RNA–Protein interactions for RNA: ENST00000489617.5

CDK18-211, Transcript of cyclin dependent kinase 18, humanhuman

TSL 1 (best)

Gene CDK18, Length 3,190 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK18-211ENST00000489617 SAFBQ15424 915 aaKnown RBP eCLIP12.6□□□□□ -0.39
CDK18-211ENST00000489617 P3H1Q32P28 736 aa12.6□□□□□ -0.39
CDK18-211ENST00000489617 CEP128Q6ZU80 1094 aa12.6□□□□□ -0.39
CDK18-211ENST00000489617 HVCN1Q96D96 273 aa12.6□□□□□ -0.39
CDK18-211ENST00000489617 POLR3CQ9BUI4 534 aaPredicted RBP12.6□□□□□ -0.39
CDK18-211ENST00000489617 SLC26A6Q9BXS9 759 aa12.6□□□□□ -0.39
CDK18-211ENST00000489617 GPBP1L1Q9HC44 474 aaPredicted RBP12.6□□□□□ -0.39
CDK18-211ENST00000489617 SAMSN1Q9NSI8 373 aaKnown RBP12.6□□□□□ -0.39
CDK18-211ENST00000489617 ARAP2Q8WZ64 1704 aa12.59□□□□□ -0.39
CDK18-211ENST00000489617 SOWAHDA6NJG2 315 aa12.59□□□□□ -0.39
CDK18-211ENST00000489617 PEX10O60683 326 aa12.59□□□□□ -0.39
CDK18-211ENST00000489617 SMARCA1P28370 1054 aa12.59□□□□□ -0.39
CDK18-211ENST00000489617 CDK8P49336 464 aa12.59□□□□□ -0.39
CDK18-211ENST00000489617 PPFIBP1Q86W92 1011 aa12.59□□□□□ -0.39
CDK18-211ENST00000489617 NAF1Q96HR8 494 aaKnown RBP12.59□□□□□ -0.39
CDK18-211ENST00000489617 FGD4Q96M96 766 aa12.59□□□□□ -0.39
CDK18-211ENST00000489617 PCDH18Q9HCL0 1135 aa12.59□□□□□ -0.39
CDK18-211ENST00000489617 SERTAD1Q9UHV2 236 aa12.59□□□□□ -0.39
CDK18-211ENST00000489617 SPDYE2Q495Y8 402 aa12.59□□□□□ -0.39
CDK18-211ENST00000489617 C12orf60Q5U649 245 aa12.59□□□□□ -0.39
CDK18-211ENST00000489617 ANO7Q6IWH7 933 aa12.59□□□□□ -0.39
CDK18-211ENST00000489617 NOSTRINQ8IVI9 506 aa12.59□□□□□ -0.39
CDK18-211ENST00000489617 SULF1Q8IWU6 871 aa12.59□□□□□ -0.39
CDK18-211ENST00000489617 CCHCR1Q8TD31 782 aa12.59□□□□□ -0.39
CDK18-211ENST00000489617 CPLX3Q8WVH0 158 aa12.59□□□□□ -0.39
CDK18-211ENST00000489617 RRP36Q96EU6 259 aaKnown RBP12.59□□□□□ -0.39
CDK18-211ENST00000489617 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.59□□□□□ -0.39
CDK18-211ENST00000489617 GGA2Q9UJY4 613 aa12.59□□□□□ -0.39
CDK18-211ENST00000489617 TMCC1O94876 653 aa12.59□□□□□ -0.39
CDK18-211ENST00000489617 GH2P01242 217 aa12.59□□□□□ -0.39
CDK18-211ENST00000489617 HOXD12P35452 270 aa12.59□□□□□ -0.39
CDK18-211ENST00000489617 FLT3P36888 993 aa12.59□□□□□ -0.39
CDK18-211ENST00000489617 USP14P54578 494 aa12.59□□□□□ -0.39
CDK18-211ENST00000489617 SNAP25P60880 206 aa12.59□□□□□ -0.39
CDK18-211ENST00000489617 SSRP1Q08945 709 aaKnown RBP12.59□□□□□ -0.39
CDK18-211ENST00000489617 TMEM67Q5HYA8 995 aa12.59□□□□□ -0.39
CDK18-211ENST00000489617 TBC1D1Q86TI0 1168 aaPredicted RBP12.59□□□□□ -0.39
CDK18-211ENST00000489617 GRAMD1CQ8IYS0 662 aa12.59□□□□□ -0.39
CDK18-211ENST00000489617 SAMD3Q8N6K7 520 aa12.59□□□□□ -0.39
CDK18-211ENST00000489617 DCPSQ96C86 337 aaKnown RBP12.59□□□□□ -0.39
CDK18-211ENST00000489617 NUP88Q99567 741 aaPredicted RBP12.59□□□□□ -0.39
CDK18-211ENST00000489617 SERPINB13Q9UIV8 391 aa12.59□□□□□ -0.39
CDK18-211ENST00000489617 SBF1O95248 1867 aa12.58□□□□□ -0.4
CDK18-211ENST00000489617 CNTNAP1P78357 1384 aa12.58□□□□□ -0.4
CDK18-211ENST00000489617 TRIM43BA6NCK2 446 aa12.58□□□□□ -0.4
CDK18-211ENST00000489617 BTBD18B2RXH4 712 aa12.58□□□□□ -0.4
CDK18-211ENST00000489617 IFIT3O14879 490 aaKnown RBP12.58□□□□□ -0.4
CDK18-211ENST00000489617 HNRNPCP07910 306 aaKnown RBP eCLIP12.58□□□□□ -0.4
CDK18-211ENST00000489617 TSPY3P0CV98 308 aa12.58□□□□□ -0.4
CDK18-211ENST00000489617 TSPY8P0CW00 308 aa12.58□□□□□ -0.4
CDK18-211ENST00000489617 OXCT1P55809 520 aa12.58□□□□□ -0.4
CDK18-211ENST00000489617 MKRN4PQ13434 485 aaPredicted RBP12.58□□□□□ -0.4
CDK18-211ENST00000489617 NR1I3Q14994 352 aa12.58□□□□□ -0.4
CDK18-211ENST00000489617 SLC35F6Q8N357 371 aa12.58□□□□□ -0.4
CDK18-211ENST00000489617 EHBP1Q8NDI1 1231 aa12.58□□□□□ -0.4
CDK18-211ENST00000489617 DDX27Q96GQ7 796 aaKnown RBP12.58□□□□□ -0.4
CDK18-211ENST00000489617 CLMNQ96JQ2 1002 aa12.58□□□□□ -0.4
CDK18-211ENST00000489617 TMEM87BQ96K49 555 aa12.58□□□□□ -0.4
CDK18-211ENST00000489617 IWS1Q96ST2 819 aa12.58□□□□□ -0.4
CDK18-211ENST00000489617 YY1P25490 414 aa12.58□□□□□ -0.4
CDK18-211ENST00000489617 RFC5P40937 340 aa12.58□□□□□ -0.4
CDK18-211ENST00000489617 ECE1P42892 770 aa12.58□□□□□ -0.4
CDK18-211ENST00000489617 GRIN1Q05586 938 aa12.58□□□□□ -0.4
CDK18-211ENST00000489617 MORC3Q14149 939 aa12.58□□□□□ -0.4
CDK18-211ENST00000489617 SEPT2Q15019 361 aa12.58□□□□□ -0.4
CDK18-211ENST00000489617 KANK3Q6NY19 840 aa12.58□□□□□ -0.4
CDK18-211ENST00000489617 SND1Q7KZF4 910 aaKnown RBP eCLIP12.58□□□□□ -0.4
CDK18-211ENST00000489617 MAATS1Q7Z4T9 603 aa12.58□□□□□ -0.4
CDK18-211ENST00000489617 TEX9Q8N6V9 391 aa12.58□□□□□ -0.4
CDK18-211ENST00000489617 KIFAP3Q92845 792 aa12.58□□□□□ -0.4
CDK18-211ENST00000489617 PANX2Q96RD6 677 aa12.58□□□□□ -0.4
CDK18-211ENST00000489617 RPS6KC1Q96S38 1066 aa12.58□□□□□ -0.4
CDK18-211ENST00000489617 SRPK1Q96SB4 655 aaKnown RBP12.58□□□□□ -0.4
CDK18-211ENST00000489617 ADARB2Q9NS39 739 aaKnown RBP12.58□□□□□ -0.4
CDK18-211ENST00000489617 FBXO9Q9UK97 447 aaPredicted RBP12.58□□□□□ -0.4
CDK18-211ENST00000489617 SLC12A7Q9Y666 1083 aa12.58□□□□□ -0.4
CDK18-211ENST00000489617 HNRNPRO43390 633 aaKnown RBP12.57□□□□□ -0.4
CDK18-211ENST00000489617 DNAJC8O75937 253 aaPredicted RBP12.57□□□□□ -0.4
CDK18-211ENST00000489617 HARSP12081 509 aaKnown RBP12.57□□□□□ -0.4
CDK18-211ENST00000489617 ZFXP17010 805 aaPredicted RBP12.57□□□□□ -0.4
CDK18-211ENST00000489617 PPP4CP60510 307 aa12.57□□□□□ -0.4
CDK18-211ENST00000489617 NSUN2Q08J23 767 aaKnown RBP eCLIP12.57□□□□□ -0.4
CDK18-211ENST00000489617 DMPKQ09013 629 aa12.57□□□□□ -0.4
CDK18-211ENST00000489617 NTRK3Q16288 839 aa12.57□□□□□ -0.4
CDK18-211ENST00000489617 TSR1Q2NL82 804 aaKnown RBP12.57□□□□□ -0.4
CDK18-211ENST00000489617 FKBP15Q5T1M5 1219 aa12.57□□□□□ -0.4
CDK18-211ENST00000489617 TMEM154Q6P9G4 183 aa12.57□□□□□ -0.4
CDK18-211ENST00000489617 EXOC3L1Q86VI1 746 aa12.57□□□□□ -0.4
CDK18-211ENST00000489617 ZNF444Q8N0Y2 327 aaPredicted RBP12.57□□□□□ -0.4
CDK18-211ENST00000489617 TMCO5AQ8N6Q1 288 aa12.57□□□□□ -0.4
CDK18-211ENST00000489617 GBP7Q8N8V2 638 aaPredicted RBP12.57□□□□□ -0.4
CDK18-211ENST00000489617 NR1H4Q96RI1 486 aaPredicted RBP12.57□□□□□ -0.4
CDK18-211ENST00000489617 MOV10L1Q9BXT6 1211 aaKnown RBP12.57□□□□□ -0.4
CDK18-211ENST00000489617 TRPV5Q9NQA5 729 aa12.57□□□□□ -0.4
CDK18-211ENST00000489617 ATP8A2Q9NTI2 1148 aa12.57□□□□□ -0.4
CDK18-211ENST00000489617 ADGRG1Q9Y653 693 aa12.57□□□□□ -0.4
CDK18-211ENST00000489617 MYO3BQ8WXR4 1341 aa12.57□□□□□ -0.4
CDK18-211ENST00000489617 TESPA1A2RU30 521 aaPredicted RBP12.57□□□□□ -0.4
CDK18-211ENST00000489617 BACH1O14867 736 aa12.57□□□□□ -0.4
CDK18-211ENST00000489617 PTPREP23469 700 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms