RNA–Protein interactions for RNA: ENST00000489049.5

PDCD4-209, Transcript of programmed cell death 4, humanhuman

TSL 2

Gene PDCD4, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-209ENST00000489049 LONRF3Q496Y0 759 aa7.48□□□□□ -1.21
PDCD4-209ENST00000489049 DTHD1Q6ZMT9 781 aa7.48□□□□□ -1.21
PDCD4-209ENST00000489049 TMEM179Q6ZVK1 233 aa7.48□□□□□ -1.21
PDCD4-209ENST00000489049 ZNF438Q7Z4V0 828 aa7.48□□□□□ -1.21
PDCD4-209ENST00000489049 ATCAYQ86WG3 371 aa7.48□□□□□ -1.21
PDCD4-209ENST00000489049 ZDHHC13Q8IUH4 622 aa7.48□□□□□ -1.21
PDCD4-209ENST00000489049 DHX40Q8IX18 779 aaKnown RBP7.48□□□□□ -1.21
PDCD4-209ENST00000489049 DRC7Q8IY82 874 aa7.48□□□□□ -1.21
PDCD4-209ENST00000489049 SNED1Q8TER0 1413 aa7.48□□□□□ -1.21
PDCD4-209ENST00000489049 GTF3C2Q8WUA4 911 aaPredicted RBP7.48□□□□□ -1.21
PDCD4-209ENST00000489049 PIBF1Q8WXW3 757 aa7.48□□□□□ -1.21
PDCD4-209ENST00000489049 CCDC47Q96A33 483 aaKnown RBP7.48□□□□□ -1.21
PDCD4-209ENST00000489049 KLHDC7BQ96G42 594 aa7.48□□□□□ -1.21
PDCD4-209ENST00000489049 CEP95Q96GE4 821 aa7.48□□□□□ -1.21
PDCD4-209ENST00000489049 MYRFLQ96LU7 910 aa7.48□□□□□ -1.21
PDCD4-209ENST00000489049 GPR101Q96P66 508 aaPredicted RBP7.48□□□□□ -1.21
PDCD4-209ENST00000489049 LRRC27Q9C0I9 530 aa7.48□□□□□ -1.21
PDCD4-209ENST00000489049 C7orf69Q9H7B7 122 aa7.48□□□□□ -1.21
PDCD4-209ENST00000489049 RRAGDQ9NQL2 400 aaPredicted RBP7.48□□□□□ -1.21
PDCD4-209ENST00000489049 GINM1Q9NU53 330 aa7.48□□□□□ -1.21
PDCD4-209ENST00000489049 SPTLC3Q9NUV7 552 aa7.48□□□□□ -1.21
PDCD4-209ENST00000489049 MYH1P12882 1939 aa7.48□□□□□ -1.21
PDCD4-209ENST00000489049 H3BRJ5 948 aa7.47□□□□□ -1.21
PDCD4-209ENST00000489049 POLR2DO15514 142 aaKnown RBP7.47□□□□□ -1.21
PDCD4-209ENST00000489049 PDHBP11177 359 aa7.47□□□□□ -1.21
PDCD4-209ENST00000489049 KCNJ6P48051 423 aa7.47□□□□□ -1.21
PDCD4-209ENST00000489049 NAPAP54920 295 aa7.47□□□□□ -1.21
PDCD4-209ENST00000489049 AMPD3Q01432 767 aa7.47□□□□□ -1.21
PDCD4-209ENST00000489049 ZNF543Q08ER8 600 aa7.47□□□□□ -1.21
PDCD4-209ENST00000489049 MORC3Q14149 939 aa7.47□□□□□ -1.21
PDCD4-209ENST00000489049 TATDN1Q6P1N9 297 aa7.47□□□□□ -1.21
PDCD4-209ENST00000489049 PIK3AP1Q6ZUJ8 805 aa7.47□□□□□ -1.21
PDCD4-209ENST00000489049 HEATR3Q7Z4Q2 680 aa7.47□□□□□ -1.21
PDCD4-209ENST00000489049 TRIM42Q8IWZ5 723 aa7.47□□□□□ -1.21
PDCD4-209ENST00000489049 REXO1Q8N1G1 1221 aaKnown RBP7.47□□□□□ -1.21
PDCD4-209ENST00000489049 CCDC150Q8NCX0 1101 aa7.47□□□□□ -1.21
PDCD4-209ENST00000489049 GMCL1P1Q8NEA9 526 aa7.47□□□□□ -1.21
PDCD4-209ENST00000489049 AGBL3Q8NEM8 1001 aa7.47□□□□□ -1.21
PDCD4-209ENST00000489049 ENOX1Q8TC92 643 aaKnown RBP7.47□□□□□ -1.21
PDCD4-209ENST00000489049 WNT8BQ93098 351 aa7.47□□□□□ -1.21
PDCD4-209ENST00000489049 CCSER1Q9C0I3 900 aa7.47□□□□□ -1.21
PDCD4-209ENST00000489049 CSRNP2Q9H175 543 aa7.47□□□□□ -1.21
PDCD4-209ENST00000489049 KCND1Q9NSA2 647 aa7.47□□□□□ -1.21
PDCD4-209ENST00000489049 CNTN3Q9P232 1028 aa7.47□□□□□ -1.21
PDCD4-209ENST00000489049 CLIP2Q9UDT6 1046 aa7.47□□□□□ -1.21
PDCD4-209ENST00000489049 SALL4Q9UJQ4 1053 aa7.47□□□□□ -1.21
PDCD4-209ENST00000489049 PNMA2Q9UL42 364 aa7.47□□□□□ -1.21
PDCD4-209ENST00000489049 PCDHA5Q9Y5H7 936 aa7.47□□□□□ -1.21
PDCD4-209ENST00000489049 SMCO2A6NFE2 343 aa7.46□□□□□ -1.22
PDCD4-209ENST00000489049 SMIM22K7EJ46 135 aa7.46□□□□□ -1.22
PDCD4-209ENST00000489049 KIF2AO00139 706 aaPredicted RBP7.46□□□□□ -1.22
PDCD4-209ENST00000489049 CCP110O43303 1012 aa7.46□□□□□ -1.22
PDCD4-209ENST00000489049 VIL1P09327 827 aaKnown RBP7.46□□□□□ -1.22
PDCD4-209ENST00000489049 SHMT1P34896 483 aa7.46□□□□□ -1.22
PDCD4-209ENST00000489049 UBA7P41226 1012 aa7.46□□□□□ -1.22
PDCD4-209ENST00000489049 ADCY7P51828 1080 aa7.46□□□□□ -1.22
PDCD4-209ENST00000489049 MTMR3Q13615 1198 aa7.46□□□□□ -1.22
PDCD4-209ENST00000489049 PDIA5Q14554 519 aa7.46□□□□□ -1.22
PDCD4-209ENST00000489049 CERKLQ49MI3 558 aaPredicted RBP7.46□□□□□ -1.22
PDCD4-209ENST00000489049 RNF43Q68DV7 783 aa7.46□□□□□ -1.22
PDCD4-209ENST00000489049 WWC2Q6AWC2 1192 aa7.46□□□□□ -1.22
PDCD4-209ENST00000489049 PPP4R3AQ6IN85 833 aa7.46□□□□□ -1.22
PDCD4-209ENST00000489049 MOXD1Q6UVY6 613 aa7.46□□□□□ -1.22
PDCD4-209ENST00000489049 XKR5Q6UX68 686 aa7.46□□□□□ -1.22
PDCD4-209ENST00000489049 C11orf57Q6ZUT1 292 aaPredicted RBP7.46□□□□□ -1.22
PDCD4-209ENST00000489049 NEK8Q86SG6 692 aa7.46□□□□□ -1.22
PDCD4-209ENST00000489049 KRTAP19-1Q8IUB9 90 aa7.46□□□□□ -1.22
PDCD4-209ENST00000489049 AOPEPQ8N6M6 819 aa7.46□□□□□ -1.22
PDCD4-209ENST00000489049 C4orf32Q8N8J7 132 aa7.46□□□□□ -1.22
PDCD4-209ENST00000489049 SLC44A5Q8NCS7 719 aa7.46□□□□□ -1.22
PDCD4-209ENST00000489049 HELQQ8TDG4 1101 aa7.46□□□□□ -1.22
PDCD4-209ENST00000489049 MTMR8Q96EF0 704 aa7.46□□□□□ -1.22
PDCD4-209ENST00000489049 CLIC6Q96NY7 704 aa7.46□□□□□ -1.22
PDCD4-209ENST00000489049 CTAGE1Q96RT6 745 aa7.46□□□□□ -1.22
PDCD4-209ENST00000489049 SH2D4AQ9H788 454 aa7.46□□□□□ -1.22
PDCD4-209ENST00000489049 RIC8AQ9NPQ8 531 aa7.46□□□□□ -1.22
PDCD4-209ENST00000489049 PCDHA6Q9UN73 950 aa7.46□□□□□ -1.22
PDCD4-209ENST00000489049 PCDHA8Q9Y5H6 950 aa7.46□□□□□ -1.22
PDCD4-209ENST00000489049 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.46□□□□□ -1.22
PDCD4-209ENST00000489049 ECM29Q5VYK3 1845 aa7.45□□□□□ -1.22
PDCD4-209ENST00000489049 CDK5RAP2Q96SN8 1893 aa7.45□□□□□ -1.22
PDCD4-209ENST00000489049 COL11A2P13942 1736 aaPredicted RBP7.45□□□□□ -1.22
PDCD4-209ENST00000489049 HMX2A2RU54 273 aa7.45□□□□□ -1.22
PDCD4-209ENST00000489049 NFKBIEO00221 500 aa7.45□□□□□ -1.22
PDCD4-209ENST00000489049 ZBTB5O15062 677 aa7.45□□□□□ -1.22
PDCD4-209ENST00000489049 PPIP5K2O43314 1243 aa7.45□□□□□ -1.22
PDCD4-209ENST00000489049 CYTH3O43739 400 aa7.45□□□□□ -1.22
PDCD4-209ENST00000489049 PLA2G6O60733 806 aa7.45□□□□□ -1.22
PDCD4-209ENST00000489049 FOSP01100 380 aaPredicted RBP7.45□□□□□ -1.22
PDCD4-209ENST00000489049 RPLP1P05386 114 aaKnown RBP7.45□□□□□ -1.22
PDCD4-209ENST00000489049 TPM2P07951 284 aa7.45□□□□□ -1.22
PDCD4-209ENST00000489049 AKR1B1P15121 316 aa7.45□□□□□ -1.22
PDCD4-209ENST00000489049 ACPPP15309 386 aa7.45□□□□□ -1.22
PDCD4-209ENST00000489049 RPS12P25398 132 aaKnown RBP7.45□□□□□ -1.22
PDCD4-209ENST00000489049 USP11P51784 963 aa7.45□□□□□ -1.22
PDCD4-209ENST00000489049 SPAG1Q07617 926 aa7.45□□□□□ -1.22
PDCD4-209ENST00000489049 PICALMQ13492 652 aa7.45□□□□□ -1.22
PDCD4-209ENST00000489049 KCNB1Q14721 858 aa7.45□□□□□ -1.22
PDCD4-209ENST00000489049 SEPT2Q15019 361 aa7.45□□□□□ -1.22
PDCD4-209ENST00000489049 TNIP1Q15025 636 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms