RNA–Protein interactions for RNA: ENST00000488035.5

R3HDM1-219, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-219ENST00000488035 ZG16BQ96DA0 208 aa4.12□□□□□ -1.75
R3HDM1-219ENST00000488035 GNRHR2Q96P88 292 aa4.12□□□□□ -1.75
R3HDM1-219ENST00000488035 CRAMP1Q96RY5 1269 aa4.12□□□□□ -1.75
R3HDM1-219ENST00000488035 ALG1Q9BT22 464 aa4.12□□□□□ -1.75
R3HDM1-219ENST00000488035 INTS7Q9NVH2 962 aaKnown RBP4.12□□□□□ -1.75
R3HDM1-219ENST00000488035 SAMD15Q9P1V8 674 aa4.12□□□□□ -1.75
R3HDM1-219ENST00000488035 H7BY64 318 aa4.11□□□□□ -1.75
R3HDM1-219ENST00000488035 M0R2C6 588 aa4.11□□□□□ -1.75
R3HDM1-219ENST00000488035 KCNK3O14649 394 aa4.11□□□□□ -1.75
R3HDM1-219ENST00000488035 DNAJC6O75061 913 aa4.11□□□□□ -1.75
R3HDM1-219ENST00000488035 AMY2AP04746 511 aa4.11□□□□□ -1.75
R3HDM1-219ENST00000488035 AMY2BP19961 511 aa4.11□□□□□ -1.75
R3HDM1-219ENST00000488035 CANXP27824 592 aaKnown RBP4.11□□□□□ -1.75
R3HDM1-219ENST00000488035 DNM2P50570 870 aa4.11□□□□□ -1.75
R3HDM1-219ENST00000488035 AMPD3Q01432 767 aa4.11□□□□□ -1.75
R3HDM1-219ENST00000488035 HABP4Q5JVS0 413 aaKnown RBP4.11□□□□□ -1.75
R3HDM1-219ENST00000488035 CDCA2Q69YH5 1023 aaPredicted RBP4.11□□□□□ -1.75
R3HDM1-219ENST00000488035 IGFL4Q6B9Z1 124 aa4.11□□□□□ -1.75
R3HDM1-219ENST00000488035 OVCH1Q7RTY7 1134 aa4.11□□□□□ -1.75
R3HDM1-219ENST00000488035 RBM12BQ8IXT5 1001 aaKnown RBP4.11□□□□□ -1.75
R3HDM1-219ENST00000488035 PIP4K2CQ8TBX8 421 aa4.11□□□□□ -1.75
R3HDM1-219ENST00000488035 SH3RF2Q8TEC5 729 aa4.11□□□□□ -1.75
R3HDM1-219ENST00000488035 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.11□□□□□ -1.75
R3HDM1-219ENST00000488035 EXTL1Q92935 676 aa4.11□□□□□ -1.75
R3HDM1-219ENST00000488035 LRRC37BQ96QE4 947 aa4.11□□□□□ -1.75
R3HDM1-219ENST00000488035 SPC25Q9HBM1 224 aa4.11□□□□□ -1.75
R3HDM1-219ENST00000488035 SMURF1Q9HCE7 757 aa4.11□□□□□ -1.75
R3HDM1-219ENST00000488035 PRKAB1Q9Y478 270 aa4.11□□□□□ -1.75
R3HDM1-219ENST00000488035 PCDHB4Q9Y5E5 795 aa4.11□□□□□ -1.75
R3HDM1-219ENST00000488035 TCRBV5S2A0A599 114 aa4.1□□□□□ -1.75
R3HDM1-219ENST00000488035 ZNF891A8MT65 544 aaPredicted RBP4.1□□□□□ -1.75
R3HDM1-219ENST00000488035 FAM47E-STBD1D6RA91 191 aa4.1□□□□□ -1.75
R3HDM1-219ENST00000488035 TRAF5O00463 557 aa4.1□□□□□ -1.75
R3HDM1-219ENST00000488035 LTFP02788 710 aa4.1□□□□□ -1.75
R3HDM1-219ENST00000488035 PDE6AP16499 860 aa4.1□□□□□ -1.75
R3HDM1-219ENST00000488035 POU3F2P20265 443 aaPredicted RBP4.1□□□□□ -1.75
R3HDM1-219ENST00000488035 MECP2P51608 486 aaKnown RBP4.1□□□□□ -1.75
R3HDM1-219ENST00000488035 NEK4P51957 841 aa4.1□□□□□ -1.75
R3HDM1-219ENST00000488035 JAM2P57087 298 aa4.1□□□□□ -1.75
R3HDM1-219ENST00000488035 ZNF568Q3ZCX4 644 aa4.1□□□□□ -1.75
R3HDM1-219ENST00000488035 CFAP100Q494V2 611 aa4.1□□□□□ -1.75
R3HDM1-219ENST00000488035 TMEM177Q53S58 311 aa4.1□□□□□ -1.75
R3HDM1-219ENST00000488035 RNF187Q5TA31 235 aaPredicted RBP4.1□□□□□ -1.75
R3HDM1-219ENST00000488035 AGBL4Q5VU57 503 aa4.1□□□□□ -1.75
R3HDM1-219ENST00000488035 STEAP3Q658P3 488 aa4.1□□□□□ -1.75
R3HDM1-219ENST00000488035 OTOP3Q7RTS5 596 aa4.1□□□□□ -1.75
R3HDM1-219ENST00000488035 TAX1BP1Q86VP1 789 aa4.1□□□□□ -1.75
R3HDM1-219ENST00000488035 OSTM1Q86WC4 334 aa4.1□□□□□ -1.75
R3HDM1-219ENST00000488035 NXPE1Q8N323 547 aa4.1□□□□□ -1.75
R3HDM1-219ENST00000488035 ARRDC4Q8NCT1 418 aa4.1□□□□□ -1.75
R3HDM1-219ENST00000488035 NUDT10Q8NFP7 164 aa4.1□□□□□ -1.75
R3HDM1-219ENST00000488035 LEO1Q8WVC0 666 aaPredicted RBP4.1□□□□□ -1.75
R3HDM1-219ENST00000488035 NEU4Q8WWR8 484 aaPredicted RBP4.1□□□□□ -1.75
R3HDM1-219ENST00000488035 FBXW5Q969U6 566 aa4.1□□□□□ -1.75
R3HDM1-219ENST00000488035 NUDT11Q96G61 164 aa4.1□□□□□ -1.75
R3HDM1-219ENST00000488035 AJUBAQ96IF1 538 aa4.1□□□□□ -1.75
R3HDM1-219ENST00000488035 CELF4Q9BZC1 486 aaKnown RBP4.1□□□□□ -1.75
R3HDM1-219ENST00000488035 EPB41L1Q9H4G0 881 aa4.1□□□□□ -1.75
R3HDM1-219ENST00000488035 DLL4Q9NR61 685 aa4.1□□□□□ -1.75
R3HDM1-219ENST00000488035 HSPBP1Q9NZL4 362 aa4.1□□□□□ -1.75
R3HDM1-219ENST00000488035 TELO2Q9Y4R8 837 aa4.1□□□□□ -1.75
R3HDM1-219ENST00000488035 COL4A3BPQ9Y5P4 624 aa4.1□□□□□ -1.75
R3HDM1-219ENST00000488035 ZNF561-AS1K7EIQ3 104 aa4.09□□□□□ -1.75
R3HDM1-219ENST00000488035 CBX4O00257 560 aa4.09□□□□□ -1.75
R3HDM1-219ENST00000488035 MAFKO60675 156 aa4.09□□□□□ -1.75
R3HDM1-219ENST00000488035 KLHL18O94889 574 aa4.09□□□□□ -1.75
R3HDM1-219ENST00000488035 LRG1P02750 347 aa4.09□□□□□ -1.75
R3HDM1-219ENST00000488035 ADH4P08319 380 aa4.09□□□□□ -1.75
R3HDM1-219ENST00000488035 GNAT1P11488 350 aa4.09□□□□□ -1.75
R3HDM1-219ENST00000488035 KRT15P19012 456 aa4.09□□□□□ -1.75
R3HDM1-219ENST00000488035 SMAD2Q15796 467 aaKnown RBP4.09□□□□□ -1.75
R3HDM1-219ENST00000488035 PTPROQ16827 1216 aa4.09□□□□□ -1.75
R3HDM1-219ENST00000488035 EMC4Q5J8M3 183 aa4.09□□□□□ -1.75
R3HDM1-219ENST00000488035 CREB3L3Q68CJ9 461 aa4.09□□□□□ -1.75
R3HDM1-219ENST00000488035 LHFPL2Q6ZUX7 228 aa4.09□□□□□ -1.75
R3HDM1-219ENST00000488035 C16orf59Q7L2K0 433 aa4.09□□□□□ -1.75
R3HDM1-219ENST00000488035 KRT26Q7Z3Y9 468 aa4.09□□□□□ -1.75
R3HDM1-219ENST00000488035 PTRH1Q86Y79 214 aaKnown RBP4.09□□□□□ -1.75
R3HDM1-219ENST00000488035 C1orf210Q8IVY1 113 aa4.09□□□□□ -1.75
R3HDM1-219ENST00000488035 REXO1L1PQ8IX06 675 aa4.09□□□□□ -1.75
R3HDM1-219ENST00000488035 AFAP1L2Q8N4X5 818 aa4.09□□□□□ -1.75
R3HDM1-219ENST00000488035 PHOSPHO1Q8TCT1 267 aa4.09□□□□□ -1.75
R3HDM1-219ENST00000488035 CHAC2Q8WUX2 184 aa4.09□□□□□ -1.75
R3HDM1-219ENST00000488035 FAM89AQ96GI7 184 aa4.09□□□□□ -1.75
R3HDM1-219ENST00000488035 CD244Q9BZW8 370 aa4.09□□□□□ -1.75
R3HDM1-219ENST00000488035 PCDH12Q9NPG4 1184 aa4.09□□□□□ -1.75
R3HDM1-219ENST00000488035 CATSPERZQ9NTU4 200 aa4.09□□□□□ -1.75
R3HDM1-219ENST00000488035 MAPRE3Q9UPY8 281 aa4.09□□□□□ -1.75
R3HDM1-219ENST00000488035 MAN2B1O00754 1011 aa4.08□□□□□ -1.76
R3HDM1-219ENST00000488035 SLC27A2O14975 620 aa4.08□□□□□ -1.76
R3HDM1-219ENST00000488035 TADA3O75528 432 aa4.08□□□□□ -1.76
R3HDM1-219ENST00000488035 DGKIO75912 1065 aa4.08□□□□□ -1.76
R3HDM1-219ENST00000488035 FBXO21O94952 628 aa4.08□□□□□ -1.76
R3HDM1-219ENST00000488035 COL6A1P12109 1028 aa4.08□□□□□ -1.76
R3HDM1-219ENST00000488035 NAT1P18440 290 aa4.08□□□□□ -1.76
R3HDM1-219ENST00000488035 ACO1P21399 889 aaKnown RBP4.08□□□□□ -1.76
R3HDM1-219ENST00000488035 ID4P47928 161 aa4.08□□□□□ -1.76
R3HDM1-219ENST00000488035 CDKN1CP49918 316 aaPredicted RBP4.08□□□□□ -1.76
R3HDM1-219ENST00000488035 ST5P78524 1137 aa4.08□□□□□ -1.76
R3HDM1-219ENST00000488035 SEC23AQ15436 765 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms