RNA–Protein interactions for RNA: ENST00000482272.5

CTDSP1-208, Transcript of CTD small phosphatase 1, humanhuman

TSL 2

Gene CTDSP1, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-208ENST00000482272 BANK1Q8NDB2 785 aa15.23■□□□□ 0.03
CTDSP1-208ENST00000482272 ZNF689Q96CS4 500 aaPredicted RBP15.23■□□□□ 0.03
CTDSP1-208ENST00000482272 AIFM3Q96NN9 605 aa15.23■□□□□ 0.03
CTDSP1-208ENST00000482272 TM6SF1Q9BZW5 370 aa15.23■□□□□ 0.03
CTDSP1-208ENST00000482272 RNF216Q9NWF9 866 aaPredicted RBP15.23■□□□□ 0.03
CTDSP1-208ENST00000482272 CEP131Q9UPN4 1083 aa15.23■□□□□ 0.03
CTDSP1-208ENST00000482272 ADGRA3Q8IWK6 1321 aa15.22■□□□□ 0.03
CTDSP1-208ENST00000482272 ZBTB42B2RXF5 422 aa15.22■□□□□ 0.03
CTDSP1-208ENST00000482272 DEXIO95424 95 aa15.22■□□□□ 0.03
CTDSP1-208ENST00000482272 LINC00271P0C7V0 271 aa15.22■□□□□ 0.03
CTDSP1-208ENST00000482272 CTNNB1P35222 781 aa15.22■□□□□ 0.03
CTDSP1-208ENST00000482272 NPY5RQ15761 445 aa15.22■□□□□ 0.03
CTDSP1-208ENST00000482272 TRMT1LQ7Z2T5 733 aaKnown RBP15.22■□□□□ 0.03
CTDSP1-208ENST00000482272 KIAA0319LQ8IZA0 1049 aa15.22■□□□□ 0.03
CTDSP1-208ENST00000482272 NECAB3Q96P71 396 aaPredicted RBP15.22■□□□□ 0.03
CTDSP1-208ENST00000482272 C11orf84Q9BUA3 381 aaPredicted RBP15.22■□□□□ 0.03
CTDSP1-208ENST00000482272 LMAN2LQ9H0V9 348 aa15.22■□□□□ 0.03
CTDSP1-208ENST00000482272 UBE2ZQ9H832 354 aaPredicted RBP15.22■□□□□ 0.03
CTDSP1-208ENST00000482272 NRBP2Q9NSY0 501 aa15.22■□□□□ 0.03
CTDSP1-208ENST00000482272 LRFN2Q9ULH4 789 aa15.22■□□□□ 0.03
CTDSP1-208ENST00000482272 GINS2Q9Y248 185 aa15.22■□□□□ 0.03
CTDSP1-208ENST00000482272 RALGAPA2Q2PPJ7 1873 aa15.22■□□□□ 0.03
CTDSP1-208ENST00000482272 GPR182O15218 404 aa15.21■□□□□ 0.03
CTDSP1-208ENST00000482272 RPS6KA5O75582 802 aa15.21■□□□□ 0.03
CTDSP1-208ENST00000482272 LEXMQ3ZCV2 418 aa15.21■□□□□ 0.03
CTDSP1-208ENST00000482272 NPAS4Q8IUM7 802 aa15.21■□□□□ 0.03
CTDSP1-208ENST00000482272 CLP1Q92989 425 aaKnown RBP15.21■□□□□ 0.03
CTDSP1-208ENST00000482272 GJA10Q969M2 543 aa15.21■□□□□ 0.03
CTDSP1-208ENST00000482272 FAM167AQ96KS9 214 aa15.21■□□□□ 0.03
CTDSP1-208ENST00000482272 RIT2Q99578 217 aa15.21■□□□□ 0.03
CTDSP1-208ENST00000482272 PLVAPQ9BX97 442 aa15.21■□□□□ 0.03
CTDSP1-208ENST00000482272 NSUN3Q9H649 340 aaKnown RBP15.21■□□□□ 0.03
CTDSP1-208ENST00000482272 RC3H2Q9HBD1 1191 aaKnown RBP15.21■□□□□ 0.03
CTDSP1-208ENST00000482272 PDRG1Q9NUG6 133 aa15.21■□□□□ 0.03
CTDSP1-208ENST00000482272 GABBR1Q9UBS5 961 aa15.21■□□□□ 0.03
CTDSP1-208ENST00000482272 PCDHA4Q9UN74 947 aa15.21■□□□□ 0.03
CTDSP1-208ENST00000482272 WDR64B1ANS9 1081 aa15.2■□□□□ 0.02
CTDSP1-208ENST00000482272 MSH4O15457 936 aa15.2■□□□□ 0.02
CTDSP1-208ENST00000482272 MAGEB2O15479 319 aa15.2■□□□□ 0.02
CTDSP1-208ENST00000482272 NCK2O43639 380 aa15.2■□□□□ 0.02
CTDSP1-208ENST00000482272 KCNA5P22460 613 aa15.2■□□□□ 0.02
CTDSP1-208ENST00000482272 SFNP31947 248 aa15.2■□□□□ 0.02
CTDSP1-208ENST00000482272 STK3Q13188 491 aa15.2■□□□□ 0.02
CTDSP1-208ENST00000482272 TMEM266Q2M3C6 531 aa15.2■□□□□ 0.02
CTDSP1-208ENST00000482272 PUS10Q3MIT2 529 aaKnown RBP15.2■□□□□ 0.02
CTDSP1-208ENST00000482272 GALNT17Q6IS24 598 aa15.2■□□□□ 0.02
CTDSP1-208ENST00000482272 CMTR2Q8IYT2 770 aaKnown RBP15.2■□□□□ 0.02
CTDSP1-208ENST00000482272 FAM177A1Q8N128 213 aaPredicted RBP15.2■□□□□ 0.02
CTDSP1-208ENST00000482272 METTL13Q8N6R0 699 aa15.2■□□□□ 0.02
CTDSP1-208ENST00000482272 TBCKQ8TEA7 893 aa15.2■□□□□ 0.02
CTDSP1-208ENST00000482272 DISC1Q9NRI5 854 aa15.2■□□□□ 0.02
CTDSP1-208ENST00000482272 PCDHB7Q9Y5E2 793 aa15.2■□□□□ 0.02
CTDSP1-208ENST00000482272 EVPLQ92817 2033 aa15.2■□□□□ 0.02
CTDSP1-208ENST00000482272 TTC3P53804 2025 aa15.19■□□□□ 0.02
CTDSP1-208ENST00000482272 MYH9P35579 1960 aaKnown RBP15.19■□□□□ 0.02
CTDSP1-208ENST00000482272 DENND3A2RUS2 1198 aa15.19■□□□□ 0.02
CTDSP1-208ENST00000482272 M0R2N6 131 aa15.19■□□□□ 0.02
CTDSP1-208ENST00000482272 GAS7O60861 476 aa15.19■□□□□ 0.02
CTDSP1-208ENST00000482272 C22orf31O95567 290 aa15.19■□□□□ 0.02
CTDSP1-208ENST00000482272 TMOD1P28289 359 aa15.19■□□□□ 0.02
CTDSP1-208ENST00000482272 CRYBB1P53674 252 aaPredicted RBP15.19■□□□□ 0.02
CTDSP1-208ENST00000482272 NAALADL2Q58DX5 795 aa15.19■□□□□ 0.02
CTDSP1-208ENST00000482272 TCEAL5Q5H9L2 206 aa15.19■□□□□ 0.02
CTDSP1-208ENST00000482272 BLIDQ8IZY5 108 aa15.19■□□□□ 0.02
CTDSP1-208ENST00000482272 CRIPAKQ8N1N5 446 aa15.19■□□□□ 0.02
CTDSP1-208ENST00000482272 ZNF710Q8N1W2 664 aa15.19■□□□□ 0.02
CTDSP1-208ENST00000482272 P2RX5Q93086 422 aa15.19■□□□□ 0.02
CTDSP1-208ENST00000482272 TEKT3Q9BXF9 490 aa15.19■□□□□ 0.02
CTDSP1-208ENST00000482272 TMX1Q9H3N1 280 aa15.19■□□□□ 0.02
CTDSP1-208ENST00000482272 CDHR5Q9HBB8 845 aa15.19■□□□□ 0.02
CTDSP1-208ENST00000482272 C1orf112Q9NSG2 853 aa15.19■□□□□ 0.02
CTDSP1-208ENST00000482272 ST3GAL5Q9UNP4 418 aa15.19■□□□□ 0.02
CTDSP1-208ENST00000482272 NOC2LQ9Y3T9 749 aaKnown RBP15.19■□□□□ 0.02
CTDSP1-208ENST00000482272 GRM6O15303 877 aa15.18■□□□□ 0.02
CTDSP1-208ENST00000482272 CDKL5O76039 1030 aa15.18■□□□□ 0.02
CTDSP1-208ENST00000482272 SARSP49591 514 aaKnown RBP15.18■□□□□ 0.02
CTDSP1-208ENST00000482272 JAK3P52333 1124 aa15.18■□□□□ 0.02
CTDSP1-208ENST00000482272 Q4G0T1 1027 aa15.18■□□□□ 0.02
CTDSP1-208ENST00000482272 LRCH2Q5VUJ6 765 aa15.18■□□□□ 0.02
CTDSP1-208ENST00000482272 EFCAB12Q6NXP0 572 aa15.18■□□□□ 0.02
CTDSP1-208ENST00000482272 EP400NLQ6ZTU2 488 aa15.18■□□□□ 0.02
CTDSP1-208ENST00000482272 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.18■□□□□ 0.02
CTDSP1-208ENST00000482272 TMEM40Q8WWA1 233 aa15.18■□□□□ 0.02
CTDSP1-208ENST00000482272 SLC5A5Q92911 643 aa15.18■□□□□ 0.02
CTDSP1-208ENST00000482272 PABPC5Q96DU9 382 aaKnown RBP15.18■□□□□ 0.02
CTDSP1-208ENST00000482272 MAP7D2Q96T17 732 aa15.18■□□□□ 0.02
CTDSP1-208ENST00000482272 ADAM2Q99965 735 aa15.18■□□□□ 0.02
CTDSP1-208ENST00000482272 C1QTNF1Q9BXJ1 281 aa15.18■□□□□ 0.02
CTDSP1-208ENST00000482272 ERVK-5Q9HDB9 667 aa15.18■□□□□ 0.02
CTDSP1-208ENST00000482272 RGS18Q9NS28 235 aa15.18■□□□□ 0.02
CTDSP1-208ENST00000482272 GJB4Q9NTQ9 266 aa15.18■□□□□ 0.02
CTDSP1-208ENST00000482272 VTNP04004 478 aa15.17■□□□□ 0.02
CTDSP1-208ENST00000482272 OATP04181 439 aa15.17■□□□□ 0.02
CTDSP1-208ENST00000482272 XBP1P17861 261 aa15.17■□□□□ 0.02
CTDSP1-208ENST00000482272 IBSPP21815 317 aaPredicted RBP15.17■□□□□ 0.02
CTDSP1-208ENST00000482272 SCRN1Q12765 414 aa15.17■□□□□ 0.02
CTDSP1-208ENST00000482272 UGCGQ16739 394 aa15.17■□□□□ 0.02
CTDSP1-208ENST00000482272 KIZQ2M2Z5 673 aa15.17■□□□□ 0.02
CTDSP1-208ENST00000482272 PAN2Q504Q3 1202 aaKnown RBP15.17■□□□□ 0.02
CTDSP1-208ENST00000482272 PTCRAQ6ISU1 281 aaPredicted RBP15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms