1.51
RBM39-235ENST00000490354 IBTKQ9P2D0 1353 aaPredicted RBP5.62□□□□□ -1.51
RBM39-235ENST00000490354 C7orf72A4D263 438 aa5.61□□□□□ -1.51
RBM39-235ENST00000490354 ALDH1L1O75891 902 aa5.61□□□□□ -1.51
RBM39-235ENST00000490354 FSHBP01225 129 aa5.61□□□□□ -1.51
RBM39-235ENST00000490354 NTRK1P04629 796 aa5.61□□□□□ -1.51
RBM39-235ENST00000490354 GNAI3P08754 354 aa5.61□□□□□ -1.51
RBM39-235ENST00000490354 MYL6BP14649 208 aa5.61□□□□□ -1.51
RBM39-235ENST00000490354 PAMP19021 973 aa5.61□□□□□ -1.51
RBM39-235ENST00000490354 HMGB2P26583 209 aaKnown RBP5.61□□□□□ -1.51
RBM39-235ENST00000490354 THBS2P35442 1172 aa5.61□□□□□ -1.51
RBM39-235ENST00000490354 IL6STP40189 918 aaPredicted RBP5.61□□□□□ -1.51
RBM39-235ENST00000490354 HEATR6Q6AI08 1181 aaKnown RBP5.61□□□□□ -1.51
RBM39-235ENST00000490354 CCDC81Q6ZN84 652 aa5.61□□□□□ -1.51
RBM39-235ENST00000490354 CENPQQ7L2Z9 268 aaPredicted RBP5.61□□□□□ -1.51
RBM39-235ENST00000490354 RPAP2Q8IXW5 612 aaPredicted RBP5.61□□□□□ -1.51
RBM39-235ENST00000490354 LINS1Q8NG48 757 aa5.61□□□□□ -1.51
RBM39-235ENST00000490354 KDM2BQ8NHM5 1336 aa5.61□□□□□ -1.51
RBM39-235ENST00000490354 PLBD2Q8NHP8 589 aa5.61□□□□□ -1.51
RBM39-235ENST00000490354 PALLDQ8WX93 1383 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms