RNA–Protein interactions for RNA: ENST00000489378.5

SSBP1-212, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 1,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-212ENST00000489378 PLPP4Q5VZY2 271 aa10.69□□□□□ -0.7
SSBP1-212ENST00000489378 PPP1R18Q6NYC8 613 aa10.69□□□□□ -0.7
SSBP1-212ENST00000489378 KCNV1Q6PIU1 500 aa10.69□□□□□ -0.7
SSBP1-212ENST00000489378 KCNV2Q8TDN2 545 aa10.69□□□□□ -0.7
SSBP1-212ENST00000489378 HINFPQ9BQA5 517 aa10.69□□□□□ -0.7
SSBP1-212ENST00000489378 SEMA4AQ9H3S1 761 aa10.69□□□□□ -0.7
SSBP1-212ENST00000489378 TOMM22Q9NS69 142 aa10.69□□□□□ -0.7
SSBP1-212ENST00000489378 ANAPC4Q9UJX5 808 aa10.69□□□□□ -0.7
SSBP1-212ENST00000489378 RALYQ9UKM9 306 aaKnown RBP10.69□□□□□ -0.7
SSBP1-212ENST00000489378 HIDE1A8MVS5 230 aa10.68□□□□□ -0.7
SSBP1-212ENST00000489378 CFBP00751 764 aa10.68□□□□□ -0.7
SSBP1-212ENST00000489378 WEE2P0C1S8 567 aa10.68□□□□□ -0.7
SSBP1-212ENST00000489378 HOXB8P17481 243 aaPredicted RBP10.68□□□□□ -0.7
SSBP1-212ENST00000489378 IBSPP21815 317 aaPredicted RBP10.68□□□□□ -0.7
SSBP1-212ENST00000489378 TSHZ1Q6ZSZ6 1077 aa10.68□□□□□ -0.7
SSBP1-212ENST00000489378 VSIG10LQ86VR7 867 aa10.68□□□□□ -0.7
SSBP1-212ENST00000489378 USP26Q9BXU7 913 aa10.68□□□□□ -0.7
SSBP1-212ENST00000489378 LRRCC1Q9C099 1032 aa10.68□□□□□ -0.7
SSBP1-212ENST00000489378 TCP11L1Q9NUJ3 509 aa10.68□□□□□ -0.7
SSBP1-212ENST00000489378 TMEM260Q9NX78 707 aa10.68□□□□□ -0.7
SSBP1-212ENST00000489378 PCDHB12Q9Y5F1 795 aa10.68□□□□□ -0.7
SSBP1-212ENST00000489378 CDY2AQ9Y6F7 541 aa10.68□□□□□ -0.7
SSBP1-212ENST00000489378 LOXHD1Q8IVV2 1947 aa10.68□□□□□ -0.7
SSBP1-212ENST00000489378 FAM208BQ5VWN6 2430 aa10.68□□□□□ -0.7
SSBP1-212ENST00000489378 FNDC1Q4ZHG4 1894 aaPredicted RBP10.68□□□□□ -0.7
SSBP1-212ENST00000489378 NOP56O00567 594 aaKnown RBP10.67□□□□□ -0.7
SSBP1-212ENST00000489378 TGFB3P10600 412 aa10.67□□□□□ -0.7
SSBP1-212ENST00000489378 SCG2P13521 617 aa10.67□□□□□ -0.7
SSBP1-212ENST00000489378 HSD17B4P51659 736 aa10.67□□□□□ -0.7
SSBP1-212ENST00000489378 PGM5Q15124 567 aa10.67□□□□□ -0.7
SSBP1-212ENST00000489378 QRICH1Q2TAL8 776 aa10.67□□□□□ -0.7
SSBP1-212ENST00000489378 ZMYM1Q5SVZ6 1142 aa10.67□□□□□ -0.7
SSBP1-212ENST00000489378 SPOUT1Q5T280 376 aaKnown RBP10.67□□□□□ -0.7
SSBP1-212ENST00000489378 GPATCH4Q5T3I0 446 aaKnown RBP10.67□□□□□ -0.7
SSBP1-212ENST00000489378 UTP14CQ5TAP6 766 aaKnown RBP10.67□□□□□ -0.7
SSBP1-212ENST00000489378 VPS53Q5VIR6 699 aa10.67□□□□□ -0.7
SSBP1-212ENST00000489378 ADGRF4Q8IZF3 695 aa10.67□□□□□ -0.7
SSBP1-212ENST00000489378 ZDHHC14Q8IZN3 488 aa10.67□□□□□ -0.7
SSBP1-212ENST00000489378 TDRD5Q8NAT2 981 aaKnown RBP10.67□□□□□ -0.7
SSBP1-212ENST00000489378 RASGRP4Q8TDF6 673 aa10.67□□□□□ -0.7
SSBP1-212ENST00000489378 DNAJB3Q8WWF6 145 aa10.67□□□□□ -0.7
SSBP1-212ENST00000489378 RIN2Q8WYP3 895 aaPredicted RBP10.67□□□□□ -0.7
SSBP1-212ENST00000489378 RUBCNQ92622 972 aa10.67□□□□□ -0.7
SSBP1-212ENST00000489378 GPR20Q99678 358 aa10.67□□□□□ -0.7
SSBP1-212ENST00000489378 ADAM7Q9H2U9 754 aa10.67□□□□□ -0.7
SSBP1-212ENST00000489378 ERVK-5Q9HDB9 667 aa10.67□□□□□ -0.7
SSBP1-212ENST00000489378 MRPL11Q9Y3B7 192 aaKnown RBP10.67□□□□□ -0.7
SSBP1-212ENST00000489378 FANCMQ8IYD8 2048 aa10.67□□□□□ -0.7
SSBP1-212ENST00000489378 STAG3L1P0CL83 205 aa10.67□□□□□ -0.7
SSBP1-212ENST00000489378 HOXA13P31271 388 aaPredicted RBP10.67□□□□□ -0.7
SSBP1-212ENST00000489378 PDE12Q6L8Q7 609 aaKnown RBP10.67□□□□□ -0.7
SSBP1-212ENST00000489378 TAF2Q6P1X5 1199 aa10.67□□□□□ -0.7
SSBP1-212ENST00000489378 THNSL1Q8IYQ7 743 aa10.67□□□□□ -0.7
SSBP1-212ENST00000489378 SIX5Q8N196 739 aa10.67□□□□□ -0.7
SSBP1-212ENST00000489378 COLGALT1Q8NBJ5 622 aa10.67□□□□□ -0.7
SSBP1-212ENST00000489378 ZBTB10Q96DT7 871 aa10.67□□□□□ -0.7
SSBP1-212ENST00000489378 NECTIN4Q96NY8 510 aa10.67□□□□□ -0.7
SSBP1-212ENST00000489378 TCF25Q9BQ70 676 aa10.67□□□□□ -0.7
SSBP1-212ENST00000489378 RTP3Q9BQQ7 232 aa10.67□□□□□ -0.7
SSBP1-212ENST00000489378 ZNF215Q9UL58 517 aaPredicted RBP10.67□□□□□ -0.7
SSBP1-212ENST00000489378 FASNP49327 2511 aaKnown RBP10.66□□□□□ -0.7
SSBP1-212ENST00000489378 CACNA1IQ9P0X4 2223 aa10.66□□□□□ -0.7
SSBP1-212ENST00000489378 NRCAMQ92823 1304 aa10.66□□□□□ -0.7
SSBP1-212ENST00000489378 RNF40O75150 1001 aa10.66□□□□□ -0.7
SSBP1-212ENST00000489378 MRPS6P82932 125 aaKnown RBP10.66□□□□□ -0.7
SSBP1-212ENST00000489378 GHRHRQ02643 423 aa10.66□□□□□ -0.7
SSBP1-212ENST00000489378 SEMA3FQ13275 785 aa10.66□□□□□ -0.7
SSBP1-212ENST00000489378 COL9A2Q14055 689 aaPredicted RBP10.66□□□□□ -0.7
SSBP1-212ENST00000489378 CES5AQ6NT32 575 aa10.66□□□□□ -0.7
SSBP1-212ENST00000489378 KANK3Q6NY19 840 aa10.66□□□□□ -0.7
SSBP1-212ENST00000489378 METTL7BQ6UX53 244 aa10.66□□□□□ -0.7
SSBP1-212ENST00000489378 Q6ZNB5 142 aa10.66□□□□□ -0.7
SSBP1-212ENST00000489378 STOX1Q6ZVD7 989 aa10.66□□□□□ -0.7
SSBP1-212ENST00000489378 CYFIP1Q7L576 1253 aa10.66□□□□□ -0.7
SSBP1-212ENST00000489378 RSPH3Q86UC2 560 aa10.66□□□□□ -0.7
SSBP1-212ENST00000489378 FEZF2Q8TBJ5 459 aa10.66□□□□□ -0.7
SSBP1-212ENST00000489378 FTHL17Q9BXU8 183 aa10.66□□□□□ -0.7
SSBP1-212ENST00000489378 TMX1Q9H3N1 280 aa10.66□□□□□ -0.7
SSBP1-212ENST00000489378 AAASQ9NRG9 546 aa10.66□□□□□ -0.7
SSBP1-212ENST00000489378 ZBTB40Q9NUA8 1239 aa10.66□□□□□ -0.7
SSBP1-212ENST00000489378 LRFN2Q9ULH4 789 aa10.66□□□□□ -0.7
SSBP1-212ENST00000489378 TBKBP1A7MCY6 615 aa10.65□□□□□ -0.7
SSBP1-212ENST00000489378 CCND2P30279 289 aa10.65□□□□□ -0.7
SSBP1-212ENST00000489378 MTHFRP42898 656 aa10.65□□□□□ -0.7
SSBP1-212ENST00000489378 ATXN1P54253 815 aaKnown RBP10.65□□□□□ -0.7
SSBP1-212ENST00000489378 SP4Q02446 784 aa10.65□□□□□ -0.7
SSBP1-212ENST00000489378 ITIH3Q06033 890 aa10.65□□□□□ -0.7
SSBP1-212ENST00000489378 PPFIA1Q13136 1202 aa10.65□□□□□ -0.7
SSBP1-212ENST00000489378 PTGDRQ13258 359 aa10.65□□□□□ -0.7
SSBP1-212ENST00000489378 MARCH8Q5T0T0 291 aa10.65□□□□□ -0.7
SSBP1-212ENST00000489378 FAM102BQ5T8I3 360 aa10.65□□□□□ -0.7
SSBP1-212ENST00000489378 C12orf76Q8N812 135 aaPredicted RBP10.65□□□□□ -0.7
SSBP1-212ENST00000489378 CASP10Q92851 521 aa10.65□□□□□ -0.7
SSBP1-212ENST00000489378 TTC14Q96N46 770 aa10.65□□□□□ -0.7
SSBP1-212ENST00000489378 PRKD2Q9BZL6 878 aa10.65□□□□□ -0.7
SSBP1-212ENST00000489378 JMJD4Q9H9V9 463 aa10.65□□□□□ -0.7
SSBP1-212ENST00000489378 VAT1LQ9HCJ6 419 aa10.65□□□□□ -0.7
SSBP1-212ENST00000489378 ENTPD7Q9NQZ7 604 aa10.65□□□□□ -0.7
SSBP1-212ENST00000489378 TYW1Q9NV66 732 aaKnown RBP10.65□□□□□ -0.7
SSBP1-212ENST00000489378 TUBE1Q9UJT0 475 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 91.9 ms