RNA–Protein interactions for RNA: ENST00000489028.1

RFC4-213, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-213ENST00000489028 LARP4Q71RC2 724 aaKnown RBP eCLIP5.41□□□□□ -1.54
RFC4-213ENST00000489028 RALYLQ86SE5 291 aaKnown RBP5.41□□□□□ -1.54
RFC4-213ENST00000489028 REXO1L1PQ8IX06 675 aa5.41□□□□□ -1.54
RFC4-213ENST00000489028 NXPE1Q8N323 547 aa5.41□□□□□ -1.54
RFC4-213ENST00000489028 ZDHHC5Q9C0B5 715 aa5.41□□□□□ -1.54
RFC4-213ENST00000489028 MEGF9Q9H1U4 602 aa5.41□□□□□ -1.54
RFC4-213ENST00000489028 OR10A5Q9H207 317 aa5.41□□□□□ -1.54
RFC4-213ENST00000489028 PPP4R1LQ9P1A2 415 aa5.41□□□□□ -1.54
RFC4-213ENST00000489028 H7C1D1 291 aa5.4□□□□□ -1.54
RFC4-213ENST00000489028 LAMTOR5O43504 91 aa5.4□□□□□ -1.54
RFC4-213ENST00000489028 IGSF3O75054 1194 aa5.4□□□□□ -1.54
RFC4-213ENST00000489028 SLC9A1P19634 815 aa5.4□□□□□ -1.54
RFC4-213ENST00000489028 ETV4P43268 484 aa5.4□□□□□ -1.54
RFC4-213ENST00000489028 FNTBP49356 437 aa5.4□□□□□ -1.54
RFC4-213ENST00000489028 NEK4P51957 841 aa5.4□□□□□ -1.54
RFC4-213ENST00000489028 EPHB4P54760 987 aa5.4□□□□□ -1.54
RFC4-213ENST00000489028 ALDH6A1Q02252 535 aaKnown RBP5.4□□□□□ -1.54
RFC4-213ENST00000489028 PLP2Q04941 152 aa5.4□□□□□ -1.54
RFC4-213ENST00000489028 PLEKHG4Q58EX7 1191 aa5.4□□□□□ -1.54
RFC4-213ENST00000489028 CXXC5Q7LFL8 322 aaKnown RBP5.4□□□□□ -1.54
RFC4-213ENST00000489028 LIMS2Q7Z4I7 341 aa5.4□□□□□ -1.54
RFC4-213ENST00000489028 MFSD3Q96ES6 412 aa5.4□□□□□ -1.54
RFC4-213ENST00000489028 C16orf92Q96LL3 132 aa5.4□□□□□ -1.54
RFC4-213ENST00000489028 ELF4Q99607 663 aaPredicted RBP5.4□□□□□ -1.54
RFC4-213ENST00000489028 OXSMQ9NWU1 459 aa5.4□□□□□ -1.54
RFC4-213ENST00000489028 CDC42EP3Q9UKI2 254 aa5.4□□□□□ -1.54
RFC4-213ENST00000489028 PLAAQ9Y263 795 aa5.4□□□□□ -1.54
RFC4-213ENST00000489028 A0A087X0B3 334 aa5.39□□□□□ -1.55
RFC4-213ENST00000489028 TLDC2A0PJX2 215 aa5.39□□□□□ -1.55
RFC4-213ENST00000489028 GSG1L2A8MUP6 293 aa5.39□□□□□ -1.55
RFC4-213ENST00000489028 CUTAO60888 179 aa5.39□□□□□ -1.55
RFC4-213ENST00000489028 F2P00734 622 aa5.39□□□□□ -1.55
RFC4-213ENST00000489028 RANGAP1P46060 587 aaPredicted RBP5.39□□□□□ -1.55
RFC4-213ENST00000489028 RGS3P49796 1198 aa5.39□□□□□ -1.55
RFC4-213ENST00000489028 KCNQ1P51787 676 aa5.39□□□□□ -1.55
RFC4-213ENST00000489028 PPP2CBP62714 309 aa5.39□□□□□ -1.55
RFC4-213ENST00000489028 PPP2CAP67775 309 aa5.39□□□□□ -1.55
RFC4-213ENST00000489028 USP10Q14694 798 aaKnown RBP5.39□□□□□ -1.55
RFC4-213ENST00000489028 TMEM200BQ69YZ2 307 aa5.39□□□□□ -1.55
RFC4-213ENST00000489028 PLEKHH3Q7Z736 793 aa5.39□□□□□ -1.55
RFC4-213ENST00000489028 BCL6BQ8N143 479 aaPredicted RBP5.39□□□□□ -1.55
RFC4-213ENST00000489028 FOXB1Q99853 325 aa5.39□□□□□ -1.55
RFC4-213ENST00000489028 KIAA1683Q9H0B3 1180 aa5.39□□□□□ -1.55
RFC4-213ENST00000489028 PCIF1Q9H4Z3 704 aa5.39□□□□□ -1.55
RFC4-213ENST00000489028 ACSS2Q9NR19 701 aa5.39□□□□□ -1.55
RFC4-213ENST00000489028 SLC4A7Q9Y6M7 1214 aa5.39□□□□□ -1.55
RFC4-213ENST00000489028 K7ESM1 405 aa5.38□□□□□ -1.55
RFC4-213ENST00000489028 GPR42O15529 346 aa5.38□□□□□ -1.55
RFC4-213ENST00000489028 PRLP01236 227 aa5.38□□□□□ -1.55
RFC4-213ENST00000489028 RRADP55042 308 aa5.38□□□□□ -1.55
RFC4-213ENST00000489028 SLC6A3Q01959 620 aa5.38□□□□□ -1.55
RFC4-213ENST00000489028 EFEMP1Q12805 493 aa5.38□□□□□ -1.55
RFC4-213ENST00000489028 MOGSQ13724 837 aa5.38□□□□□ -1.55
RFC4-213ENST00000489028 NOLC1Q14978 699 aaKnown RBP eCLIP5.38□□□□□ -1.55
RFC4-213ENST00000489028 EIF4HQ15056 248 aaKnown RBP5.38□□□□□ -1.55
RFC4-213ENST00000489028 TBR1Q16650 682 aa5.38□□□□□ -1.55
RFC4-213ENST00000489028 ARHGEF18Q6ZSZ5 1173 aa5.38□□□□□ -1.55
RFC4-213ENST00000489028 KIF18BQ86Y91 864 aa5.38□□□□□ -1.55
RFC4-213ENST00000489028 CHTF18Q8WVB6 975 aa5.38□□□□□ -1.55
RFC4-213ENST00000489028 CARD11Q9BXL7 1154 aa5.38□□□□□ -1.55
RFC4-213ENST00000489028 ZMAT4Q9H898 229 aa5.38□□□□□ -1.55
RFC4-213ENST00000489028 ZNF536O15090 1300 aa5.38□□□□□ -1.55
RFC4-213ENST00000489028 A0A0G2JNJ9 132 aa5.37□□□□□ -1.55
RFC4-213ENST00000489028 TGM5O43548 720 aa5.37□□□□□ -1.55
RFC4-213ENST00000489028 HMGCRP04035 888 aa5.37□□□□□ -1.55
RFC4-213ENST00000489028 STAT5BP51692 787 aa5.37□□□□□ -1.55
RFC4-213ENST00000489028 GYS2P54840 703 aa5.37□□□□□ -1.55
RFC4-213ENST00000489028 NFKB2Q00653 900 aa5.37□□□□□ -1.55
RFC4-213ENST00000489028 EPHA7Q15375 998 aa5.37□□□□□ -1.55
RFC4-213ENST00000489028 SURF1Q15526 300 aa5.37□□□□□ -1.55
RFC4-213ENST00000489028 ZNF174Q15697 407 aa5.37□□□□□ -1.55
RFC4-213ENST00000489028 ZNF827Q17R98 1081 aa5.37□□□□□ -1.55
RFC4-213ENST00000489028 RNF151Q2KHN1 245 aa5.37□□□□□ -1.55
RFC4-213ENST00000489028 TRIM68Q6AZZ1 485 aa5.37□□□□□ -1.55
RFC4-213ENST00000489028 GRAMD4Q6IC98 578 aa5.37□□□□□ -1.55
RFC4-213ENST00000489028 OTOP2Q7RTS6 562 aa5.37□□□□□ -1.55
RFC4-213ENST00000489028 KRTAP3-1Q9BYR8 98 aa5.37□□□□□ -1.55
RFC4-213ENST00000489028 THG1LQ9NWX6 298 aaKnown RBP5.37□□□□□ -1.55
RFC4-213ENST00000489028 Q9UFV3 132 aa5.37□□□□□ -1.55
RFC4-213ENST00000489028 MAGEL2Q9UJ55 1249 aa5.37□□□□□ -1.55
RFC4-213ENST00000489028 FBXO10Q9UK96 956 aa5.37□□□□□ -1.55
RFC4-213ENST00000489028 SPO11Q9Y5K1 396 aa5.37□□□□□ -1.55
RFC4-213ENST00000489028 UBA6A0AVT1 1052 aaPredicted RBP5.36□□□□□ -1.55
RFC4-213ENST00000489028 MATN2O00339 956 aa5.36□□□□□ -1.55
RFC4-213ENST00000489028 MAFO75444 373 aaPredicted RBP5.36□□□□□ -1.55
RFC4-213ENST00000489028 CYP17A1P05093 508 aa5.36□□□□□ -1.55
RFC4-213ENST00000489028 APEX1P27695 318 aaKnown RBP5.36□□□□□ -1.55
RFC4-213ENST00000489028 MYBPC3Q14896 1274 aa5.36□□□□□ -1.55
RFC4-213ENST00000489028 PCOLCEQ15113 449 aa5.36□□□□□ -1.55
RFC4-213ENST00000489028 SDE2Q6IQ49 451 aa5.36□□□□□ -1.55
RFC4-213ENST00000489028 PRRT2Q7Z6L0 340 aaPredicted RBP5.36□□□□□ -1.55
RFC4-213ENST00000489028 FILIP1Q7Z7B0 1213 aa5.36□□□□□ -1.55
RFC4-213ENST00000489028 PPM1KQ8N3J5 372 aa5.36□□□□□ -1.55
RFC4-213ENST00000489028 SMC1BQ8NDV3 1235 aa5.36□□□□□ -1.55
RFC4-213ENST00000489028 CALML6Q8TD86 181 aa5.36□□□□□ -1.55
RFC4-213ENST00000489028 MAML3Q96JK9 1138 aa5.36□□□□□ -1.55
RFC4-213ENST00000489028 GNRHR2Q96P88 292 aa5.36□□□□□ -1.55
RFC4-213ENST00000489028 KRTAP9-3Q9BYQ3 159 aa5.36□□□□□ -1.55
RFC4-213ENST00000489028 KRTAP4-9Q9BYQ8 210 aa5.36□□□□□ -1.55
RFC4-213ENST00000489028 MS4A5Q9H3V2 200 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms