RNA–Protein interactions for RNA: ENST00000488427.1

ITGB1-214, Transcript of integrin subunit beta 1, humanhuman

TSL 1 (best)

Gene ITGB1, Length 861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-214ENST00000488427 ASB15Q8WXK1 588 aa6.1□□□□□ -1.43
ITGB1-214ENST00000488427 USP7Q93009 1102 aa6.1□□□□□ -1.43
ITGB1-214ENST00000488427 KCNC2Q96PR1 638 aa6.1□□□□□ -1.43
ITGB1-214ENST00000488427 FOXB1Q99853 325 aa6.1□□□□□ -1.43
ITGB1-214ENST00000488427 SLC39A2Q9NP94 309 aa6.1□□□□□ -1.43
ITGB1-214ENST00000488427 SPO11Q9Y5K1 396 aa6.1□□□□□ -1.43
ITGB1-214ENST00000488427 PDS5BQ9NTI5 1447 aa6.09□□□□□ -1.43
ITGB1-214ENST00000488427 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.09□□□□□ -1.43
ITGB1-214ENST00000488427 MROH6A6NGR9 719 aa6.09□□□□□ -1.43
ITGB1-214ENST00000488427 CD40P25942 277 aa6.09□□□□□ -1.43
ITGB1-214ENST00000488427 ECE1P42892 770 aa6.09□□□□□ -1.43
ITGB1-214ENST00000488427 DLX2Q07687 328 aaPredicted RBP6.09□□□□□ -1.43
ITGB1-214ENST00000488427 NFIXQ14938 502 aa6.09□□□□□ -1.43
ITGB1-214ENST00000488427 FRMD5Q7Z6J6 570 aa6.09□□□□□ -1.43
ITGB1-214ENST00000488427 ZNF761Q86XN6 746 aaPredicted RBP6.09□□□□□ -1.43
ITGB1-214ENST00000488427 STPG3Q8N7X2 389 aa6.09□□□□□ -1.43
ITGB1-214ENST00000488427 C7orf31Q8N865 590 aa6.09□□□□□ -1.43
ITGB1-214ENST00000488427 LEO1Q8WVC0 666 aaPredicted RBP6.09□□□□□ -1.43
ITGB1-214ENST00000488427 SPATA25Q9BR10 227 aa6.09□□□□□ -1.43
ITGB1-214ENST00000488427 KCND1Q9NSA2 647 aa6.09□□□□□ -1.43
ITGB1-214ENST00000488427 USP36Q9P275 1121 aaKnown RBP6.09□□□□□ -1.43
ITGB1-214ENST00000488427 UBA6A0AVT1 1052 aaPredicted RBP6.08□□□□□ -1.44
ITGB1-214ENST00000488427 GSG1L2A8MUP6 293 aa6.08□□□□□ -1.44
ITGB1-214ENST00000488427 GOLGA6L22H0YM25 854 aa6.08□□□□□ -1.44
ITGB1-214ENST00000488427 ZEB2O60315 1214 aa6.08□□□□□ -1.44
ITGB1-214ENST00000488427 BRINP1O60477 761 aa6.08□□□□□ -1.44
ITGB1-214ENST00000488427 TRIM13O60858 407 aa6.08□□□□□ -1.44
ITGB1-214ENST00000488427 MAFO75444 373 aaPredicted RBP6.08□□□□□ -1.44
ITGB1-214ENST00000488427 KNG1P01042 644 aa6.08□□□□□ -1.44
ITGB1-214ENST00000488427 ZBTB48P10074 688 aaPredicted RBP6.08□□□□□ -1.44
ITGB1-214ENST00000488427 APEX1P27695 318 aaKnown RBP6.08□□□□□ -1.44
ITGB1-214ENST00000488427 STAT3P40763 770 aa6.08□□□□□ -1.44
ITGB1-214ENST00000488427 LSSP48449 732 aa6.08□□□□□ -1.44
ITGB1-214ENST00000488427 VMACQ2NL98 169 aa6.08□□□□□ -1.44
ITGB1-214ENST00000488427 TTC38Q5R3I4 469 aa6.08□□□□□ -1.44
ITGB1-214ENST00000488427 NT5DC1Q5TFE4 455 aa6.08□□□□□ -1.44
ITGB1-214ENST00000488427 MCTP2Q6DN12 878 aa6.08□□□□□ -1.44
ITGB1-214ENST00000488427 DBX2Q6ZNG2 339 aa6.08□□□□□ -1.44
ITGB1-214ENST00000488427 TXNDC5Q8NBS9 432 aaKnown RBP6.08□□□□□ -1.44
ITGB1-214ENST00000488427 RPGRQ92834 1020 aaKnown RBP6.08□□□□□ -1.44
ITGB1-214ENST00000488427 YTHDC1Q96MU7 727 aaKnown RBP6.08□□□□□ -1.44
ITGB1-214ENST00000488427 TTC1Q99614 292 aa6.08□□□□□ -1.44
ITGB1-214ENST00000488427 OR10A5Q9H207 317 aa6.08□□□□□ -1.44
ITGB1-214ENST00000488427 TOMM22Q9NS69 142 aa6.08□□□□□ -1.44
ITGB1-214ENST00000488427 OXSMQ9NWU1 459 aa6.08□□□□□ -1.44
ITGB1-214ENST00000488427 BTBD7Q9P203 1132 aa6.08□□□□□ -1.44
ITGB1-214ENST00000488427 PRAMEF22A3QJZ6 481 aa6.07□□□□□ -1.44
ITGB1-214ENST00000488427 RAB11FIP3O75154 756 aa6.07□□□□□ -1.44
ITGB1-214ENST00000488427 POLD1P28340 1107 aa6.07□□□□□ -1.44
ITGB1-214ENST00000488427 CNGA1P29973 690 aa6.07□□□□□ -1.44
ITGB1-214ENST00000488427 DSG1Q02413 1049 aa6.07□□□□□ -1.44
ITGB1-214ENST00000488427 FAPQ12884 760 aa6.07□□□□□ -1.44
ITGB1-214ENST00000488427 NFATC3Q12968 1075 aa6.07□□□□□ -1.44
ITGB1-214ENST00000488427 CATSPEREQ5SY80 951 aa6.07□□□□□ -1.44
ITGB1-214ENST00000488427 GPR158Q5T848 1215 aa6.07□□□□□ -1.44
ITGB1-214ENST00000488427 EGFLAMQ63HQ2 1017 aa6.07□□□□□ -1.44
ITGB1-214ENST00000488427 OTOP2Q7RTS6 562 aa6.07□□□□□ -1.44
ITGB1-214ENST00000488427 PHYKPLQ8IUZ5 450 aa6.07□□□□□ -1.44
ITGB1-214ENST00000488427 TP53I13Q8NBR0 393 aaPredicted RBP6.07□□□□□ -1.44
ITGB1-214ENST00000488427 ERCC4Q92889 916 aaPredicted RBP6.07□□□□□ -1.44
ITGB1-214ENST00000488427 TEPSINQ96N21 525 aa6.07□□□□□ -1.44
ITGB1-214ENST00000488427 TACO1Q9BSH4 297 aaKnown RBP6.07□□□□□ -1.44
ITGB1-214ENST00000488427 IFT22Q9H7X7 185 aa6.07□□□□□ -1.44
ITGB1-214ENST00000488427 THG1LQ9NWX6 298 aaKnown RBP6.07□□□□□ -1.44
ITGB1-214ENST00000488427 UCKL1Q9NWZ5 548 aa6.07□□□□□ -1.44
ITGB1-214ENST00000488427 RBPJLQ9UBG7 517 aa6.07□□□□□ -1.44
ITGB1-214ENST00000488427 KCNG1Q9UIX4 513 aa6.07□□□□□ -1.44
ITGB1-214ENST00000488427 SYNPO2Q9UMS6 1093 aa6.07□□□□□ -1.44
ITGB1-214ENST00000488427 APOBEC2Q9Y235 224 aaKnown RBP6.07□□□□□ -1.44
ITGB1-214ENST00000488427 A0A087X0B3 334 aa6.06□□□□□ -1.44
ITGB1-214ENST00000488427 A0A1B0GTL3 188 aa6.06□□□□□ -1.44
ITGB1-214ENST00000488427 ATP2A2P16615 1042 aaKnown RBP6.06□□□□□ -1.44
ITGB1-214ENST00000488427 LSP1P33241 339 aa6.06□□□□□ -1.44
ITGB1-214ENST00000488427 MASP1P48740 699 aa6.06□□□□□ -1.44
ITGB1-214ENST00000488427 MLLT6P55198 1093 aaPredicted RBP6.06□□□□□ -1.44
ITGB1-214ENST00000488427 BCAR1P56945 870 aa6.06□□□□□ -1.44
ITGB1-214ENST00000488427 SESN2P58004 480 aaPredicted RBP6.06□□□□□ -1.44
ITGB1-214ENST00000488427 ALDH6A1Q02252 535 aaKnown RBP6.06□□□□□ -1.44
ITGB1-214ENST00000488427 LRRC32Q14392 662 aa6.06□□□□□ -1.44
ITGB1-214ENST00000488427 SEC23AQ15436 765 aa6.06□□□□□ -1.44
ITGB1-214ENST00000488427 STILQ15468 1287 aa6.06□□□□□ -1.44
ITGB1-214ENST00000488427 ZMAT1Q5H9K5 638 aa6.06□□□□□ -1.44
ITGB1-214ENST00000488427 Q6ZUG5 572 aa6.06□□□□□ -1.44
ITGB1-214ENST00000488427 RALYLQ86SE5 291 aaKnown RBP6.06□□□□□ -1.44
ITGB1-214ENST00000488427 SMC1BQ8NDV3 1235 aa6.06□□□□□ -1.44
ITGB1-214ENST00000488427 ZCCHC14Q8WYQ9 949 aaKnown RBP6.06□□□□□ -1.44
ITGB1-214ENST00000488427 CARD11Q9BXL7 1154 aa6.06□□□□□ -1.44
ITGB1-214ENST00000488427 MTFR1LQ9H019 292 aa6.06□□□□□ -1.44
ITGB1-214ENST00000488427 SPC25Q9HBM1 224 aa6.06□□□□□ -1.44
ITGB1-214ENST00000488427 RTEL1Q9NZ71 1219 aa6.06□□□□□ -1.44
ITGB1-214ENST00000488427 HMGXB3Q12766 1538 aa6.05□□□□□ -1.44
ITGB1-214ENST00000488427 ST20-MTHFSA0A0A6YYL1 179 aa6.05□□□□□ -1.44
ITGB1-214ENST00000488427 NOBOXO60393 691 aa6.05□□□□□ -1.44
ITGB1-214ENST00000488427 DNAJC6O75061 913 aa6.05□□□□□ -1.44
ITGB1-214ENST00000488427 ULK1O75385 1050 aa6.05□□□□□ -1.44
ITGB1-214ENST00000488427 ETV4P43268 484 aa6.05□□□□□ -1.44
ITGB1-214ENST00000488427 MEOX1P50221 254 aa6.05□□□□□ -1.44
ITGB1-214ENST00000488427 USP10Q14694 798 aaKnown RBP6.05□□□□□ -1.44
ITGB1-214ENST00000488427 UBXN11Q5T124 520 aa6.05□□□□□ -1.44
ITGB1-214ENST00000488427 GRAMD4Q6IC98 578 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms