RNA–Protein interactions for RNA: ENST00000486901.1

HSPG2-211, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 3,586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-211ENST00000486901 PCDHGC5Q9Y5F6 944 aa13.48□□□□□ -0.25
HSPG2-211ENST00000486901 ALS2Q96Q42 1657 aa13.48□□□□□ -0.25
HSPG2-211ENST00000486901 LAD1O00515 517 aa13.48□□□□□ -0.25
HSPG2-211ENST00000486901 GNPATO15228 680 aa13.48□□□□□ -0.25
HSPG2-211ENST00000486901 GCNT3O95395 438 aa13.48□□□□□ -0.25
HSPG2-211ENST00000486901 ELF1P32519 619 aa13.48□□□□□ -0.25
HSPG2-211ENST00000486901 GALCP54803 685 aa13.48□□□□□ -0.25
HSPG2-211ENST00000486901 ITIH3Q06033 890 aa13.48□□□□□ -0.25
HSPG2-211ENST00000486901 AMIGO3Q86WK7 504 aa13.48□□□□□ -0.25
HSPG2-211ENST00000486901 LRRC34Q8IZ02 419 aa13.48□□□□□ -0.25
HSPG2-211ENST00000486901 TPCN2Q8NHX9 752 aa13.48□□□□□ -0.25
HSPG2-211ENST00000486901 GDAP1Q8TB36 358 aa13.48□□□□□ -0.25
HSPG2-211ENST00000486901 FBXO25Q8TCJ0 367 aa13.48□□□□□ -0.25
HSPG2-211ENST00000486901 KCNV2Q8TDN2 545 aa13.48□□□□□ -0.25
HSPG2-211ENST00000486901 C18orf8Q96DM3 657 aa13.48□□□□□ -0.25
HSPG2-211ENST00000486901 MRRFQ96E11 262 aaKnown RBP13.48□□□□□ -0.25
HSPG2-211ENST00000486901 TRIM33Q9UPN9 1127 aa13.48□□□□□ -0.25
HSPG2-211ENST00000486901 RASSF9O75901 435 aa13.48□□□□□ -0.25
HSPG2-211ENST00000486901 PLCG2P16885 1265 aa13.48□□□□□ -0.25
HSPG2-211ENST00000486901 SMTNP53814 917 aa13.48□□□□□ -0.25
HSPG2-211ENST00000486901 SLC29A2Q14542 456 aa13.48□□□□□ -0.25
HSPG2-211ENST00000486901 ZNF572Q7Z3I7 529 aaPredicted RBP13.48□□□□□ -0.25
HSPG2-211ENST00000486901 IRF2BP2Q7Z5L9 587 aa13.48□□□□□ -0.25
HSPG2-211ENST00000486901 TRIM59Q8IWR1 403 aa13.48□□□□□ -0.25
HSPG2-211ENST00000486901 CYP2W1Q8TAV3 490 aa13.48□□□□□ -0.25
HSPG2-211ENST00000486901 LRRC45Q96CN5 670 aa13.48□□□□□ -0.25
HSPG2-211ENST00000486901 BTBD6Q96KE9 485 aa13.48□□□□□ -0.25
HSPG2-211ENST00000486901 FAM118BQ9BPY3 351 aa13.48□□□□□ -0.25
HSPG2-211ENST00000486901 RAB34Q9BZG1 259 aa13.48□□□□□ -0.25
HSPG2-211ENST00000486901 PLCB1Q9NQ66 1216 aa13.48□□□□□ -0.25
HSPG2-211ENST00000486901 UTP11Q9Y3A2 253 aaKnown RBP13.48□□□□□ -0.25
HSPG2-211ENST00000486901 NUP98P52948 1817 aa13.47□□□□□ -0.25
HSPG2-211ENST00000486901 PVALEFA0A1B0GWK0 134 aa13.47□□□□□ -0.25
HSPG2-211ENST00000486901 BAG3O95817 575 aa13.47□□□□□ -0.25
HSPG2-211ENST00000486901 CYP2J2P51589 502 aa13.47□□□□□ -0.25
HSPG2-211ENST00000486901 USP11P51784 963 aa13.47□□□□□ -0.25
HSPG2-211ENST00000486901 GSCP56915 257 aaPredicted RBP13.47□□□□□ -0.25
HSPG2-211ENST00000486901 TMC3Q7Z5M5 1100 aa13.47□□□□□ -0.25
HSPG2-211ENST00000486901 ARFGAP2Q8N6H7 521 aa13.47□□□□□ -0.25
HSPG2-211ENST00000486901 DYDC1Q8WWB3 177 aa13.47□□□□□ -0.25
HSPG2-211ENST00000486901 SETDB2Q96T68 719 aa13.47□□□□□ -0.25
HSPG2-211ENST00000486901 FMO2Q99518 471 aa13.47□□□□□ -0.25
HSPG2-211ENST00000486901 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.47□□□□□ -0.256e-7■■□□□ 12.4
HSPG2-211ENST00000486901 SEMA4AQ9H3S1 761 aa13.47□□□□□ -0.25
HSPG2-211ENST00000486901 RGL1Q9NZL6 768 aa13.47□□□□□ -0.25
HSPG2-211ENST00000486901 TBK1Q9UHD2 729 aa13.47□□□□□ -0.25
HSPG2-211ENST00000486901 TSKSQ9UJT2 592 aa13.47□□□□□ -0.25
HSPG2-211ENST00000486901 ZNF652Q9Y2D9 606 aa13.47□□□□□ -0.25
HSPG2-211ENST00000486901 DDX3XO00571 662 aaKnown RBP eCLIP13.47□□□□□ -0.25
HSPG2-211ENST00000486901 H2AFZP0C0S5 128 aa13.47□□□□□ -0.25
HSPG2-211ENST00000486901 SCNN1DP51172 638 aa13.47□□□□□ -0.25
HSPG2-211ENST00000486901 NEDD9Q14511 834 aa13.47□□□□□ -0.25
HSPG2-211ENST00000486901 H2AFVQ71UI9 128 aa13.47□□□□□ -0.25
HSPG2-211ENST00000486901 CCDC65Q8IXS2 484 aa13.47□□□□□ -0.25
HSPG2-211ENST00000486901 ARHGEF26Q96DR7 871 aa13.47□□□□□ -0.25
HSPG2-211ENST00000486901 PSMD1Q99460 953 aa13.47□□□□□ -0.25
HSPG2-211ENST00000486901 GANQ9H2C0 597 aa13.47□□□□□ -0.25
HSPG2-211ENST00000486901 ABCF3Q9NUQ8 709 aa13.47□□□□□ -0.25
HSPG2-211ENST00000486901 EP400Q96L91 3159 aa13.47□□□□□ -0.25
HSPG2-211ENST00000486901 XRCC5P13010 732 aaKnown RBP13.47□□□□□ -0.25
HSPG2-211ENST00000486901 PON1P27169 355 aa13.47□□□□□ -0.25
HSPG2-211ENST00000486901 HOXA13P31271 388 aaPredicted RBP13.47□□□□□ -0.25
HSPG2-211ENST00000486901 SBK1Q52WX2 424 aa13.47□□□□□ -0.25
HSPG2-211ENST00000486901 PWWP2AQ96N64 755 aa13.47□□□□□ -0.25
HSPG2-211ENST00000486901 PKD2L1Q9P0L9 805 aa13.47□□□□□ -0.25
HSPG2-211ENST00000486901 TIAM2Q8IVF5 1701 aa13.47□□□□□ -0.25
HSPG2-211ENST00000486901 F8VZ95 297 aa13.46□□□□□ -0.25
HSPG2-211ENST00000486901 C6orf229H3BNL8 230 aa13.46□□□□□ -0.25
HSPG2-211ENST00000486901 CALCAP01258 141 aa13.46□□□□□ -0.25
HSPG2-211ENST00000486901 PCP11498 1178 aaKnown RBP13.46□□□□□ -0.25
HSPG2-211ENST00000486901 SNX1Q13596 522 aa13.46□□□□□ -0.25
HSPG2-211ENST00000486901 ADGRF4Q8IZF3 695 aa13.46□□□□□ -0.25
HSPG2-211ENST00000486901 LINC00116Q8NCU8 138 aa13.46□□□□□ -0.25
HSPG2-211ENST00000486901 STK17AQ9UEE5 414 aa13.46□□□□□ -0.25
HSPG2-211ENST00000486901 ACSL3O95573 720 aa13.46□□□□□ -0.25
HSPG2-211ENST00000486901 KCNJ2P63252 427 aa13.46□□□□□ -0.25
HSPG2-211ENST00000486901 TCP10Q12799 353 aa13.46□□□□□ -0.25
HSPG2-211ENST00000486901 C6orf89Q6UWU4 347 aa13.46□□□□□ -0.25
HSPG2-211ENST00000486901 SLC35G2Q8TBE7 412 aa13.46□□□□□ -0.25
HSPG2-211ENST00000486901 KCNK9Q9NPC2 374 aa13.46□□□□□ -0.25
HSPG2-211ENST00000486901 MYH3P11055 1940 aa13.46□□□□□ -0.26
HSPG2-211ENST00000486901 CYP11B2P19099 503 aa13.46□□□□□ -0.26
HSPG2-211ENST00000486901 NMT1P30419 496 aaKnown RBP13.46□□□□□ -0.26
HSPG2-211ENST00000486901 ZCWPW2Q504Y3 356 aa13.46□□□□□ -0.26
HSPG2-211ENST00000486901 ARSHQ5FYA8 562 aa13.46□□□□□ -0.26
HSPG2-211ENST00000486901 RUFY4Q6ZNE9 571 aa13.46□□□□□ -0.26
HSPG2-211ENST00000486901 DAGLBQ8NCG7 672 aa13.46□□□□□ -0.26
HSPG2-211ENST00000486901 SCFD2Q8WU76 684 aa13.46□□□□□ -0.26
HSPG2-211ENST00000486901 FAM84AQ96KN4 292 aa13.46□□□□□ -0.26
HSPG2-211ENST00000486901 PAIP2Q9BPZ3 127 aaKnown RBP13.46□□□□□ -0.26
HSPG2-211ENST00000486901 BHMT2Q9H2M3 363 aa13.46□□□□□ -0.26
HSPG2-211ENST00000486901 PSTPIP2Q9H939 334 aa13.46□□□□□ -0.26
HSPG2-211ENST00000486901 VEZTQ9HBM0 779 aa13.46□□□□□ -0.26
HSPG2-211ENST00000486901 TCRBV7S2A1N4TA0A589 114 aa13.45□□□□□ -0.26
HSPG2-211ENST00000486901 RBM5P52756 815 aaKnown RBP eCLIP13.45□□□□□ -0.26
HSPG2-211ENST00000486901 NSMFQ6X4W1 530 aa13.45□□□□□ -0.26
HSPG2-211ENST00000486901 KRT35Q92764 455 aa13.45□□□□□ -0.26
HSPG2-211ENST00000486901 SGSM3Q96HU1 749 aa13.45□□□□□ -0.26
HSPG2-211ENST00000486901 XPO6Q96QU8 1125 aaKnown RBP13.45□□□□□ -0.26
HSPG2-211ENST00000486901 REEP2Q9BRK0 252 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms