RNA–Protein interactions for RNA: ENST00000485901.1

HLA-DOA-204, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

Gene HLA-DOA, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-204ENST00000485901 LMAN2LQ9H0V9 348 aa13.55□□□□□ -0.24
HLA-DOA-204ENST00000485901 ERAP1Q9NZ08 941 aa13.55□□□□□ -0.24
HLA-DOA-204ENST00000485901 TELO2Q9Y4R8 837 aa13.55□□□□□ -0.24
HLA-DOA-204ENST00000485901 TTC3P53804 2025 aa13.54□□□□□ -0.24
HLA-DOA-204ENST00000485901 C5orf67F2Z3F1 127 aa13.54□□□□□ -0.24
HLA-DOA-204ENST00000485901 DDX39AO00148 427 aaKnown RBP13.54□□□□□ -0.24
HLA-DOA-204ENST00000485901 MSH4O15457 936 aa13.54□□□□□ -0.24
HLA-DOA-204ENST00000485901 GCFC2P16383 781 aaKnown RBP13.54□□□□□ -0.24
HLA-DOA-204ENST00000485901 THPOP40225 353 aa13.54□□□□□ -0.24
HLA-DOA-204ENST00000485901 STAT5BP51692 787 aa13.54□□□□□ -0.24
HLA-DOA-204ENST00000485901 KRT76Q01546 638 aa13.54□□□□□ -0.24
HLA-DOA-204ENST00000485901 NR5A1Q13285 461 aa13.54□□□□□ -0.24
HLA-DOA-204ENST00000485901 EPC2Q52LR7 807 aa13.54□□□□□ -0.24
HLA-DOA-204ENST00000485901 PPP4R3AQ6IN85 833 aa13.54□□□□□ -0.24
HLA-DOA-204ENST00000485901 PTCRAQ6ISU1 281 aaPredicted RBP13.54□□□□□ -0.24
HLA-DOA-204ENST00000485901 ZNF746Q6NUN9 644 aaPredicted RBP13.54□□□□□ -0.24
HLA-DOA-204ENST00000485901 MIS18BP1Q6P0N0 1132 aa13.54□□□□□ -0.24
HLA-DOA-204ENST00000485901 PLPPR4Q7Z2D5 763 aa13.54□□□□□ -0.24
HLA-DOA-204ENST00000485901 SPRED2Q7Z698 418 aa13.54□□□□□ -0.24
HLA-DOA-204ENST00000485901 MYOCDQ8IZQ8 938 aa13.54□□□□□ -0.24
HLA-DOA-204ENST00000485901 TNFRSF25Q93038 417 aa13.54□□□□□ -0.24
HLA-DOA-204ENST00000485901 MBOAT7Q96N66 472 aa13.54□□□□□ -0.24
HLA-DOA-204ENST00000485901 UIMC1Q96RL1 719 aa13.54□□□□□ -0.24
HLA-DOA-204ENST00000485901 RIT2Q99578 217 aa13.54□□□□□ -0.24
HLA-DOA-204ENST00000485901 DDX25Q9UHL0 483 aaKnown RBP13.54□□□□□ -0.24
HLA-DOA-204ENST00000485901 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.54□□□□□ -0.24
HLA-DOA-204ENST00000485901 POTEB3A0JP26 581 aa13.53□□□□□ -0.24
HLA-DOA-204ENST00000485901 CCNT1O60563 726 aaKnown RBP13.53□□□□□ -0.24
HLA-DOA-204ENST00000485901 TDP2O95551 362 aa13.53□□□□□ -0.24
HLA-DOA-204ENST00000485901 CCNE2O96020 404 aa13.53□□□□□ -0.24
HLA-DOA-204ENST00000485901 SMIM10L2AP0DMW4 78 aa13.53□□□□□ -0.24
HLA-DOA-204ENST00000485901 SMIM10L2BP0DMW5 78 aa13.53□□□□□ -0.24
HLA-DOA-204ENST00000485901 KCNA5P22460 613 aa13.53□□□□□ -0.24
HLA-DOA-204ENST00000485901 GUCY1B3Q02153 619 aa13.53□□□□□ -0.24
HLA-DOA-204ENST00000485901 TCTN1Q2MV58 587 aa13.53□□□□□ -0.24
HLA-DOA-204ENST00000485901 POTEBQ6S5H4 581 aa13.53□□□□□ -0.24
HLA-DOA-204ENST00000485901 ABHD15Q6UXT9 468 aa13.53□□□□□ -0.24
HLA-DOA-204ENST00000485901 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.53□□□□□ -0.24
HLA-DOA-204ENST00000485901 TRIM50Q86XT4 487 aa13.53□□□□□ -0.24
HLA-DOA-204ENST00000485901 TMEM192Q8IY95 271 aa13.53□□□□□ -0.24
HLA-DOA-204ENST00000485901 SMAP1Q8IYB5 467 aaPredicted RBP13.53□□□□□ -0.24
HLA-DOA-204ENST00000485901 BANK1Q8NDB2 785 aa13.53□□□□□ -0.24
HLA-DOA-204ENST00000485901 SLC5A5Q92911 643 aa13.53□□□□□ -0.24
HLA-DOA-204ENST00000485901 WNT8BQ93098 351 aa13.53□□□□□ -0.24
HLA-DOA-204ENST00000485901 YME1L1Q96TA2 773 aa13.53□□□□□ -0.24
HLA-DOA-204ENST00000485901 FOXP1Q9H334 677 aaPredicted RBP13.53□□□□□ -0.24
HLA-DOA-204ENST00000485901 RNPEPQ9H4A4 650 aa13.53□□□□□ -0.24
HLA-DOA-204ENST00000485901 NSUN3Q9H649 340 aaKnown RBP13.53□□□□□ -0.24
HLA-DOA-204ENST00000485901 ZNF318Q5VUA4 2279 aa13.52□□□□□ -0.24
HLA-DOA-204ENST00000485901 IGKV6D-21A0A0A0MT36 114 aa13.52□□□□□ -0.25
HLA-DOA-204ENST00000485901 BACH1O14867 736 aa13.52□□□□□ -0.25
HLA-DOA-204ENST00000485901 GAS7O60861 476 aa13.52□□□□□ -0.25
HLA-DOA-204ENST00000485901 PSAPP07602 524 aa13.52□□□□□ -0.25
HLA-DOA-204ENST00000485901 SLC26A2P50443 739 aa13.52□□□□□ -0.25
HLA-DOA-204ENST00000485901 ADAM17P78536 824 aa13.52□□□□□ -0.25
HLA-DOA-204ENST00000485901 GPM6BQ13491 265 aa13.52□□□□□ -0.25
HLA-DOA-204ENST00000485901 EARS2Q5JPH6 523 aaKnown RBP13.52□□□□□ -0.25
HLA-DOA-204ENST00000485901 LRCH2Q5VUJ6 765 aa13.52□□□□□ -0.25
HLA-DOA-204ENST00000485901 FAM160B1Q5W0V3 765 aa13.52□□□□□ -0.25
HLA-DOA-204ENST00000485901 TAF2Q6P1X5 1199 aa13.52□□□□□ -0.25
HLA-DOA-204ENST00000485901 TMCO2Q7Z6W1 182 aaPredicted RBP13.52□□□□□ -0.25
HLA-DOA-204ENST00000485901 FAM20AQ96MK3 541 aa13.52□□□□□ -0.25
HLA-DOA-204ENST00000485901 PCYT2Q99447 389 aa13.52□□□□□ -0.25
HLA-DOA-204ENST00000485901 C17orf80Q9BSJ5 609 aa13.52□□□□□ -0.25
HLA-DOA-204ENST00000485901 TEKT3Q9BXF9 490 aa13.52□□□□□ -0.25
HLA-DOA-204ENST00000485901 CD320Q9NPF0 282 aa13.52□□□□□ -0.25
HLA-DOA-204ENST00000485901 MTUS1Q9ULD2 1270 aa13.52□□□□□ -0.25
HLA-DOA-204ENST00000485901 SMC3Q9UQE7 1217 aa13.52□□□□□ -0.25
HLA-DOA-204ENST00000485901 SAMM50Q9Y512 469 aa13.52□□□□□ -0.25
HLA-DOA-204ENST00000485901 PCDHA10Q9Y5I2 948 aa13.52□□□□□ -0.25
HLA-DOA-204ENST00000485901 NRCAMQ92823 1304 aa13.52□□□□□ -0.25
HLA-DOA-204ENST00000485901 C19orf67A6NJJ6 358 aa13.51□□□□□ -0.25
HLA-DOA-204ENST00000485901 TBX3O15119 743 aa13.51□□□□□ -0.25
HLA-DOA-204ENST00000485901 DCXO43602 365 aa13.51□□□□□ -0.25
HLA-DOA-204ENST00000485901 MARCH6O60337 910 aa13.51□□□□□ -0.25
HLA-DOA-204ENST00000485901 BAG4O95429 457 aaKnown RBP13.51□□□□□ -0.25
HLA-DOA-204ENST00000485901 MARK3P27448 753 aa13.51□□□□□ -0.25
HLA-DOA-204ENST00000485901 SFNP31947 248 aa13.51□□□□□ -0.25
HLA-DOA-204ENST00000485901 ZNF200P98182 395 aaPredicted RBP13.51□□□□□ -0.25
HLA-DOA-204ENST00000485901 GNL2Q13823 731 aaKnown RBP13.51□□□□□ -0.25
HLA-DOA-204ENST00000485901 HIC1Q14526 733 aa13.51□□□□□ -0.25
HLA-DOA-204ENST00000485901 NAALADL2Q58DX5 795 aa13.51□□□□□ -0.25
HLA-DOA-204ENST00000485901 SWSAP1Q6NVH7 229 aa13.51□□□□□ -0.25
HLA-DOA-204ENST00000485901 ETNPPLQ8TBG4 499 aa13.51□□□□□ -0.25
HLA-DOA-204ENST00000485901 KHSRPQ92945 711 aaKnown RBP eCLIP13.51□□□□□ -0.25
HLA-DOA-204ENST00000485901 POP1Q99575 1024 aaKnown RBP13.51□□□□□ -0.25
HLA-DOA-204ENST00000485901 C11orf84Q9BUA3 381 aaPredicted RBP13.51□□□□□ -0.25
HLA-DOA-204ENST00000485901 PLVAPQ9BX97 442 aa13.51□□□□□ -0.25
HLA-DOA-204ENST00000485901 ZNF302Q9NR11 478 aa13.51□□□□□ -0.25
HLA-DOA-204ENST00000485901 SETD4Q9NVD3 440 aa13.51□□□□□ -0.25
HLA-DOA-204ENST00000485901 SQORQ9Y6N5 450 aa13.51□□□□□ -0.25
HLA-DOA-204ENST00000485901 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.5□□□□□ -0.25
HLA-DOA-204ENST00000485901 FAM205CA6NFA0 338 aa13.5□□□□□ -0.25
HLA-DOA-204ENST00000485901 RRN3P2A6NIE6 340 aa13.5□□□□□ -0.25
HLA-DOA-204ENST00000485901 WDR64B1ANS9 1081 aa13.5□□□□□ -0.25
HLA-DOA-204ENST00000485901 TREHO43280 583 aa13.5□□□□□ -0.25
HLA-DOA-204ENST00000485901 SLC37A4O43826 429 aa13.5□□□□□ -0.25
HLA-DOA-204ENST00000485901 PSMD10O75832 226 aa13.5□□□□□ -0.25
HLA-DOA-204ENST00000485901 IL9P15248 144 aa13.5□□□□□ -0.25
HLA-DOA-204ENST00000485901 GJB2P29033 226 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms