RNA–Protein interactions for RNA: ENST00000485465.1

CHMP3-207, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 920 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-207ENST00000485465 TIGD1Q96MW7 591 aa19.6■□□□□ 0.73
CHMP3-207ENST00000485465 BHMT2Q9H2M3 363 aa19.6■□□□□ 0.73
CHMP3-207ENST00000485465 MAGEF1Q9HAY2 307 aa19.6■□□□□ 0.73
CHMP3-207ENST00000485465 PHF24Q9UPV7 400 aa19.6■□□□□ 0.73
CHMP3-207ENST00000485465 WDR81Q562E7 1941 aa19.59■□□□□ 0.73
CHMP3-207ENST00000485465 ARHGEF35A5YM69 484 aa19.59■□□□□ 0.73
CHMP3-207ENST00000485465 KINO60870 393 aaKnown RBP19.59■□□□□ 0.73
CHMP3-207ENST00000485465 SSBP05455 408 aaKnown RBP eCLIP19.59■□□□□ 0.73
CHMP3-207ENST00000485465 RARRES1P49788 294 aa19.59■□□□□ 0.73
CHMP3-207ENST00000485465 SLC12A3P55017 1021 aa19.59■□□□□ 0.73
CHMP3-207ENST00000485465 CHMP4BP1P59074 171 aa19.59■□□□□ 0.73
CHMP3-207ENST00000485465 TARBP2Q15633 366 aaKnown RBP19.59■□□□□ 0.73
CHMP3-207ENST00000485465 ZNF484Q5JVG2 852 aa19.59■□□□□ 0.73
CHMP3-207ENST00000485465 SV2BQ7L1I2 683 aa19.59■□□□□ 0.73
CHMP3-207ENST00000485465 CCDC43Q96MW1 224 aaKnown RBP19.59■□□□□ 0.73
CHMP3-207ENST00000485465 SH2D3AQ9BRG2 576 aa19.59■□□□□ 0.73
CHMP3-207ENST00000485465 CYP26B1Q9NR63 512 aa19.59■□□□□ 0.73
CHMP3-207ENST00000485465 KBTBD4Q9NVX7 518 aa19.59■□□□□ 0.73
CHMP3-207ENST00000485465 ZBTB42B2RXF5 422 aa19.58■□□□□ 0.72
CHMP3-207ENST00000485465 SMIM10L2AP0DMW4 78 aa19.58■□□□□ 0.72
CHMP3-207ENST00000485465 SMIM10L2BP0DMW5 78 aa19.58■□□□□ 0.72
CHMP3-207ENST00000485465 INSRRP14616 1297 aa19.58■□□□□ 0.72
CHMP3-207ENST00000485465 CAPN2P17655 700 aa19.58■□□□□ 0.72
CHMP3-207ENST00000485465 DHX8Q14562 1220 aaKnown RBP19.58■□□□□ 0.72
CHMP3-207ENST00000485465 NBPF20Q3BBV1 942 aa19.58■□□□□ 0.72
CHMP3-207ENST00000485465 MTERF2Q49AM1 385 aa19.58■□□□□ 0.72
CHMP3-207ENST00000485465 VTI1AQ96AJ9 217 aa19.58■□□□□ 0.72
CHMP3-207ENST00000485465 PAGE5Q96GU1 130 aa19.58■□□□□ 0.72
CHMP3-207ENST00000485465 GLT1D1Q96MS3 346 aa19.58■□□□□ 0.72
CHMP3-207ENST00000485465 TNMDQ9H2S6 317 aa19.58■□□□□ 0.72
CHMP3-207ENST00000485465 PPME1Q9Y570 386 aa19.58■□□□□ 0.72
CHMP3-207ENST00000485465 MYH9P35579 1960 aaKnown RBP19.57■□□□□ 0.72
CHMP3-207ENST00000485465 A0A1W2PQ45 241 aaPredicted RBP19.57■□□□□ 0.72
CHMP3-207ENST00000485465 A0A1W2PQY0 241 aa19.57■□□□□ 0.72
CHMP3-207ENST00000485465 MNX1P50219 401 aaPredicted RBP19.57■□□□□ 0.72
CHMP3-207ENST00000485465 PPFIA1Q13136 1202 aa19.57■□□□□ 0.72
CHMP3-207ENST00000485465 KANK3Q6NY19 840 aa19.57■□□□□ 0.72
CHMP3-207ENST00000485465 PADI6Q6TGC4 694 aa19.57■□□□□ 0.72
CHMP3-207ENST00000485465 SH3RF1Q7Z6J0 888 aa19.57■□□□□ 0.72
CHMP3-207ENST00000485465 C7orf31Q8N865 590 aa19.57■□□□□ 0.72
CHMP3-207ENST00000485465 STAMQ92783 540 aa19.57■□□□□ 0.72
CHMP3-207ENST00000485465 CEP89Q96ST8 783 aa19.57■□□□□ 0.72
CHMP3-207ENST00000485465 MTRQ99707 1265 aa19.57■□□□□ 0.72
CHMP3-207ENST00000485465 COL1A2P08123 1366 aa19.57■□□□□ 0.72
CHMP3-207ENST00000485465 GRIN2DO15399 1336 aa19.56■□□□□ 0.72
CHMP3-207ENST00000485465 RRN3P2A6NIE6 340 aa19.56■□□□□ 0.72
CHMP3-207ENST00000485465 AFMP43652 599 aa19.56■□□□□ 0.72
CHMP3-207ENST00000485465 AMPD3Q01432 767 aa19.56■□□□□ 0.72
CHMP3-207ENST00000485465 GRIK4Q16099 956 aa19.56■□□□□ 0.72
CHMP3-207ENST00000485465 SKOR2Q2VWA4 1001 aaPredicted RBP19.56■□□□□ 0.72
CHMP3-207ENST00000485465 COL13A1Q5TAT6 717 aaPredicted RBP19.56■□□□□ 0.72
CHMP3-207ENST00000485465 RINT1Q6NUQ1 792 aa19.56■□□□□ 0.72
CHMP3-207ENST00000485465 GPBP1Q86WP2 473 aa19.56■□□□□ 0.72
CHMP3-207ENST00000485465 ELOA2Q8IYF1 753 aaPredicted RBP19.56■□□□□ 0.72
CHMP3-207ENST00000485465 GRAMD1CQ8IYS0 662 aa19.56■□□□□ 0.72
CHMP3-207ENST00000485465 ANKLE1Q8NAG6 615 aa19.56■□□□□ 0.72
CHMP3-207ENST00000485465 PPP1R13LQ8WUF5 828 aa19.56■□□□□ 0.72
CHMP3-207ENST00000485465 TRAPPC12Q8WVT3 735 aa19.56■□□□□ 0.72
CHMP3-207ENST00000485465 CCDC34Q96HJ3 373 aa19.56■□□□□ 0.72
CHMP3-207ENST00000485465 LRRC27Q9C0I9 530 aa19.56■□□□□ 0.72
CHMP3-207ENST00000485465 SETD4Q9NVD3 440 aa19.56■□□□□ 0.72
CHMP3-207ENST00000485465 HDAC6Q9UBN7 1215 aa19.56■□□□□ 0.72
CHMP3-207ENST00000485465 NRCAMQ92823 1304 aa19.55■□□□□ 0.72
CHMP3-207ENST00000485465 MYMKA6NI61 221 aa19.55■□□□□ 0.72
CHMP3-207ENST00000485465 CYP11B2P19099 503 aa19.55■□□□□ 0.72
CHMP3-207ENST00000485465 RFC5P40937 340 aa19.55■□□□□ 0.72
CHMP3-207ENST00000485465 IGBP1P78318 339 aa19.55■□□□□ 0.72
CHMP3-207ENST00000485465 MDM2Q00987 491 aaPredicted RBP19.55■□□□□ 0.72
CHMP3-207ENST00000485465 ITGA7Q13683 1181 aa19.55■□□□□ 0.72
CHMP3-207ENST00000485465 KLHL40Q2TBA0 621 aa19.55■□□□□ 0.72
CHMP3-207ENST00000485465 ARSHQ5FYA8 562 aa19.55■□□□□ 0.72
CHMP3-207ENST00000485465 NFRKBQ6P4R8 1299 aa19.55■□□□□ 0.72
CHMP3-207ENST00000485465 C1orf186Q6ZWK4 172 aa19.55■□□□□ 0.72
CHMP3-207ENST00000485465 RUSC1Q9BVN2 902 aa19.55■□□□□ 0.72
CHMP3-207ENST00000485465 CLSTN2Q9H4D0 955 aa19.55■□□□□ 0.72
CHMP3-207ENST00000485465 STARD7Q9NQZ5 370 aa19.55■□□□□ 0.72
CHMP3-207ENST00000485465 PDLIM7Q9NR12 457 aa19.55■□□□□ 0.72
CHMP3-207ENST00000485465 KCND2Q9NZV8 630 aa19.55■□□□□ 0.72
CHMP3-207ENST00000485465 SCN10AQ9Y5Y9 1956 aa19.54■□□□□ 0.72
CHMP3-207ENST00000485465 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.54■□□□□ 0.72
CHMP3-207ENST00000485465 C17orf102A2RUQ5 167 aa19.54■□□□□ 0.72
CHMP3-207ENST00000485465 USO1O60763 962 aaKnown RBP19.54■□□□□ 0.72
CHMP3-207ENST00000485465 DGAT1O75907 488 aa19.54■□□□□ 0.72
CHMP3-207ENST00000485465 HOXC8P31273 242 aa19.54■□□□□ 0.72
CHMP3-207ENST00000485465 TBC1D8BQ0IIM8 1120 aa19.54■□□□□ 0.72
CHMP3-207ENST00000485465 SESTD1Q86VW0 696 aa19.54■□□□□ 0.72
CHMP3-207ENST00000485465 EXOC8Q8IYI6 725 aa19.54■□□□□ 0.72
CHMP3-207ENST00000485465 LMBR1Q8WVP7 490 aa19.54■□□□□ 0.72
CHMP3-207ENST00000485465 C7orf25Q9BPX7 421 aa19.54■□□□□ 0.72
CHMP3-207ENST00000485465 DHX33Q9H6R0 707 aaKnown RBP19.54■□□□□ 0.72
CHMP3-207ENST00000485465 BMP2KQ9NSY1 1161 aaPredicted RBP19.54■□□□□ 0.72
CHMP3-207ENST00000485465 HOOK1Q9UJC3 728 aaKnown RBP19.54■□□□□ 0.72
CHMP3-207ENST00000485465 NPHP3-ACAD11A0A0J9YXS1 232 aa19.53■□□□□ 0.72
CHMP3-207ENST00000485465 A0A0U1RQG5 324 aaPredicted RBP19.53■□□□□ 0.72
CHMP3-207ENST00000485465 MAGEB2O15479 319 aa19.53■□□□□ 0.72
CHMP3-207ENST00000485465 GTPBP6O43824 516 aaPredicted RBP19.53■□□□□ 0.72
CHMP3-207ENST00000485465 TRAK2O60296 914 aa19.53■□□□□ 0.72
CHMP3-207ENST00000485465 MAFO75444 373 aaPredicted RBP19.53■□□□□ 0.72
CHMP3-207ENST00000485465 C22orf31O95567 290 aa19.53■□□□□ 0.72
CHMP3-207ENST00000485465 GNAT1P11488 350 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms