RNA–Protein interactions for RNA: ENST00000481456.1

DDX39B-219, Transcript of DExD-box helicase 39B, humanhuman

TSL 2

Gene DDX39B, Length 5,158 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-219ENST00000481456 ANKS1AQ92625 1134 aa12.43□□□□□ -0.42
DDX39B-219ENST00000481456 RILPQ96NA2 401 aa12.43□□□□□ -0.42
DDX39B-219ENST00000481456 TMEM260Q9NX78 707 aa12.43□□□□□ -0.42
DDX39B-219ENST00000481456 EXOC1LA0A1B0GW35 172 aa12.42□□□□□ -0.42
DDX39B-219ENST00000481456 ZNF211Q13398 564 aaPredicted RBP12.42□□□□□ -0.42
DDX39B-219ENST00000481456 MEA1Q16626 185 aa12.42□□□□□ -0.42
DDX39B-219ENST00000481456 SCYL3Q8IZE3 742 aa12.42□□□□□ -0.42
DDX39B-219ENST00000481456 YIPF3Q9GZM5 350 aa12.42□□□□□ -0.42
DDX39B-219ENST00000481456 ARHGEF10LQ9HCE6 1279 aa12.42□□□□□ -0.42
DDX39B-219ENST00000481456 GGPS1O95749 300 aa12.42□□□□□ -0.42
DDX39B-219ENST00000481456 NSFP46459 744 aaKnown RBP12.42□□□□□ -0.42
DDX39B-219ENST00000481456 USP11P51784 963 aa12.42□□□□□ -0.42
DDX39B-219ENST00000481456 TRPM8Q7Z2W7 1104 aa12.42□□□□□ -0.42
DDX39B-219ENST00000481456 TGS1Q96RS0 853 aaKnown RBP12.42□□□□□ -0.42
DDX39B-219ENST00000481456 FAM217BQ9NTX9 383 aaPredicted RBP12.42□□□□□ -0.42
DDX39B-219ENST00000481456 MYMKA6NI61 221 aa12.42□□□□□ -0.42
DDX39B-219ENST00000481456 BAG2O95816 211 aa12.42□□□□□ -0.42
DDX39B-219ENST00000481456 ATF7P17544 494 aaPredicted RBP12.42□□□□□ -0.42
DDX39B-219ENST00000481456 CAV1Q03135 178 aa12.42□□□□□ -0.42
DDX39B-219ENST00000481456 KIAA1755Q5JYT7 1200 aa12.42□□□□□ -0.42
DDX39B-219ENST00000481456 MIER3Q7Z3K6 550 aa12.42□□□□□ -0.42
DDX39B-219ENST00000481456 SFR1Q86XK3 245 aa12.42□□□□□ -0.42
DDX39B-219ENST00000481456 TCHPQ9BT92 498 aa12.42□□□□□ -0.42
DDX39B-219ENST00000481456 CPVLQ9H3G5 476 aa12.42□□□□□ -0.42
DDX39B-219ENST00000481456 C1orf112Q9NSG2 853 aa12.42□□□□□ -0.42
DDX39B-219ENST00000481456 USP40Q9NVE5 1235 aa12.42□□□□□ -0.42
DDX39B-219ENST00000481456 LEMD3Q9Y2U8 911 aa12.42□□□□□ -0.42
DDX39B-219ENST00000481456 MON2Q7Z3U7 1717 aa12.42□□□□□ -0.42
DDX39B-219ENST00000481456 TXNDC9O14530 226 aa12.42□□□□□ -0.42
DDX39B-219ENST00000481456 AMPD2Q01433 879 aa12.42□□□□□ -0.42
DDX39B-219ENST00000481456 TROAPQ12815 778 aa12.42□□□□□ -0.42
DDX39B-219ENST00000481456 CRYMQ14894 314 aa12.42□□□□□ -0.42
DDX39B-219ENST00000481456 RBM26Q5T8P6 1007 aaKnown RBP12.42□□□□□ -0.42
DDX39B-219ENST00000481456 RSAD2Q8WXG1 361 aa12.42□□□□□ -0.42
DDX39B-219ENST00000481456 GRAMD1AQ96CP6 724 aa12.42□□□□□ -0.42
DDX39B-219ENST00000481456 TRIM51Q9BSJ1 452 aa12.42□□□□□ -0.42
DDX39B-219ENST00000481456 AMNQ9BXJ7 453 aa12.42□□□□□ -0.42
DDX39B-219ENST00000481456 PARVGQ9HBI0 331 aa12.42□□□□□ -0.42
DDX39B-219ENST00000481456 NOD2Q9HC29 1040 aa12.42□□□□□ -0.42
DDX39B-219ENST00000481456 LOC102724428A0A0B4J2F2 783 aa12.41□□□□□ -0.42
DDX39B-219ENST00000481456 MAP3K7O43318 606 aa12.41□□□□□ -0.42
DDX39B-219ENST00000481456 OPHN1O60890 802 aa12.41□□□□□ -0.42
DDX39B-219ENST00000481456 SCTRP47872 440 aa12.41□□□□□ -0.42
DDX39B-219ENST00000481456 SIK1P57059 783 aa12.41□□□□□ -0.42
DDX39B-219ENST00000481456 SPARCL1Q14515 664 aa12.41□□□□□ -0.42
DDX39B-219ENST00000481456 TRIP13Q15645 432 aaPredicted RBP12.41□□□□□ -0.42
DDX39B-219ENST00000481456 DDX42Q86XP3 938 aaKnown RBP eCLIP12.41□□□□□ -0.422e-7■■□□□ 13.8
DDX39B-219ENST00000481456 SH3RF3Q8TEJ3 882 aaPredicted RBP12.41□□□□□ -0.42
DDX39B-219ENST00000481456 ETNK1Q9HBU6 452 aa12.41□□□□□ -0.42
DDX39B-219ENST00000481456 KBTBD4Q9NVX7 518 aa12.41□□□□□ -0.42
DDX39B-219ENST00000481456 ARL2BPQ9Y2Y0 163 aa12.41□□□□□ -0.42
DDX39B-219ENST00000481456 GPC5P78333 572 aa12.41□□□□□ -0.42
DDX39B-219ENST00000481456 LRRC14Q15048 493 aa12.41□□□□□ -0.42
DDX39B-219ENST00000481456 SH2D4BQ5SQS7 431 aa12.41□□□□□ -0.42
DDX39B-219ENST00000481456 SPATA21Q7Z572 469 aa12.41□□□□□ -0.42
DDX39B-219ENST00000481456 TEX2Q8IWB9 1127 aa12.41□□□□□ -0.42
DDX39B-219ENST00000481456 NT5C1BQ96P26 610 aa12.41□□□□□ -0.42
DDX39B-219ENST00000481456 USP15Q9Y4E8 981 aaPredicted RBP12.41□□□□□ -0.42
DDX39B-219ENST00000481456 C3P01024 1663 aa12.41□□□□□ -0.42
DDX39B-219ENST00000481456 CCND1P24385 295 aa12.41□□□□□ -0.42
DDX39B-219ENST00000481456 PRDX5P30044 214 aa12.41□□□□□ -0.42
DDX39B-219ENST00000481456 BFSP1Q12934 665 aa12.41□□□□□ -0.42
DDX39B-219ENST00000481456 NR1H3Q13133 447 aa12.41□□□□□ -0.42
DDX39B-219ENST00000481456 CCDC137Q6PK04 289 aaKnown RBP12.41□□□□□ -0.42
DDX39B-219ENST00000481456 CREG2Q8IUH2 290 aa12.41□□□□□ -0.42
DDX39B-219ENST00000481456 KCNV2Q8TDN2 545 aa12.41□□□□□ -0.42
DDX39B-219ENST00000481456 HDAC7Q8WUI4 952 aa12.41□□□□□ -0.42
DDX39B-219ENST00000481456 RAPGEF5Q92565 580 aa12.41□□□□□ -0.42
DDX39B-219ENST00000481456 TEKT3Q9BXF9 490 aa12.41□□□□□ -0.42
DDX39B-219ENST00000481456 VCX3AQ9NNX9 186 aa12.41□□□□□ -0.42
DDX39B-219ENST00000481456 ARHGAP20Q9P2F6 1191 aa12.41□□□□□ -0.42
DDX39B-219ENST00000481456 ZNF219Q9P2Y4 722 aaPredicted RBP12.41□□□□□ -0.42
DDX39B-219ENST00000481456 RIMS1Q86UR5 1692 aaKnown RBP12.41□□□□□ -0.42
DDX39B-219ENST00000481456 USP17L5A8MUK1 530 aa12.41□□□□□ -0.42
DDX39B-219ENST00000481456 TOM1O60784 492 aa12.41□□□□□ -0.42
DDX39B-219ENST00000481456 TDP2O95551 362 aa12.41□□□□□ -0.42
DDX39B-219ENST00000481456 GLI1P08151 1106 aa12.41□□□□□ -0.42
DDX39B-219ENST00000481456 BRAFP15056 766 aa12.41□□□□□ -0.42
DDX39B-219ENST00000481456 SLC16A2P36021 539 aa12.41□□□□□ -0.42
DDX39B-219ENST00000481456 PKN1Q16512 942 aa12.41□□□□□ -0.42
DDX39B-219ENST00000481456 TRAPPC3LQ5T215 181 aa12.41□□□□□ -0.42
DDX39B-219ENST00000481456 SLFN13Q68D06 897 aa12.41□□□□□ -0.42
DDX39B-219ENST00000481456 KCTD1Q719H9 257 aa12.41□□□□□ -0.42
DDX39B-219ENST00000481456 KSR1Q8IVT5 923 aa12.41□□□□□ -0.42
DDX39B-219ENST00000481456 PDCD7Q8N8D1 485 aaKnown RBP12.41□□□□□ -0.42
DDX39B-219ENST00000481456 MORC4Q8TE76 937 aa12.41□□□□□ -0.42
DDX39B-219ENST00000481456 DONSONQ9NYP3 566 aa12.41□□□□□ -0.42
DDX39B-219ENST00000481456 TMEM94Q12767 1356 aa12.41□□□□□ -0.42
DDX39B-219ENST00000481456 MYO5BQ9ULV0 1848 aa12.41□□□□□ -0.42
DDX39B-219ENST00000481456 STXBP3O00186 592 aa12.41□□□□□ -0.42
DDX39B-219ENST00000481456 ZNF662Q6ZS27 426 aa12.41□□□□□ -0.42
DDX39B-219ENST00000481456 EPM2AIP1Q7L775 607 aaPredicted RBP12.41□□□□□ -0.42
DDX39B-219ENST00000481456 OGFOD1Q8N543 542 aa12.41□□□□□ -0.42
DDX39B-219ENST00000481456 SH3GL3Q99963 347 aa12.41□□□□□ -0.42
DDX39B-219ENST00000481456 ANO3Q9BYT9 981 aa12.41□□□□□ -0.42
DDX39B-219ENST00000481456 ARHGAP42A6NI28 874 aa12.4□□□□□ -0.42
DDX39B-219ENST00000481456 CYP19A1P11511 503 aaPredicted RBP12.4□□□□□ -0.42
DDX39B-219ENST00000481456 TNFRSF8P28908 595 aa12.4□□□□□ -0.42
DDX39B-219ENST00000481456 HSPA1LP34931 641 aa12.4□□□□□ -0.42
DDX39B-219ENST00000481456 PBX1P40424 430 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms