RNA–Protein interactions for RNA: ENST00000489500.1

TNRC6B-208, Transcript of trinucleotide repeat containing 6B, humanhuman

TSL 2

Gene TNRC6B, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6B-208ENST00000489500 DNERQ8NFT8 737 aa10.3□□□□□ -0.76
TNRC6B-208ENST00000489500 RNPC3Q96LT9 517 aaKnown RBP10.3□□□□□ -0.76
TNRC6B-208ENST00000489500 PRIMPOLQ96LW4 560 aa10.3□□□□□ -0.76
TNRC6B-208ENST00000489500 STXBP5LQ9Y2K9 1186 aa10.3□□□□□ -0.76
TNRC6B-208ENST00000489500 SUPT16HQ9Y5B9 1047 aaKnown RBP10.3□□□□□ -0.76
TNRC6B-208ENST00000489500 TRIM43BA6NCK2 446 aa10.29□□□□□ -0.76
TNRC6B-208ENST00000489500 DYNC1LI2O43237 492 aaPredicted RBP10.29□□□□□ -0.76
TNRC6B-208ENST00000489500 KPNA6O60684 536 aa10.29□□□□□ -0.76
TNRC6B-208ENST00000489500 TIMP1P01033 207 aa10.29□□□□□ -0.76
TNRC6B-208ENST00000489500 CALML3P27482 149 aa10.29□□□□□ -0.76
TNRC6B-208ENST00000489500 CPT1AP50416 773 aa10.29□□□□□ -0.76
TNRC6B-208ENST00000489500 ALDH5A1P51649 535 aaPredicted RBP10.29□□□□□ -0.76
TNRC6B-208ENST00000489500 SNAP25P60880 206 aa10.29□□□□□ -0.76
TNRC6B-208ENST00000489500 NKX3-2P78367 333 aa10.29□□□□□ -0.76
TNRC6B-208ENST00000489500 SMAD3P84022 425 aaKnown RBP10.29□□□□□ -0.76
TNRC6B-208ENST00000489500 FAAP100Q0VG06 881 aa10.29□□□□□ -0.76
TNRC6B-208ENST00000489500 SART3Q15020 963 aaKnown RBP10.29□□□□□ -0.76
TNRC6B-208ENST00000489500 SHHQ15465 462 aa10.29□□□□□ -0.76
TNRC6B-208ENST00000489500 FSCN1Q16658 493 aaKnown RBP10.29□□□□□ -0.76
TNRC6B-208ENST00000489500 MUM1L1Q5H9M0 696 aa10.29□□□□□ -0.76
TNRC6B-208ENST00000489500 IFIT1BQ5T764 474 aaKnown RBP10.29□□□□□ -0.76
TNRC6B-208ENST00000489500 TTBK2Q6IQ55 1244 aa10.29□□□□□ -0.76
TNRC6B-208ENST00000489500 DHX32Q7L7V1 743 aaKnown RBP10.29□□□□□ -0.76
TNRC6B-208ENST00000489500 TRIM43Q96BQ3 446 aaPredicted RBP10.29□□□□□ -0.76
TNRC6B-208ENST00000489500 LENG1Q96BZ8 264 aaPredicted RBP10.29□□□□□ -0.76
TNRC6B-208ENST00000489500 TMEM265A0A087WTH1 108 aa10.28□□□□□ -0.76
TNRC6B-208ENST00000489500 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.28□□□□□ -0.76
TNRC6B-208ENST00000489500 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.28□□□□□ -0.76
TNRC6B-208ENST00000489500 C9orf172C9J069 976 aa10.28□□□□□ -0.76
TNRC6B-208ENST00000489500 PARP1P09874 1014 aaKnown RBP10.28□□□□□ -0.76
TNRC6B-208ENST00000489500 SUPT20HL2P0C7V6 817 aa10.28□□□□□ -0.76
TNRC6B-208ENST00000489500 SNHG28P0DPA3 235 aa10.28□□□□□ -0.76
TNRC6B-208ENST00000489500 RAC1P63000 192 aa10.28□□□□□ -0.76
TNRC6B-208ENST00000489500 ADGRE1Q14246 886 aa10.28□□□□□ -0.76
TNRC6B-208ENST00000489500 MBTPS1Q14703 1052 aa10.28□□□□□ -0.76
TNRC6B-208ENST00000489500 DUSP28Q4G0W2 176 aa10.28□□□□□ -0.76
TNRC6B-208ENST00000489500 COX20Q5RI15 118 aa10.28□□□□□ -0.76
TNRC6B-208ENST00000489500 PERM1Q5SV97 790 aa10.28□□□□□ -0.76
TNRC6B-208ENST00000489500 CCSAPQ6IQ19 270 aaPredicted RBP10.28□□□□□ -0.76
TNRC6B-208ENST00000489500 MFSD5Q6N075 450 aa10.28□□□□□ -0.76
TNRC6B-208ENST00000489500 EEPD1Q7L9B9 569 aa10.28□□□□□ -0.76
TNRC6B-208ENST00000489500 TBC1D10CQ8IV04 446 aa10.28□□□□□ -0.76
TNRC6B-208ENST00000489500 RGS22Q8NE09 1264 aa10.28□□□□□ -0.76
TNRC6B-208ENST00000489500 MORC4Q8TE76 937 aa10.28□□□□□ -0.76
TNRC6B-208ENST00000489500 FGD4Q96M96 766 aa10.28□□□□□ -0.76
TNRC6B-208ENST00000489500 LPIN3Q9BQK8 851 aa10.28□□□□□ -0.76
TNRC6B-208ENST00000489500 ZKSCAN3Q9BRR0 538 aa10.28□□□□□ -0.76
TNRC6B-208ENST00000489500 WDR11Q9BZH6 1224 aa10.28□□□□□ -0.76
TNRC6B-208ENST00000489500 MTMR10Q9NXD2 777 aa10.28□□□□□ -0.76
TNRC6B-208ENST00000489500 ZMIZ1Q9ULJ6 1067 aa10.28□□□□□ -0.76
TNRC6B-208ENST00000489500 MRPL11Q9Y3B7 192 aaKnown RBP10.28□□□□□ -0.76
TNRC6B-208ENST00000489500 ABCB11O95342 1321 aa10.28□□□□□ -0.76
TNRC6B-208ENST00000489500 B4E1Z4 1266 aa10.27□□□□□ -0.77
TNRC6B-208ENST00000489500 RARAP10276 462 aa10.27□□□□□ -0.77
TNRC6B-208ENST00000489500 CDK7P50613 346 aa10.27□□□□□ -0.77
TNRC6B-208ENST00000489500 BEX3Q00994 111 aa10.27□□□□□ -0.77
TNRC6B-208ENST00000489500 ITGA7Q13683 1181 aa10.27□□□□□ -0.77
TNRC6B-208ENST00000489500 TTLL4Q14679 1199 aa10.27□□□□□ -0.77
TNRC6B-208ENST00000489500 PPP2R5BQ15173 497 aa10.27□□□□□ -0.77
TNRC6B-208ENST00000489500 USH1GQ495M9 461 aa10.27□□□□□ -0.77
TNRC6B-208ENST00000489500 TTC22Q5TAA0 569 aa10.27□□□□□ -0.77
TNRC6B-208ENST00000489500 PSRC1Q6PGN9 363 aaPredicted RBP10.27□□□□□ -0.77
TNRC6B-208ENST00000489500 CXCL17Q6UXB2 119 aa10.27□□□□□ -0.77
TNRC6B-208ENST00000489500 RALYLQ86SE5 291 aaKnown RBP10.27□□□□□ -0.77
TNRC6B-208ENST00000489500 FBXO11Q86XK2 927 aa10.27□□□□□ -0.77
TNRC6B-208ENST00000489500 FBXO16Q8IX29 292 aaPredicted RBP10.27□□□□□ -0.77
TNRC6B-208ENST00000489500 RPUSD2Q8IZ73 545 aaKnown RBP10.27□□□□□ -0.77
TNRC6B-208ENST00000489500 OR6J1Q8NGC5 347 aa10.27□□□□□ -0.77
TNRC6B-208ENST00000489500 SCFD2Q8WU76 684 aa10.27□□□□□ -0.77
TNRC6B-208ENST00000489500 ANKS1AQ92625 1134 aa10.27□□□□□ -0.77
TNRC6B-208ENST00000489500 KATNBL1Q9H079 304 aa10.27□□□□□ -0.77
TNRC6B-208ENST00000489500 MAP3K20Q9NYL2 800 aaKnown RBP10.27□□□□□ -0.77
TNRC6B-208ENST00000489500 ZSWIM5Q9P217 1185 aa10.27□□□□□ -0.77
TNRC6B-208ENST00000489500 GNEQ9Y223 722 aaKnown RBP10.27□□□□□ -0.77
TNRC6B-208ENST00000489500 TNKSO95271 1327 aa10.27□□□□□ -0.77
TNRC6B-208ENST00000489500 NEDD4P46934 1319 aa10.27□□□□□ -0.77
TNRC6B-208ENST00000489500 LRRC37A2A6NM11 1700 aa10.27□□□□□ -0.77
TNRC6B-208ENST00000489500 KIAA1217Q5T5P2 1943 aa10.27□□□□□ -0.77
TNRC6B-208ENST00000489500 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.26□□□□□ -0.77
TNRC6B-208ENST00000489500 MYADML2A6NDP7 307 aa10.26□□□□□ -0.77
TNRC6B-208ENST00000489500 NFIBO00712 420 aa10.26□□□□□ -0.77
TNRC6B-208ENST00000489500 DYRK3O43781 588 aa10.26□□□□□ -0.77
TNRC6B-208ENST00000489500 PRMT3O60678 531 aa10.26□□□□□ -0.77
TNRC6B-208ENST00000489500 GOLGA8HP0CJ92 632 aa10.26□□□□□ -0.77
TNRC6B-208ENST00000489500 RPS6P62753 249 aaKnown RBP10.26□□□□□ -0.77
TNRC6B-208ENST00000489500 CDC37Q16543 378 aaPredicted RBP10.26□□□□□ -0.77
TNRC6B-208ENST00000489500 TAPT1Q6NXT6 567 aa10.26□□□□□ -0.77
TNRC6B-208ENST00000489500 HFE2Q6ZVN8 426 aa10.26□□□□□ -0.77
TNRC6B-208ENST00000489500 Q7L0L9 218 aa10.26□□□□□ -0.77
TNRC6B-208ENST00000489500 TREML1Q86YW5 311 aa10.26□□□□□ -0.77
TNRC6B-208ENST00000489500 FMR1NBQ8N0W7 255 aaPredicted RBP10.26□□□□□ -0.77
TNRC6B-208ENST00000489500 SAMD3Q8N6K7 520 aa10.26□□□□□ -0.77
TNRC6B-208ENST00000489500 NSUN6Q8TEA1 469 aaKnown RBP10.26□□□□□ -0.77
TNRC6B-208ENST00000489500 IWS1Q96ST2 819 aa10.26□□□□□ -0.77
TNRC6B-208ENST00000489500 UBA5Q9GZZ9 404 aa10.26□□□□□ -0.77
TNRC6B-208ENST00000489500 MYH7BA7E2Y1 1941 aa10.26□□□□□ -0.77
TNRC6B-208ENST00000489500 LCTP09848 1927 aa10.26□□□□□ -0.77
TNRC6B-208ENST00000489500 MYL3P08590 195 aa10.25□□□□□ -0.77
TNRC6B-208ENST00000489500 STXBP2Q15833 593 aa10.25□□□□□ -0.77
TNRC6B-208ENST00000489500 PCSK7Q16549 785 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms