RNA–Protein interactions for RNA: ENST00000483212.1

USP4-210, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 2

Gene USP4, Length 727 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-210ENST00000483212 MFSD14CQ5VZR4 134 aa9.18□□□□□ -0.94
USP4-210ENST00000483212 ARID2Q68CP9 1835 aa9.18□□□□□ -0.94
USP4-210ENST00000483212 PLA2G4FQ68DD2 849 aa9.18□□□□□ -0.94
USP4-210ENST00000483212 DYMQ7RTS9 669 aa9.18□□□□□ -0.94
USP4-210ENST00000483212 TLK2Q86UE8 772 aa9.18□□□□□ -0.94
USP4-210ENST00000483212 TRIM50Q86XT4 487 aa9.18□□□□□ -0.94
USP4-210ENST00000483212 DAW1Q8N136 415 aa9.18□□□□□ -0.94
USP4-210ENST00000483212 OR6J1Q8NGC5 347 aa9.18□□□□□ -0.94
USP4-210ENST00000483212 PXYLP1Q8TE99 480 aa9.18□□□□□ -0.94
USP4-210ENST00000483212 REEP2Q9BRK0 252 aa9.18□□□□□ -0.94
USP4-210ENST00000483212 C16orf70Q9BSU1 422 aa9.18□□□□□ -0.94
USP4-210ENST00000483212 NIFKQ9BYG3 293 aaKnown RBP9.18□□□□□ -0.94
USP4-210ENST00000483212 LRRC27Q9C0I9 530 aa9.18□□□□□ -0.94
USP4-210ENST00000483212 RBSNQ9H1K0 784 aa9.18□□□□□ -0.94
USP4-210ENST00000483212 PDLIM7Q9NR12 457 aa9.18□□□□□ -0.94
USP4-210ENST00000483212 ANO10Q9NW15 660 aa9.18□□□□□ -0.94
USP4-210ENST00000483212 FAM184BQ9ULE4 1060 aa9.18□□□□□ -0.94
USP4-210ENST00000483212 PCDHA2Q9Y5H9 948 aa9.18□□□□□ -0.94
USP4-210ENST00000483212 LOXHD1Q8IVV2 1947 aa9.17□□□□□ -0.94
USP4-210ENST00000483212 ARHGEF35A5YM69 484 aa9.17□□□□□ -0.94
USP4-210ENST00000483212 RSPH10B2B2RC85 870 aa9.17□□□□□ -0.94
USP4-210ENST00000483212 ZBTB42B2RXF5 422 aa9.17□□□□□ -0.94
USP4-210ENST00000483212 NOP56O00567 594 aaKnown RBP9.17□□□□□ -0.94
USP4-210ENST00000483212 ADCY3O60266 1144 aa9.17□□□□□ -0.94
USP4-210ENST00000483212 PPFIA4O75335 1185 aa9.17□□□□□ -0.94
USP4-210ENST00000483212 HMGCRP04035 888 aa9.17□□□□□ -0.94
USP4-210ENST00000483212 LGALS2P05162 132 aa9.17□□□□□ -0.94
USP4-210ENST00000483212 SSBP05455 408 aaKnown RBP eCLIP9.17□□□□□ -0.94
USP4-210ENST00000483212 RSPH10BP0C881 870 aa9.17□□□□□ -0.94
USP4-210ENST00000483212 CD44P16070 742 aaKnown RBP9.17□□□□□ -0.94
USP4-210ENST00000483212 ZNF131P52739 623 aa9.17□□□□□ -0.94
USP4-210ENST00000483212 ASIC1P78348 528 aa9.17□□□□□ -0.94
USP4-210ENST00000483212 IRX5P78411 483 aaPredicted RBP9.17□□□□□ -0.94
USP4-210ENST00000483212 COASYQ13057 564 aa9.17□□□□□ -0.94
USP4-210ENST00000483212 GSE1Q14687 1217 aa9.17□□□□□ -0.94
USP4-210ENST00000483212 PLCB4Q15147 1175 aa9.17□□□□□ -0.94
USP4-210ENST00000483212 ANO6Q4KMQ2 910 aa9.17□□□□□ -0.94
USP4-210ENST00000483212 COBLL1Q53SF7 1204 aa9.17□□□□□ -0.94
USP4-210ENST00000483212 UTP14CQ5TAP6 766 aaKnown RBP9.17□□□□□ -0.94
USP4-210ENST00000483212 ZNF658Q5TYW1 1059 aaPredicted RBP9.17□□□□□ -0.94
USP4-210ENST00000483212 FAM160B1Q5W0V3 765 aa9.17□□□□□ -0.94
USP4-210ENST00000483212 ISM2Q6H9L7 571 aa9.17□□□□□ -0.94
USP4-210ENST00000483212 PADI6Q6TGC4 694 aa9.17□□□□□ -0.94
USP4-210ENST00000483212 KIAA0895Q8NCT3 520 aa9.17□□□□□ -0.94
USP4-210ENST00000483212 MED15Q96RN5 788 aa9.17□□□□□ -0.94
USP4-210ENST00000483212 FIZ1Q96SL8 496 aa9.17□□□□□ -0.94
USP4-210ENST00000483212 SH2D3AQ9BRG2 576 aa9.17□□□□□ -0.94
USP4-210ENST00000483212 FGFBP2Q9BYJ0 223 aa9.17□□□□□ -0.94
USP4-210ENST00000483212 UPF3AQ9H1J1 476 aaKnown RBP9.17□□□□□ -0.94
USP4-210ENST00000483212 DNAJC25Q9H1X3 360 aa9.17□□□□□ -0.94
USP4-210ENST00000483212 XPNPEP1Q9NQW7 623 aa9.17□□□□□ -0.94
USP4-210ENST00000483212 RMND1Q9NWS8 449 aa9.17□□□□□ -0.94
USP4-210ENST00000483212 KCND2Q9NZV8 630 aa9.17□□□□□ -0.94
USP4-210ENST00000483212 GDAQ9Y2T3 454 aa9.17□□□□□ -0.94
USP4-210ENST00000483212 MYADML2A6NDP7 307 aa9.16□□□□□ -0.94
USP4-210ENST00000483212 PPP1R3GB7ZBB8 358 aa9.16□□□□□ -0.94
USP4-210ENST00000483212 SEPT4O43236 478 aa9.16□□□□□ -0.94
USP4-210ENST00000483212 DYNC1LI2O43237 492 aaPredicted RBP9.16□□□□□ -0.94
USP4-210ENST00000483212 DUSP11O75319 330 aaKnown RBP9.16□□□□□ -0.94
USP4-210ENST00000483212 F2P00734 622 aa9.16□□□□□ -0.94
USP4-210ENST00000483212 CCND3P30281 292 aaPredicted RBP9.16□□□□□ -0.94
USP4-210ENST00000483212 SLC26A2P50443 739 aa9.16□□□□□ -0.94
USP4-210ENST00000483212 GJA9P57773 515 aa9.16□□□□□ -0.94
USP4-210ENST00000483212 STK4Q13043 487 aa9.16□□□□□ -0.94
USP4-210ENST00000483212 IQCB1Q15051 598 aa9.16□□□□□ -0.94
USP4-210ENST00000483212 XKR9Q5GH70 373 aa9.16□□□□□ -0.94
USP4-210ENST00000483212 OTUD6AQ7L8S5 288 aa9.16□□□□□ -0.94
USP4-210ENST00000483212 SMYD4Q8IYR2 804 aaPredicted RBP9.16□□□□□ -0.94
USP4-210ENST00000483212 MLKLQ8NB16 471 aa9.16□□□□□ -0.94
USP4-210ENST00000483212 RAET1EQ8TD07 263 aa9.16□□□□□ -0.94
USP4-210ENST00000483212 ATP8B4Q8TF62 1192 aa9.16□□□□□ -0.94
USP4-210ENST00000483212 BBXQ8WY36 941 aaPredicted RBP9.16□□□□□ -0.94
USP4-210ENST00000483212 HPS3Q969F9 1004 aa9.16□□□□□ -0.94
USP4-210ENST00000483212 BPIFA3Q9BQP9 254 aa9.16□□□□□ -0.94
USP4-210ENST00000483212 SMARCAD1Q9H4L7 1026 aa9.16□□□□□ -0.94
USP4-210ENST00000483212 DHX33Q9H6R0 707 aaKnown RBP9.16□□□□□ -0.94
USP4-210ENST00000483212 AZI2Q9H6S1 392 aa9.16□□□□□ -0.94
USP4-210ENST00000483212 CYP26B1Q9NR63 512 aa9.16□□□□□ -0.94
USP4-210ENST00000483212 PANK4Q9NVE7 773 aa9.16□□□□□ -0.94
USP4-210ENST00000483212 SEPT9Q9UHD8 586 aaPredicted RBP9.16□□□□□ -0.94
USP4-210ENST00000483212 ODF2LQ9ULJ1 636 aa9.16□□□□□ -0.94
USP4-210ENST00000483212 PTCH2Q9Y6C5 1203 aa9.16□□□□□ -0.94
USP4-210ENST00000483212 SYNRGQ9UMZ2 1314 aa9.15□□□□□ -0.94
USP4-210ENST00000483212 HAS3O00219 553 aa9.15□□□□□ -0.94
USP4-210ENST00000483212 USO1O60763 962 aaKnown RBP9.15□□□□□ -0.94
USP4-210ENST00000483212 HIP1RO75146 1068 aa9.15□□□□□ -0.94
USP4-210ENST00000483212 ADAMTS4O75173 837 aa9.15□□□□□ -0.94
USP4-210ENST00000483212 CAVIN2O95810 425 aa9.15□□□□□ -0.94
USP4-210ENST00000483212 ZNF286BP0CG31 522 aa9.15□□□□□ -0.94
USP4-210ENST00000483212 IDEP14735 1019 aa9.15□□□□□ -0.94
USP4-210ENST00000483212 MARK3P27448 753 aa9.15□□□□□ -0.94
USP4-210ENST00000483212 RAD51AP2Q09MP3 1159 aa9.15□□□□□ -0.94
USP4-210ENST00000483212 PSMD2Q13200 908 aa9.15□□□□□ -0.94
USP4-210ENST00000483212 NCAPHQ15003 741 aa9.15□□□□□ -0.94
USP4-210ENST00000483212 ARHGEF6Q15052 776 aa9.15□□□□□ -0.94
USP4-210ENST00000483212 DGKDQ16760 1214 aa9.15□□□□□ -0.94
USP4-210ENST00000483212 MTERF2Q49AM1 385 aa9.15□□□□□ -0.94
USP4-210ENST00000483212 EPM2AIP1Q7L775 607 aaPredicted RBP9.15□□□□□ -0.94
USP4-210ENST00000483212 SFR1Q86XK3 245 aa9.15□□□□□ -0.94
USP4-210ENST00000483212 DHX40Q8IX18 779 aaKnown RBP9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms