RNA–Protein interactions for RNA: ENST00000486711.1

SMC4-218, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-218ENST00000486711 CATSPERZQ9NTU4 200 aa6.44□□□□□ -1.38
SMC4-218ENST00000486711 NDOR1Q9UHB4 597 aa6.44□□□□□ -1.38
SMC4-218ENST00000486711 PTPN22Q9Y2R2 807 aa6.44□□□□□ -1.38
SMC4-218ENST00000486711 ATP23Q9Y6H3 246 aa6.44□□□□□ -1.38
SMC4-218ENST00000486711 HMGA2P52926 109 aa6.43□□□□□ -1.38
SMC4-218ENST00000486711 ANAPC15P60006 121 aa6.43□□□□□ -1.38
SMC4-218ENST00000486711 IGBP1P78318 339 aa6.43□□□□□ -1.38
SMC4-218ENST00000486711 PRKD1Q15139 912 aaPredicted RBP6.43□□□□□ -1.38
SMC4-218ENST00000486711 TAX1BP1Q86VP1 789 aa6.43□□□□□ -1.38
SMC4-218ENST00000486711 DHX37Q8IY37 1157 aaKnown RBP6.43□□□□□ -1.38
SMC4-218ENST00000486711 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.42□□□□□ -1.38
SMC4-218ENST00000486711 FAM90A27PA6NNH2 459 aa6.42□□□□□ -1.38
SMC4-218ENST00000486711 MAN2B1O00754 1011 aa6.42□□□□□ -1.38
SMC4-218ENST00000486711 GSTA4O15217 222 aa6.42□□□□□ -1.38
SMC4-218ENST00000486711 SUV39H1O43463 412 aa6.42□□□□□ -1.38
SMC4-218ENST00000486711 ETV4P43268 484 aa6.42□□□□□ -1.38
SMC4-218ENST00000486711 MASP1P48740 699 aa6.42□□□□□ -1.38
SMC4-218ENST00000486711 ST5P78524 1137 aa6.42□□□□□ -1.38
SMC4-218ENST00000486711 GUCY1A3Q02108 690 aa6.42□□□□□ -1.38
SMC4-218ENST00000486711 WDR72Q3MJ13 1102 aa6.42□□□□□ -1.38
SMC4-218ENST00000486711 C16orf59Q7L2K0 433 aa6.42□□□□□ -1.38
SMC4-218ENST00000486711 SCYL1Q96KG9 808 aa6.42□□□□□ -1.38
SMC4-218ENST00000486711 BRINP2Q9C0B6 783 aa6.42□□□□□ -1.38
SMC4-218ENST00000486711 FBXO10Q9UK96 956 aa6.42□□□□□ -1.38
SMC4-218ENST00000486711 COL4A3BPQ9Y5P4 624 aa6.42□□□□□ -1.38
SMC4-218ENST00000486711 ARVCFO00192 962 aa6.41□□□□□ -1.38
SMC4-218ENST00000486711 SLPIP03973 132 aa6.41□□□□□ -1.38
SMC4-218ENST00000486711 C6orf222P0C671 652 aaPredicted RBP6.41□□□□□ -1.38
SMC4-218ENST00000486711 PYGMP11217 842 aa6.41□□□□□ -1.38
SMC4-218ENST00000486711 MYCLP1P12525 358 aaPredicted RBP6.41□□□□□ -1.38
SMC4-218ENST00000486711 PDE6AP16499 860 aa6.41□□□□□ -1.38
SMC4-218ENST00000486711 COMTP21964 271 aa6.41□□□□□ -1.38
SMC4-218ENST00000486711 PTGS1P23219 599 aa6.41□□□□□ -1.38
SMC4-218ENST00000486711 CNGA1P29973 690 aa6.41□□□□□ -1.38
SMC4-218ENST00000486711 RRADP55042 308 aa6.41□□□□□ -1.38
SMC4-218ENST00000486711 CRY1Q16526 586 aa6.41□□□□□ -1.38
SMC4-218ENST00000486711 TM4SF20Q53R12 229 aa6.41□□□□□ -1.38
SMC4-218ENST00000486711 TRIM61Q5EBN2 209 aa6.41□□□□□ -1.38
SMC4-218ENST00000486711 FAM47CQ5HY64 1035 aa6.41□□□□□ -1.38
SMC4-218ENST00000486711 CXXC5Q7LFL8 322 aaKnown RBP6.41□□□□□ -1.38
SMC4-218ENST00000486711 PTRH1Q86Y79 214 aaKnown RBP6.41□□□□□ -1.38
SMC4-218ENST00000486711 PCDH19Q8TAB3 1148 aa6.41□□□□□ -1.38
SMC4-218ENST00000486711 ADOQ96SZ5 270 aa6.41□□□□□ -1.38
SMC4-218ENST00000486711 MRIQ9BWK5 157 aa6.41□□□□□ -1.38
SMC4-218ENST00000486711 MAGEC2Q9UBF1 373 aaPredicted RBP6.41□□□□□ -1.38
SMC4-218ENST00000486711 OAZ3Q9UMX2 235 aa6.41□□□□□ -1.38
SMC4-218ENST00000486711 NOP58Q9Y2X3 529 aaKnown RBP6.41□□□□□ -1.38
SMC4-218ENST00000486711 PCDHA8Q9Y5H6 950 aa6.41□□□□□ -1.38
SMC4-218ENST00000486711 PRAMEF25A6NGN4 478 aa6.4□□□□□ -1.38
SMC4-218ENST00000486711 AMY2AP04746 511 aa6.4□□□□□ -1.38
SMC4-218ENST00000486711 KRT15P19012 456 aa6.4□□□□□ -1.38
SMC4-218ENST00000486711 AMY2BP19961 511 aa6.4□□□□□ -1.38
SMC4-218ENST00000486711 AOAHP28039 575 aa6.4□□□□□ -1.38
SMC4-218ENST00000486711 SOX5P35711 763 aa6.4□□□□□ -1.38
SMC4-218ENST00000486711 RNF151Q2KHN1 245 aa6.4□□□□□ -1.38
SMC4-218ENST00000486711 CT47A1Q5JQC4 288 aaPredicted RBP6.4□□□□□ -1.38
SMC4-218ENST00000486711 OSTM1Q86WC4 334 aa6.4□□□□□ -1.38
SMC4-218ENST00000486711 ZFPM1Q8IX07 1006 aa6.4□□□□□ -1.38
SMC4-218ENST00000486711 FUKQ8N0W3 1084 aa6.4□□□□□ -1.38
SMC4-218ENST00000486711 CHAC2Q8WUX2 184 aa6.4□□□□□ -1.38
SMC4-218ENST00000486711 EDAQ92838 391 aa6.4□□□□□ -1.38
SMC4-218ENST00000486711 GPATCH3Q96I76 525 aa6.4□□□□□ -1.38
SMC4-218ENST00000486711 CLUHP3Q96NS8 147 aa6.4□□□□□ -1.38
SMC4-218ENST00000486711 SLC52A2Q9HAB3 445 aa6.4□□□□□ -1.38
SMC4-218ENST00000486711 INCENPQ9NQS7 918 aa6.4□□□□□ -1.38
SMC4-218ENST00000486711 INTS7Q9NVH2 962 aaKnown RBP6.4□□□□□ -1.38
SMC4-218ENST00000486711 GALNT8Q9NY28 637 aa6.4□□□□□ -1.38
SMC4-218ENST00000486711 CBLCQ9ULV8 474 aa6.4□□□□□ -1.38
SMC4-218ENST00000486711 KCNQ2O43526 872 aa6.39□□□□□ -1.39
SMC4-218ENST00000486711 CLASP2O75122 1294 aaKnown RBP6.39□□□□□ -1.39
SMC4-218ENST00000486711 RAD17O75943 681 aa6.39□□□□□ -1.39
SMC4-218ENST00000486711 CR2P20023 1033 aa6.39□□□□□ -1.39
SMC4-218ENST00000486711 FLT3P36888 993 aa6.39□□□□□ -1.39
SMC4-218ENST00000486711 HERVK_113P62684 666 aa6.39□□□□□ -1.39
SMC4-218ENST00000486711 IL13RA1P78552 427 aa6.39□□□□□ -1.39
SMC4-218ENST00000486711 CNNM4Q6P4Q7 775 aa6.39□□□□□ -1.39
SMC4-218ENST00000486711 KRT26Q7Z3Y9 468 aa6.39□□□□□ -1.39
SMC4-218ENST00000486711 BRAPQ7Z569 592 aa6.39□□□□□ -1.39
SMC4-218ENST00000486711 POLNQ7Z5Q5 900 aa6.39□□□□□ -1.39
SMC4-218ENST00000486711 MAGEB10Q96LZ2 347 aaPredicted RBP6.39□□□□□ -1.39
SMC4-218ENST00000486711 ZNF341Q9BYN7 854 aa6.39□□□□□ -1.39
SMC4-218ENST00000486711 ZDHHC5Q9C0B5 715 aa6.39□□□□□ -1.39
SMC4-218ENST00000486711 MSL2Q9HCI7 577 aa6.39□□□□□ -1.39
SMC4-218ENST00000486711 PCDH12Q9NPG4 1184 aa6.39□□□□□ -1.39
SMC4-218ENST00000486711 NR2E1Q9Y466 385 aa6.39□□□□□ -1.39
SMC4-218ENST00000486711 CCDC66A2RUB6 948 aa6.38□□□□□ -1.39
SMC4-218ENST00000486711 ZNF561-AS1K7EIQ3 104 aa6.38□□□□□ -1.39
SMC4-218ENST00000486711 OPA1O60313 960 aa6.38□□□□□ -1.39
SMC4-218ENST00000486711 PDE8AO60658 829 aa6.38□□□□□ -1.39
SMC4-218ENST00000486711 C4BPAP04003 597 aaKnown RBP6.38□□□□□ -1.39
SMC4-218ENST00000486711 HMGCRP04035 888 aa6.38□□□□□ -1.39
SMC4-218ENST00000486711 SRGAP2CP0DJJ0 459 aa6.38□□□□□ -1.39
SMC4-218ENST00000486711 JAM2P57087 298 aa6.38□□□□□ -1.39
SMC4-218ENST00000486711 NFYCQ13952 458 aa6.38□□□□□ -1.39
SMC4-218ENST00000486711 RNF207Q6ZRF8 634 aa6.38□□□□□ -1.39
SMC4-218ENST00000486711 ZC3H7AQ8IWR0 971 aaKnown RBP6.38□□□□□ -1.39
SMC4-218ENST00000486711 AHI1Q8N157 1196 aa6.38□□□□□ -1.39
SMC4-218ENST00000486711 GSTCDQ8NEC7 633 aa6.38□□□□□ -1.39
SMC4-218ENST00000486711 SLC7A14Q8TBB6 771 aa6.38□□□□□ -1.39
SMC4-218ENST00000486711 PCED1AQ9H1Q7 454 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms