RNA–Protein interactions for RNA: ENST00000483876.1

COL17A1-206, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 622 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-206ENST00000483876 STAM2O75886 525 aa6.02□□□□□ -1.45
COL17A1-206ENST00000483876 LYPLA2O95372 231 aa6.02□□□□□ -1.45
COL17A1-206ENST00000483876 FGFR1OPO95684 399 aaKnown RBP6.02□□□□□ -1.45
COL17A1-206ENST00000483876 MYCNP04198 464 aaPredicted RBP6.02□□□□□ -1.45
COL17A1-206ENST00000483876 SPATA31C1P0DKV0 1188 aa6.02□□□□□ -1.45
COL17A1-206ENST00000483876 ATP1A3P13637 1013 aa6.02□□□□□ -1.45
COL17A1-206ENST00000483876 CCNE1P24864 410 aa6.02□□□□□ -1.45
COL17A1-206ENST00000483876 KCNJ6P48051 423 aa6.02□□□□□ -1.45
COL17A1-206ENST00000483876 ASIC1P78348 528 aa6.02□□□□□ -1.45
COL17A1-206ENST00000483876 PDE4DQ08499 809 aa6.02□□□□□ -1.45
COL17A1-206ENST00000483876 PAK1Q13153 545 aa6.02□□□□□ -1.45
COL17A1-206ENST00000483876 EPHA7Q15375 998 aa6.02□□□□□ -1.45
COL17A1-206ENST00000483876 FILIP1LQ4L180 1135 aa6.02□□□□□ -1.45
COL17A1-206ENST00000483876 PPP2R2DQ66LE6 453 aa6.02□□□□□ -1.45
COL17A1-206ENST00000483876 CENPPQ6IPU0 288 aa6.02□□□□□ -1.45
COL17A1-206ENST00000483876 RNF207Q6ZRF8 634 aa6.02□□□□□ -1.45
COL17A1-206ENST00000483876 APTXQ7Z2E3 356 aaKnown RBP6.02□□□□□ -1.45
COL17A1-206ENST00000483876 VSIG10LQ86VR7 867 aa6.02□□□□□ -1.45
COL17A1-206ENST00000483876 FCHSD1Q86WN1 690 aa6.02□□□□□ -1.45
COL17A1-206ENST00000483876 VSTM4Q8IW00 320 aa6.02□□□□□ -1.45
COL17A1-206ENST00000483876 SUGP1Q8IWZ8 645 aaKnown RBP6.02□□□□□ -1.45
COL17A1-206ENST00000483876 GUF1Q8N442 669 aaKnown RBP6.02□□□□□ -1.45
COL17A1-206ENST00000483876 SYT2Q8N9I0 419 aaPredicted RBP6.02□□□□□ -1.45
COL17A1-206ENST00000483876 PROCA1Q8NCQ7 364 aaPredicted RBP6.02□□□□□ -1.45
COL17A1-206ENST00000483876 CCDC150Q8NCX0 1101 aa6.02□□□□□ -1.45
COL17A1-206ENST00000483876 CHST13Q8NET6 341 aa6.02□□□□□ -1.45
COL17A1-206ENST00000483876 NEK9Q8TD19 979 aa6.02□□□□□ -1.45
COL17A1-206ENST00000483876 SYTL5Q8TDW5 730 aaPredicted RBP6.02□□□□□ -1.45
COL17A1-206ENST00000483876 LRRC15Q8TF66 581 aa6.02□□□□□ -1.45
COL17A1-206ENST00000483876 NELFBQ8WX92 580 aa6.02□□□□□ -1.45
COL17A1-206ENST00000483876 STAMQ92783 540 aa6.02□□□□□ -1.45
COL17A1-206ENST00000483876 DNAJC19Q96DA6 116 aa6.02□□□□□ -1.45
COL17A1-206ENST00000483876 TRERF1Q96PN7 1200 aa6.02□□□□□ -1.45
COL17A1-206ENST00000483876 NACC1Q96RE7 527 aa6.02□□□□□ -1.45
COL17A1-206ENST00000483876 NUDT12Q9BQG2 462 aa6.02□□□□□ -1.45
COL17A1-206ENST00000483876 TEX13BQ9BXU2 312 aa6.02□□□□□ -1.45
COL17A1-206ENST00000483876 TANGO6Q9C0B7 1094 aa6.02□□□□□ -1.45
COL17A1-206ENST00000483876 THAP9Q9H5L6 903 aa6.02□□□□□ -1.45
COL17A1-206ENST00000483876 JADE2Q9NQC1 790 aa6.02□□□□□ -1.45
COL17A1-206ENST00000483876 EXOC1Q9NV70 894 aa6.02□□□□□ -1.45
COL17A1-206ENST00000483876 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.02□□□□□ -1.45
COL17A1-206ENST00000483876 FBXO40Q9UH90 709 aa6.02□□□□□ -1.45
COL17A1-206ENST00000483876 KIAA1024Q9UPX6 916 aa6.02□□□□□ -1.45
COL17A1-206ENST00000483876 UBIAD1Q9Y5Z9 338 aa6.02□□□□□ -1.45
COL17A1-206ENST00000483876 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.02□□□□□ -1.45
COL17A1-206ENST00000483876 MYH7BA7E2Y1 1941 aa6.01□□□□□ -1.45
COL17A1-206ENST00000483876 ZNF318Q5VUA4 2279 aa6.01□□□□□ -1.45
COL17A1-206ENST00000483876 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.01□□□□□ -1.45
COL17A1-206ENST00000483876 H0Y858 1186 aa6.01□□□□□ -1.45
COL17A1-206ENST00000483876 RFXAPO00287 272 aa6.01□□□□□ -1.45
COL17A1-206ENST00000483876 IPO5O00410 1097 aaKnown RBP6.01□□□□□ -1.45
COL17A1-206ENST00000483876 DHX15O43143 795 aaKnown RBP6.01□□□□□ -1.45
COL17A1-206ENST00000483876 MED24O75448 989 aa6.01□□□□□ -1.45
COL17A1-206ENST00000483876 SLITRK3O94933 977 aa6.01□□□□□ -1.45
COL17A1-206ENST00000483876 EYA4O95677 639 aa6.01□□□□□ -1.45
COL17A1-206ENST00000483876 TUBB4AP04350 444 aa6.01□□□□□ -1.45
COL17A1-206ENST00000483876 CLTBP09497 229 aa6.01□□□□□ -1.45
COL17A1-206ENST00000483876 PLA2G4BP0C869 781 aa6.01□□□□□ -1.45
COL17A1-206ENST00000483876 ALAS1P13196 640 aa6.01□□□□□ -1.45
COL17A1-206ENST00000483876 IL9P15248 144 aa6.01□□□□□ -1.45
COL17A1-206ENST00000483876 ITGB5P18084 799 aa6.01□□□□□ -1.45
COL17A1-206ENST00000483876 PTGS1P23219 599 aa6.01□□□□□ -1.45
COL17A1-206ENST00000483876 CASP1P29466 404 aa6.01□□□□□ -1.45
COL17A1-206ENST00000483876 COPB2P35606 906 aa6.01□□□□□ -1.45
COL17A1-206ENST00000483876 STAT3P40763 770 aa6.01□□□□□ -1.45
COL17A1-206ENST00000483876 HMGCS2P54868 508 aa6.01□□□□□ -1.45
COL17A1-206ENST00000483876 SLC12A3P55017 1021 aa6.01□□□□□ -1.45
COL17A1-206ENST00000483876 RPS6P62753 249 aaKnown RBP6.01□□□□□ -1.45
COL17A1-206ENST00000483876 LRRC63Q05C16 580 aa6.01□□□□□ -1.45
COL17A1-206ENST00000483876 STK4Q13043 487 aa6.01□□□□□ -1.45
COL17A1-206ENST00000483876 TBX2Q13207 712 aaPredicted RBP6.01□□□□□ -1.45
COL17A1-206ENST00000483876 MCM6Q14566 821 aa6.01□□□□□ -1.45
COL17A1-206ENST00000483876 NOLC1Q14978 699 aaKnown RBP eCLIP6.01□□□□□ -1.45
COL17A1-206ENST00000483876 SNX17Q15036 470 aa6.01□□□□□ -1.45
COL17A1-206ENST00000483876 ECM1Q16610 540 aa6.01□□□□□ -1.45
COL17A1-206ENST00000483876 TPD52L1Q16890 204 aaPredicted RBP6.01□□□□□ -1.45
COL17A1-206ENST00000483876 LRCH2Q5VUJ6 765 aa6.01□□□□□ -1.45
COL17A1-206ENST00000483876 SPECC1LQ69YQ0 1117 aa6.01□□□□□ -1.45
COL17A1-206ENST00000483876 TTI2Q6NXR4 508 aa6.01□□□□□ -1.45
COL17A1-206ENST00000483876 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.01□□□□□ -1.45
COL17A1-206ENST00000483876 FASTKD5Q7L8L6 764 aaKnown RBP6.01□□□□□ -1.45
COL17A1-206ENST00000483876 BMP8AQ7Z5Y6 402 aa6.01□□□□□ -1.45
COL17A1-206ENST00000483876 CCDC84Q86UT8 332 aaPredicted RBP6.01□□□□□ -1.45
COL17A1-206ENST00000483876 FAM114A1Q8IWE2 563 aa6.01□□□□□ -1.45
COL17A1-206ENST00000483876 CCDC65Q8IXS2 484 aa6.01□□□□□ -1.45
COL17A1-206ENST00000483876 CPXCR1Q8N123 301 aa6.01□□□□□ -1.45
COL17A1-206ENST00000483876 SPC24Q8NBT2 197 aa6.01□□□□□ -1.45
COL17A1-206ENST00000483876 CCDC112Q8NEF3 446 aa6.01□□□□□ -1.45
COL17A1-206ENST00000483876 RDM1Q8NG50 284 aa6.01□□□□□ -1.45
COL17A1-206ENST00000483876 CYP2W1Q8TAV3 490 aa6.01□□□□□ -1.45
COL17A1-206ENST00000483876 NSUN6Q8TEA1 469 aaKnown RBP6.01□□□□□ -1.45
COL17A1-206ENST00000483876 CACTINQ8WUQ7 758 aaKnown RBP6.01□□□□□ -1.45
COL17A1-206ENST00000483876 DDX12PQ92771 950 aa6.01□□□□□ -1.45
COL17A1-206ENST00000483876 P2RX5Q93086 422 aa6.01□□□□□ -1.45
COL17A1-206ENST00000483876 IQCDQ96DY2 449 aa6.01□□□□□ -1.45
COL17A1-206ENST00000483876 CDHR1Q96JP9 859 aa6.01□□□□□ -1.45
COL17A1-206ENST00000483876 NAP1L5Q96NT1 182 aaPredicted RBP6.01□□□□□ -1.45
COL17A1-206ENST00000483876 IWS1Q96ST2 819 aa6.01□□□□□ -1.45
COL17A1-206ENST00000483876 PLIN2Q99541 437 aa6.01□□□□□ -1.45
COL17A1-206ENST00000483876 SENP7Q9BQF6 1050 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms