RNA–Protein interactions for RNA: ENST00000487029.1

SNRNP27-204, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 3

Gene SNRNP27, Length 604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-204ENST00000487029 MRPS23Q9Y3D9 190 aaKnown RBP5.11□□□□□ -1.59
SNRNP27-204ENST00000487029 NKRFO15226 690 aaKnown RBP eCLIP5.1□□□□□ -1.59
SNRNP27-204ENST00000487029 ADH4P08319 380 aa5.1□□□□□ -1.59
SNRNP27-204ENST00000487029 POLD1P28340 1107 aa5.1□□□□□ -1.59
SNRNP27-204ENST00000487029 SUMO1P63165 101 aaKnown RBP5.1□□□□□ -1.59
SNRNP27-204ENST00000487029 TKFCQ3LXA3 575 aa5.1□□□□□ -1.59
SNRNP27-204ENST00000487029 DPY19L2P1Q6NXN4 242 aa5.1□□□□□ -1.59
SNRNP27-204ENST00000487029 MRGPRGQ86SM5 289 aa5.1□□□□□ -1.59
SNRNP27-204ENST00000487029 ZNF483Q8TF39 744 aaPredicted RBP5.1□□□□□ -1.59
SNRNP27-204ENST00000487029 CFHR4Q92496 578 aa5.1□□□□□ -1.59
SNRNP27-204ENST00000487029 OSBP2Q969R2 916 aa5.1□□□□□ -1.59
SNRNP27-204ENST00000487029 FAM89AQ96GI7 184 aa5.1□□□□□ -1.59
SNRNP27-204ENST00000487029 IER2Q9BTL4 223 aa5.1□□□□□ -1.59
SNRNP27-204ENST00000487029 PDGFDQ9GZP0 370 aaPredicted RBP5.1□□□□□ -1.59
SNRNP27-204ENST00000487029 CEP72Q9P209 647 aa5.1□□□□□ -1.59
SNRNP27-204ENST00000487029 PPP1R12AO14974 1030 aaPredicted RBP5.09□□□□□ -1.59
SNRNP27-204ENST00000487029 HIBADHP31937 336 aaKnown RBP5.09□□□□□ -1.59
SNRNP27-204ENST00000487029 IL12RB1P42701 662 aa5.09□□□□□ -1.59
SNRNP27-204ENST00000487029 MAP4K2Q12851 820 aa5.09□□□□□ -1.59
SNRNP27-204ENST00000487029 ZNF568Q3ZCX4 644 aa5.09□□□□□ -1.59
SNRNP27-204ENST00000487029 UHMK1Q8TAS1 419 aaKnown RBP5.09□□□□□ -1.59
SNRNP27-204ENST00000487029 KCTD13Q8WZ19 329 aa5.09□□□□□ -1.59
SNRNP27-204ENST00000487029 VOPP1Q96AW1 172 aa5.09□□□□□ -1.59
SNRNP27-204ENST00000487029 CLIP3Q96DZ5 547 aa5.09□□□□□ -1.59
SNRNP27-204ENST00000487029 TMX1Q9H3N1 280 aa5.09□□□□□ -1.59
SNRNP27-204ENST00000487029 NCOA5Q9HCD5 579 aaKnown RBP5.09□□□□□ -1.59
SNRNP27-204ENST00000487029 SLC39A2Q9NP94 309 aa5.09□□□□□ -1.59
SNRNP27-204ENST00000487029 SLC2A4RGQ9NR83 387 aa5.09□□□□□ -1.59
SNRNP27-204ENST00000487029 TLR9Q9NR96 1032 aa5.09□□□□□ -1.59
SNRNP27-204ENST00000487029 NR2E1Q9Y466 385 aa5.09□□□□□ -1.59
SNRNP27-204ENST00000487029 CD2APQ9Y5K6 639 aa5.09□□□□□ -1.59
SNRNP27-204ENST00000487029 PLD2O14939 933 aa5.08□□□□□ -1.6
SNRNP27-204ENST00000487029 DLX3O60479 287 aa5.08□□□□□ -1.6
SNRNP27-204ENST00000487029 PPFIA2O75334 1257 aa5.08□□□□□ -1.6
SNRNP27-204ENST00000487029 MSX2P35548 267 aaPredicted RBP5.08□□□□□ -1.6
SNRNP27-204ENST00000487029 GYS2P54840 703 aa5.08□□□□□ -1.6
SNRNP27-204ENST00000487029 RNF187Q5TA31 235 aaPredicted RBP5.08□□□□□ -1.6
SNRNP27-204ENST00000487029 MRPL4Q9BYD3 311 aaKnown RBP5.08□□□□□ -1.6
SNRNP27-204ENST00000487029 C12orf65Q9H3J6 166 aaKnown RBP5.08□□□□□ -1.6
SNRNP27-204ENST00000487029 ZNF703Q9H7S9 590 aaPredicted RBP5.08□□□□□ -1.6
SNRNP27-204ENST00000487029 PLAAQ9Y263 795 aa5.08□□□□□ -1.6
SNRNP27-204ENST00000487029 PRKAB1Q9Y478 270 aa5.08□□□□□ -1.6
SNRNP27-204ENST00000487029 RFPL3O75679 317 aa5.07□□□□□ -1.6
SNRNP27-204ENST00000487029 MAKP20794 623 aa5.07□□□□□ -1.6
SNRNP27-204ENST00000487029 GJA4P35212 333 aa5.07□□□□□ -1.6
SNRNP27-204ENST00000487029 FNDC3BQ53EP0 1204 aaKnown RBP5.07□□□□□ -1.6
SNRNP27-204ENST00000487029 DALRD3Q5D0E6 543 aaKnown RBP5.07□□□□□ -1.6
SNRNP27-204ENST00000487029 HABP4Q5JVS0 413 aaKnown RBP5.07□□□□□ -1.6
SNRNP27-204ENST00000487029 LARP4Q71RC2 724 aaKnown RBP eCLIP5.07□□□□□ -1.6
SNRNP27-204ENST00000487029 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.07□□□□□ -1.6
SNRNP27-204ENST00000487029 NINJ1Q92982 152 aa5.07□□□□□ -1.6
SNRNP27-204ENST00000487029 PUS7Q96PZ0 661 aaKnown RBP5.07□□□□□ -1.6
SNRNP27-204ENST00000487029 KCNJ15Q99712 375 aa5.07□□□□□ -1.6
SNRNP27-204ENST00000487029 KIAA1683Q9H0B3 1180 aa5.07□□□□□ -1.6
SNRNP27-204ENST00000487029 GPR27Q9NS67 375 aa5.07□□□□□ -1.6
SNRNP27-204ENST00000487029 CUTAO60888 179 aa5.06□□□□□ -1.6
SNRNP27-204ENST00000487029 RAPGEF3O95398 923 aa5.06□□□□□ -1.6
SNRNP27-204ENST00000487029 PDE6AP16499 860 aa5.06□□□□□ -1.6
SNRNP27-204ENST00000487029 EPHA5P54756 1037 aa5.06□□□□□ -1.6
SNRNP27-204ENST00000487029 GABREP78334 506 aa5.06□□□□□ -1.6
SNRNP27-204ENST00000487029 PABPC4Q13310 644 aaKnown RBP eCLIP5.06□□□□□ -1.62e-6■■□□□ 11.4
SNRNP27-204ENST00000487029 NFYCQ13952 458 aa5.06□□□□□ -1.6
SNRNP27-204ENST00000487029 GPR135Q8IZ08 494 aa5.06□□□□□ -1.6
SNRNP27-204ENST00000487029 TTPALQ9BTX7 342 aa5.06□□□□□ -1.6
SNRNP27-204ENST00000487029 PHF20Q9BVI0 1012 aa5.06□□□□□ -1.6
SNRNP27-204ENST00000487029 SPC25Q9HBM1 224 aa5.06□□□□□ -1.6
SNRNP27-204ENST00000487029 PLA2G3Q9NZ20 509 aa5.06□□□□□ -1.6
SNRNP27-204ENST00000487029 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.05□□□□□ -1.6
SNRNP27-204ENST00000487029 BLACEA4D250 179 aa5.05□□□□□ -1.6
SNRNP27-204ENST00000487029 ARHGAP6O43182 974 aa5.05□□□□□ -1.6
SNRNP27-204ENST00000487029 RAMP2O60895 175 aa5.05□□□□□ -1.6
SNRNP27-204ENST00000487029 DNAJC6O75061 913 aa5.05□□□□□ -1.6
SNRNP27-204ENST00000487029 EFCAB14O75071 495 aa5.05□□□□□ -1.6
SNRNP27-204ENST00000487029 C6orf222P0C671 652 aaPredicted RBP5.05□□□□□ -1.6
SNRNP27-204ENST00000487029 ETV4P43268 484 aa5.05□□□□□ -1.6
SNRNP27-204ENST00000487029 NTRK3Q16288 839 aa5.05□□□□□ -1.6
SNRNP27-204ENST00000487029 C21orf62-AS1Q17RA5 79 aa5.05□□□□□ -1.6
SNRNP27-204ENST00000487029 TRIM61Q5EBN2 209 aa5.05□□□□□ -1.6
SNRNP27-204ENST00000487029 ZMAT1Q5H9K5 638 aa5.05□□□□□ -1.6
SNRNP27-204ENST00000487029 SPTY2D1Q68D10 685 aaPredicted RBP5.05□□□□□ -1.6
SNRNP27-204ENST00000487029 FILIP1Q7Z7B0 1213 aa5.05□□□□□ -1.6
SNRNP27-204ENST00000487029 NIM1KQ8IY84 436 aa5.05□□□□□ -1.6
SNRNP27-204ENST00000487029 ULK2Q8IYT8 1036 aa5.05□□□□□ -1.6
SNRNP27-204ENST00000487029 MFSD3Q96ES6 412 aa5.05□□□□□ -1.6
SNRNP27-204ENST00000487029 SFMBT1Q9UHJ3 866 aa5.05□□□□□ -1.6
SNRNP27-204ENST00000487029 DSEQ9UL01 958 aa5.05□□□□□ -1.6
SNRNP27-204ENST00000487029 REXO2Q9Y3B8 237 aaKnown RBP5.05□□□□□ -1.6
SNRNP27-204ENST00000487029 KCNQ2O43526 872 aa5.04□□□□□ -1.6
SNRNP27-204ENST00000487029 LMO1P25800 156 aa5.04□□□□□ -1.6
SNRNP27-204ENST00000487029 RPS19P39019 145 aaKnown RBP5.04□□□□□ -1.6
SNRNP27-204ENST00000487029 MASP1P48740 699 aa5.04□□□□□ -1.6
SNRNP27-204ENST00000487029 DBPQ10586 325 aaPredicted RBP5.04□□□□□ -1.6
SNRNP27-204ENST00000487029 KCNT2Q6UVM3 1135 aa5.04□□□□□ -1.6
SNRNP27-204ENST00000487029 USP53Q70EK8 1073 aa5.04□□□□□ -1.6
SNRNP27-204ENST00000487029 KCTD1Q719H9 257 aa5.04□□□□□ -1.6
SNRNP27-204ENST00000487029 MAMDC2Q7Z304 686 aaPredicted RBP5.04□□□□□ -1.6
SNRNP27-204ENST00000487029 GSTCDQ8NEC7 633 aa5.04□□□□□ -1.6
SNRNP27-204ENST00000487029 SH3RF2Q8TEC5 729 aa5.04□□□□□ -1.6
SNRNP27-204ENST00000487029 DCAF4Q8WV16 495 aa5.04□□□□□ -1.6
SNRNP27-204ENST00000487029 PTPRN2Q92932 1015 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms