RNA–Protein interactions for RNA: ENST00000488896.1

PTPN4-212, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 575 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-212ENST00000488896 ASB1Q9Y576 335 aa7.06□□□□□ -1.28
PTPN4-212ENST00000488896 GOLGA6L22H0YM25 854 aa7.05□□□□□ -1.28
PTPN4-212ENST00000488896 TRAF5O00463 557 aa7.05□□□□□ -1.28
PTPN4-212ENST00000488896 CUTAO60888 179 aa7.05□□□□□ -1.28
PTPN4-212ENST00000488896 SDHAP31040 664 aa7.05□□□□□ -1.28
PTPN4-212ENST00000488896 ICAM4Q14773 271 aa7.05□□□□□ -1.28
PTPN4-212ENST00000488896 TCEA2Q15560 299 aa7.05□□□□□ -1.28
PTPN4-212ENST00000488896 CDCA2Q69YH5 1023 aaPredicted RBP7.05□□□□□ -1.28
PTPN4-212ENST00000488896 OTOP1Q7RTM1 612 aa7.05□□□□□ -1.28
PTPN4-212ENST00000488896 ZDHHC5Q9C0B5 715 aa7.05□□□□□ -1.28
PTPN4-212ENST00000488896 MEGF9Q9H1U4 602 aa7.05□□□□□ -1.28
PTPN4-212ENST00000488896 PCIF1Q9H4Z3 704 aa7.05□□□□□ -1.28
PTPN4-212ENST00000488896 MRPL42Q9Y6G3 142 aaKnown RBP7.05□□□□□ -1.28
PTPN4-212ENST00000488896 SLC4A7Q9Y6M7 1214 aa7.05□□□□□ -1.28
PTPN4-212ENST00000488896 DVL2O14641 736 aa7.04□□□□□ -1.28
PTPN4-212ENST00000488896 INSRRP14616 1297 aa7.04□□□□□ -1.28
PTPN4-212ENST00000488896 ETV4P43268 484 aa7.04□□□□□ -1.28
PTPN4-212ENST00000488896 ADAM17P78536 824 aa7.04□□□□□ -1.28
PTPN4-212ENST00000488896 MOGSQ13724 837 aa7.04□□□□□ -1.28
PTPN4-212ENST00000488896 STILQ15468 1287 aa7.04□□□□□ -1.28
PTPN4-212ENST00000488896 TKFCQ3LXA3 575 aa7.04□□□□□ -1.28
PTPN4-212ENST00000488896 KANK2Q63ZY3 851 aa7.04□□□□□ -1.28
PTPN4-212ENST00000488896 CC2D1AQ6P1N0 951 aaPredicted RBP7.04□□□□□ -1.28
PTPN4-212ENST00000488896 LARP4Q71RC2 724 aaKnown RBP eCLIP7.04□□□□□ -1.28
PTPN4-212ENST00000488896 CXXC5Q7LFL8 322 aaKnown RBP7.04□□□□□ -1.28
PTPN4-212ENST00000488896 CALML6Q8TD86 181 aa7.04□□□□□ -1.28
PTPN4-212ENST00000488896 APPBP2Q92624 585 aa7.04□□□□□ -1.28
PTPN4-212ENST00000488896 KRTAP9-3Q9BYQ3 159 aa7.04□□□□□ -1.28
PTPN4-212ENST00000488896 H7C1D1 291 aa7.03□□□□□ -1.28
PTPN4-212ENST00000488896 KPNA6O60684 536 aa7.03□□□□□ -1.28
PTPN4-212ENST00000488896 STAT5BP51692 787 aa7.03□□□□□ -1.28
PTPN4-212ENST00000488896 NEK4P51957 841 aa7.03□□□□□ -1.28
PTPN4-212ENST00000488896 ZNF174Q15697 407 aa7.03□□□□□ -1.28
PTPN4-212ENST00000488896 RNF151Q2KHN1 245 aa7.03□□□□□ -1.28
PTPN4-212ENST00000488896 ZNF585AQ6P3V2 769 aa7.03□□□□□ -1.28
PTPN4-212ENST00000488896 CNNM4Q6P4Q7 775 aa7.03□□□□□ -1.28
PTPN4-212ENST00000488896 FILIP1Q7Z7B0 1213 aa7.03□□□□□ -1.28
PTPN4-212ENST00000488896 GGNQ86UU5 652 aa7.03□□□□□ -1.28
PTPN4-212ENST00000488896 RTKN2Q8IZC4 609 aa7.03□□□□□ -1.28
PTPN4-212ENST00000488896 KIAA1958Q8N8K9 716 aa7.03□□□□□ -1.28
PTPN4-212ENST00000488896 GIMAP8Q8ND71 665 aaPredicted RBP7.03□□□□□ -1.28
PTPN4-212ENST00000488896 NEIL1Q96FI4 390 aaPredicted RBP7.03□□□□□ -1.28
PTPN4-212ENST00000488896 C12orf65Q9H3J6 166 aaKnown RBP7.03□□□□□ -1.28
PTPN4-212ENST00000488896 DEF6Q9H4E7 631 aa7.03□□□□□ -1.28
PTPN4-212ENST00000488896 USP35Q9P2H5 1018 aa7.03□□□□□ -1.28
PTPN4-212ENST00000488896 MAGEC2Q9UBF1 373 aaPredicted RBP7.03□□□□□ -1.28
PTPN4-212ENST00000488896 MAGEL2Q9UJ55 1249 aa7.03□□□□□ -1.28
PTPN4-212ENST00000488896 FBXO10Q9UK96 956 aa7.03□□□□□ -1.28
PTPN4-212ENST00000488896 FAM184BQ9ULE4 1060 aa7.03□□□□□ -1.28
PTPN4-212ENST00000488896 NR2E1Q9Y466 385 aa7.03□□□□□ -1.28
PTPN4-212ENST00000488896 A0A0G2JNJ9 132 aa7.02□□□□□ -1.29
PTPN4-212ENST00000488896 CBX4O00257 560 aa7.02□□□□□ -1.29
PTPN4-212ENST00000488896 RFPL3O75679 317 aa7.02□□□□□ -1.29
PTPN4-212ENST00000488896 ZNF20P17024 532 aa7.02□□□□□ -1.29
PTPN4-212ENST00000488896 SLC9A1P19634 815 aa7.02□□□□□ -1.29
PTPN4-212ENST00000488896 RAC3P60763 192 aa7.02□□□□□ -1.29
PTPN4-212ENST00000488896 PCOLCEQ15113 449 aa7.02□□□□□ -1.29
PTPN4-212ENST00000488896 ZMAT1Q5H9K5 638 aa7.02□□□□□ -1.29
PTPN4-212ENST00000488896 GRAMD4Q6IC98 578 aa7.02□□□□□ -1.29
PTPN4-212ENST00000488896 C16orf86Q6ZW13 317 aa7.02□□□□□ -1.29
PTPN4-212ENST00000488896 RTN4RL1Q86UN2 441 aaPredicted RBP7.02□□□□□ -1.29
PTPN4-212ENST00000488896 TAX1BP1Q86VP1 789 aa7.02□□□□□ -1.29
PTPN4-212ENST00000488896 DHX37Q8IY37 1157 aaKnown RBP7.02□□□□□ -1.29
PTPN4-212ENST00000488896 FOXRED1Q96CU9 486 aaPredicted RBP7.02□□□□□ -1.29
PTPN4-212ENST00000488896 SCYL1Q96KG9 808 aa7.02□□□□□ -1.29
PTPN4-212ENST00000488896 SEC61A2Q9H9S3 476 aa7.02□□□□□ -1.29
PTPN4-212ENST00000488896 Q9UFV3 132 aa7.02□□□□□ -1.29
PTPN4-212ENST00000488896 CDC45O75419 566 aa7.01□□□□□ -1.29
PTPN4-212ENST00000488896 PTX3P26022 381 aaPredicted RBP7.01□□□□□ -1.29
PTPN4-212ENST00000488896 APEX1P27695 318 aaKnown RBP7.01□□□□□ -1.29
PTPN4-212ENST00000488896 MEOX1P50221 254 aa7.01□□□□□ -1.29
PTPN4-212ENST00000488896 SLC6A3Q01959 620 aa7.01□□□□□ -1.29
PTPN4-212ENST00000488896 PUM1Q14671 1186 aaKnown RBP eCLIP7.01□□□□□ -1.29
PTPN4-212ENST00000488896 TBR1Q16650 682 aa7.01□□□□□ -1.29
PTPN4-212ENST00000488896 DBX2Q6ZNG2 339 aa7.01□□□□□ -1.29
PTPN4-212ENST00000488896 JAZF1Q86VZ6 243 aa7.01□□□□□ -1.29
PTPN4-212ENST00000488896 SYNPOQ8N3V7 929 aa7.01□□□□□ -1.29
PTPN4-212ENST00000488896 TTC9BQ8N6N2 239 aa7.01□□□□□ -1.29
PTPN4-212ENST00000488896 DPYSL5Q9BPU6 564 aa7.01□□□□□ -1.29
PTPN4-212ENST00000488896 ACSS2Q9NR19 701 aa7.01□□□□□ -1.29
PTPN4-212ENST00000488896 B4GALT6Q9UBX8 382 aa7.01□□□□□ -1.29
PTPN4-212ENST00000488896 RGS3P49796 1198 aa7□□□□□ -1.29
PTPN4-212ENST00000488896 MRE11P49959 708 aa7□□□□□ -1.29
PTPN4-212ENST00000488896 ALDH6A1Q02252 535 aaKnown RBP7□□□□□ -1.29
PTPN4-212ENST00000488896 EIF4HQ15056 248 aaKnown RBP7□□□□□ -1.29
PTPN4-212ENST00000488896 LCE5AQ5TCM9 118 aa7□□□□□ -1.29
PTPN4-212ENST00000488896 TCTN3Q6NUS6 607 aa7□□□□□ -1.29
PTPN4-212ENST00000488896 PALM2Q8IXS6 379 aa7□□□□□ -1.29
PTPN4-212ENST00000488896 NXPE1Q8N323 547 aa7□□□□□ -1.29
PTPN4-212ENST00000488896 OR14K1Q8NGZ2 314 aa7□□□□□ -1.29
PTPN4-212ENST00000488896 KRTAP3-1Q9BYR8 98 aa7□□□□□ -1.29
PTPN4-212ENST00000488896 H2AFY2Q9P0M6 372 aaPredicted RBP7□□□□□ -1.29
PTPN4-212ENST00000488896 ZKSCAN5Q9Y2L8 839 aa7□□□□□ -1.29
PTPN4-212ENST00000488896 FOXS1O43638 330 aa6.99□□□□□ -1.29
PTPN4-212ENST00000488896 CDC14BO60729 498 aa6.99□□□□□ -1.29
PTPN4-212ENST00000488896 ZXDCQ2QGD7 858 aaPredicted RBP6.99□□□□□ -1.29
PTPN4-212ENST00000488896 PRAMEF9Q5VWM5 478 aa6.99□□□□□ -1.29
PTPN4-212ENST00000488896 TMEM200BQ69YZ2 307 aa6.99□□□□□ -1.29
PTPN4-212ENST00000488896 LRRTM3Q86VH5 581 aa6.99□□□□□ -1.29
PTPN4-212ENST00000488896 DVL3Q92997 716 aaPredicted RBP6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms