RNA–Protein interactions for RNA: ENST00000481708.1

SMC6-208, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 3,897 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-208ENST00000481708 WIPI1Q5MNZ9 446 aaPredicted RBP3.96□□□□□ -1.77
SMC6-208ENST00000481708 ATAT1Q5SQI0 421 aa3.96□□□□□ -1.77
SMC6-208ENST00000481708 CEP135Q66GS9 1140 aa3.96□□□□□ -1.77
SMC6-208ENST00000481708 ANKRD23Q86SG2 305 aa3.96□□□□□ -1.77
SMC6-208ENST00000481708 TMTC1Q8IUR5 882 aa3.96□□□□□ -1.77
SMC6-208ENST00000481708 TMEM145Q8NBT3 493 aa3.96□□□□□ -1.77
SMC6-208ENST00000481708 ASB12Q8WXK4 309 aa3.96□□□□□ -1.77
SMC6-208ENST00000481708 LPIN3Q9BQK8 851 aa3.96□□□□□ -1.77
SMC6-208ENST00000481708 SLC6A14Q9UN76 642 aa3.96□□□□□ -1.77
SMC6-208ENST00000481708 ZNF281Q9Y2X9 895 aa3.96□□□□□ -1.77
SMC6-208ENST00000481708 COL1A1P02452 1464 aaPredicted RBP3.96□□□□□ -1.78
SMC6-208ENST00000481708 WDR64B1ANS9 1081 aa3.96□□□□□ -1.78
SMC6-208ENST00000481708 CBX4O00257 560 aa3.96□□□□□ -1.78
SMC6-208ENST00000481708 ORC4O43929 436 aa3.96□□□□□ -1.78
SMC6-208ENST00000481708 SNUPNO95149 360 aaKnown RBP3.96□□□□□ -1.78
SMC6-208ENST00000481708 CKMP06732 381 aa3.96□□□□□ -1.78
SMC6-208ENST00000481708 BMP4P12644 408 aa3.96□□□□□ -1.78
SMC6-208ENST00000481708 NTF4P34130 210 aa3.96□□□□□ -1.78
SMC6-208ENST00000481708 IREB2P48200 963 aaKnown RBP3.96□□□□□ -1.78
SMC6-208ENST00000481708 C1QTNF8P60827 252 aa3.96□□□□□ -1.78
SMC6-208ENST00000481708 PIP4K2BP78356 416 aa3.96□□□□□ -1.78
SMC6-208ENST00000481708 LILRA6Q6PI73 481 aa3.96□□□□□ -1.78
SMC6-208ENST00000481708 HVCN1Q96D96 273 aa3.96□□□□□ -1.78
SMC6-208ENST00000481708 AHCYL2Q96HN2 611 aaKnown RBP3.96□□□□□ -1.78
SMC6-208ENST00000481708 TRERF1Q96PN7 1200 aa3.96□□□□□ -1.78
SMC6-208ENST00000481708 ZC3H12CQ9C0D7 883 aaKnown RBP3.96□□□□□ -1.78
SMC6-208ENST00000481708 PRKRIP1Q9H875 184 aaPredicted RBP3.96□□□□□ -1.78
SMC6-208ENST00000481708 TUBD1Q9UJT1 453 aa3.96□□□□□ -1.78
SMC6-208ENST00000481708 LMNB1P20700 586 aa3.96□□□□□ -1.78
SMC6-208ENST00000481708 PDIA3P30101 505 aaKnown RBP3.96□□□□□ -1.78
SMC6-208ENST00000481708 NUCB1Q02818 461 aa3.96□□□□□ -1.78
SMC6-208ENST00000481708 RNFT1Q5M7Z0 435 aa3.96□□□□□ -1.78
SMC6-208ENST00000481708 IQSEC1Q6DN90 963 aa3.96□□□□□ -1.78
SMC6-208ENST00000481708 SV2AQ7L0J3 742 aa3.96□□□□□ -1.78
SMC6-208ENST00000481708 MYD88Q99836 296 aa3.96□□□□□ -1.78
SMC6-208ENST00000481708 SEZ6LQ9BYH1 1024 aa3.96□□□□□ -1.78
SMC6-208ENST00000481708 TOPORSQ9NS56 1045 aaPredicted RBP3.96□□□□□ -1.78
SMC6-208ENST00000481708 PDP2Q9P2J9 529 aa3.96□□□□□ -1.78
SMC6-208ENST00000481708 GRHPRQ9UBQ7 328 aa3.96□□□□□ -1.78
SMC6-208ENST00000481708 SOX13Q9UN79 622 aa3.96□□□□□ -1.78
SMC6-208ENST00000481708 IFIT1P09914 478 aaKnown RBP3.95□□□□□ -1.78
SMC6-208ENST00000481708 HSP90AA2PQ14568 343 aaPredicted RBP3.95□□□□□ -1.78
SMC6-208ENST00000481708 HEATR4Q86WZ0 1026 aa3.95□□□□□ -1.78
SMC6-208ENST00000481708 PTRH1Q86Y79 214 aaKnown RBP3.95□□□□□ -1.78
SMC6-208ENST00000481708 TCP11L2Q8N4U5 519 aa3.95□□□□□ -1.78
SMC6-208ENST00000481708 GPBAR1Q8TDU6 330 aa3.95□□□□□ -1.78
SMC6-208ENST00000481708 PPP1R16BQ96T49 567 aa3.95□□□□□ -1.78
SMC6-208ENST00000481708 MPHOSPH9Q99550 1183 aa3.95□□□□□ -1.78
SMC6-208ENST00000481708 SAMD15Q9P1V8 674 aa3.95□□□□□ -1.78
SMC6-208ENST00000481708 GIT1Q9Y2X7 761 aa3.95□□□□□ -1.78
SMC6-208ENST00000481708 PCDHA8Q9Y5H6 950 aa3.95□□□□□ -1.78
SMC6-208ENST00000481708 LRRFIP2Q9Y608 721 aaKnown RBP3.95□□□□□ -1.78
SMC6-208ENST00000481708 RASA4BC9J798 803 aa3.95□□□□□ -1.78
SMC6-208ENST00000481708 RASA4O43374 803 aa3.95□□□□□ -1.78
SMC6-208ENST00000481708 ZBED1O96006 694 aa3.95□□□□□ -1.78
SMC6-208ENST00000481708 RPN1P04843 607 aaKnown RBP3.95□□□□□ -1.78
SMC6-208ENST00000481708 MX2P20592 715 aa3.95□□□□□ -1.78
SMC6-208ENST00000481708 HOXC13P31276 330 aa3.95□□□□□ -1.78
SMC6-208ENST00000481708 GALNSP34059 522 aa3.95□□□□□ -1.78
SMC6-208ENST00000481708 PPM1AP35813 382 aa3.95□□□□□ -1.78
SMC6-208ENST00000481708 ADH7P40394 386 aa3.95□□□□□ -1.78
SMC6-208ENST00000481708 PLBD1Q6P4A8 553 aa3.95□□□□□ -1.78
SMC6-208ENST00000481708 PGM2L1Q6PCE3 622 aa3.95□□□□□ -1.78
SMC6-208ENST00000481708 ARMCX6Q7L4S7 300 aa3.95□□□□□ -1.78
SMC6-208ENST00000481708 UBE3DQ7Z6J8 389 aa3.95□□□□□ -1.78
SMC6-208ENST00000481708 SLFN12Q8IYM2 578 aa3.95□□□□□ -1.78
SMC6-208ENST00000481708 SIMC1Q8NDZ2 872 aa3.95□□□□□ -1.78
SMC6-208ENST00000481708 RIN2Q8WYP3 895 aaPredicted RBP3.95□□□□□ -1.78
SMC6-208ENST00000481708 BSNDQ8WZ55 320 aa3.95□□□□□ -1.78
SMC6-208ENST00000481708 TTC17Q96AE7 1141 aa3.95□□□□□ -1.78
SMC6-208ENST00000481708 RIPOR3Q96MK2 946 aa3.95□□□□□ -1.78
SMC6-208ENST00000481708 NT5C1BQ96P26 610 aa3.95□□□□□ -1.78
SMC6-208ENST00000481708 SLC2A13Q96QE2 648 aa3.95□□□□□ -1.78
SMC6-208ENST00000481708 NUP88Q99567 741 aaPredicted RBP3.95□□□□□ -1.78
SMC6-208ENST00000481708 SMG9Q9H0W8 520 aaKnown RBP3.95□□□□□ -1.78
SMC6-208ENST00000481708 DMRT3Q9NQL9 472 aa3.95□□□□□ -1.78
SMC6-208ENST00000481708 MRGBPQ9NV56 204 aa3.95□□□□□ -1.78
SMC6-208ENST00000481708 KLHL3Q9UH77 587 aa3.95□□□□□ -1.78
SMC6-208ENST00000481708 CRYL1Q9Y2S2 319 aa3.95□□□□□ -1.78
SMC6-208ENST00000481708 ZNF451Q9Y4E5 1061 aa3.95□□□□□ -1.78
SMC6-208ENST00000481708 GFRA1P56159 465 aa3.95□□□□□ -1.78
SMC6-208ENST00000481708 NEUROD1Q13562 356 aa3.95□□□□□ -1.78
SMC6-208ENST00000481708 BROXQ5VW32 411 aa3.95□□□□□ -1.78
SMC6-208ENST00000481708 LIN54Q6MZP7 749 aa3.95□□□□□ -1.78
SMC6-208ENST00000481708 RSRC2Q7L4I2 434 aaKnown RBP3.95□□□□□ -1.78
SMC6-208ENST00000481708 AHI1Q8N157 1196 aa3.95□□□□□ -1.78
SMC6-208ENST00000481708 C18orf8Q96DM3 657 aa3.95□□□□□ -1.78
SMC6-208ENST00000481708 WNK4Q96J92 1243 aa3.95□□□□□ -1.78
SMC6-208ENST00000481708 LACRTQ9GZZ8 138 aa3.95□□□□□ -1.78
SMC6-208ENST00000481708 SH2B1Q9NRF2 756 aaPredicted RBP3.95□□□□□ -1.78
SMC6-208ENST00000481708 THG1LQ9NWX6 298 aaKnown RBP3.95□□□□□ -1.78
SMC6-208ENST00000481708 RTEL1Q9NZ71 1219 aa3.95□□□□□ -1.78
SMC6-208ENST00000481708 GIMAP2Q9UG22 337 aa3.95□□□□□ -1.78
SMC6-208ENST00000481708 FBXO10Q9UK96 956 aa3.95□□□□□ -1.78
SMC6-208ENST00000481708 SLC4A7Q9Y6M7 1214 aa3.95□□□□□ -1.78
SMC6-208ENST00000481708 IQCA1LA6NCM1 817 aa3.95□□□□□ -1.78
SMC6-208ENST00000481708 NEURL1BA8MQ27 555 aa3.95□□□□□ -1.78
SMC6-208ENST00000481708 ADARB2-AS1A8MUL3 147 aa3.95□□□□□ -1.78
SMC6-208ENST00000481708 KPNA5O15131 536 aa3.95□□□□□ -1.78
SMC6-208ENST00000481708 CTNND1O60716 968 aaKnown RBP3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms