RNA–Protein interactions for RNA: ENST00000481260.1

RAPGEF1-207, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 1,034 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-207ENST00000481260 SPIRE1Q08AE8 756 aa12.86□□□□□ -0.35
RAPGEF1-207ENST00000481260 PLA2G4FQ68DD2 849 aa12.86□□□□□ -0.35
RAPGEF1-207ENST00000481260 PPP4R3AQ6IN85 833 aa12.86□□□□□ -0.35
RAPGEF1-207ENST00000481260 TAF2Q6P1X5 1199 aa12.86□□□□□ -0.35
RAPGEF1-207ENST00000481260 RTN4RL1Q86UN2 441 aaPredicted RBP12.86□□□□□ -0.35
RAPGEF1-207ENST00000481260 USP38Q8NB14 1042 aa12.86□□□□□ -0.35
RAPGEF1-207ENST00000481260 C8orf76Q96K31 380 aa12.86□□□□□ -0.35
RAPGEF1-207ENST00000481260 ZSCAN31Q96LW9 406 aaPredicted RBP12.86□□□□□ -0.35
RAPGEF1-207ENST00000481260 LLPHQ9BRT6 129 aaKnown RBP12.86□□□□□ -0.35
RAPGEF1-207ENST00000481260 MTIF3Q9H2K0 278 aaKnown RBP12.86□□□□□ -0.35
RAPGEF1-207ENST00000481260 TMX1Q9H3N1 280 aa12.86□□□□□ -0.35
RAPGEF1-207ENST00000481260 SH2B1Q9NRF2 756 aaPredicted RBP12.86□□□□□ -0.35
RAPGEF1-207ENST00000481260 RGL1Q9NZL6 768 aa12.86□□□□□ -0.35
RAPGEF1-207ENST00000481260 MSRAQ9UJ68 235 aa12.86□□□□□ -0.35
RAPGEF1-207ENST00000481260 GINS2Q9Y248 185 aa12.86□□□□□ -0.35
RAPGEF1-207ENST00000481260 STXBP5LQ9Y2K9 1186 aa12.86□□□□□ -0.35
RAPGEF1-207ENST00000481260 PCDHA11Q9Y5I1 949 aa12.86□□□□□ -0.35
RAPGEF1-207ENST00000481260 ABHD14A-ACY1A0A1B0GW23 586 aa12.85□□□□□ -0.35
RAPGEF1-207ENST00000481260 CAND2O75155 1236 aa12.85□□□□□ -0.35
RAPGEF1-207ENST00000481260 SLC26A2P50443 739 aa12.85□□□□□ -0.35
RAPGEF1-207ENST00000481260 TAP1Q03518 808 aa12.85□□□□□ -0.35
RAPGEF1-207ENST00000481260 IKBKEQ14164 716 aa12.85□□□□□ -0.35
RAPGEF1-207ENST00000481260 RAB30Q15771 203 aa12.85□□□□□ -0.35
RAPGEF1-207ENST00000481260 KIZQ2M2Z5 673 aa12.85□□□□□ -0.35
RAPGEF1-207ENST00000481260 ZNF484Q5JVG2 852 aa12.85□□□□□ -0.35
RAPGEF1-207ENST00000481260 PPP2R2DQ66LE6 453 aa12.85□□□□□ -0.35
RAPGEF1-207ENST00000481260 MYOCDQ8IZQ8 938 aa12.85□□□□□ -0.35
RAPGEF1-207ENST00000481260 METTL13Q8N6R0 699 aa12.85□□□□□ -0.35
RAPGEF1-207ENST00000481260 LINC01465Q8N7H1 131 aa12.85□□□□□ -0.35
RAPGEF1-207ENST00000481260 FBXO18Q8NFZ0 1043 aa12.85□□□□□ -0.35
RAPGEF1-207ENST00000481260 BBXQ8WY36 941 aaPredicted RBP12.85□□□□□ -0.35
RAPGEF1-207ENST00000481260 SEPT8Q92599 483 aa12.85□□□□□ -0.35
RAPGEF1-207ENST00000481260 SLC9A7Q96T83 725 aa12.85□□□□□ -0.35
RAPGEF1-207ENST00000481260 IFIH1Q9BYX4 1025 aaKnown RBP12.85□□□□□ -0.35
RAPGEF1-207ENST00000481260 TCEAL9Q9UHQ7 104 aa12.85□□□□□ -0.35
RAPGEF1-207ENST00000481260 TRPV2Q9Y5S1 764 aa12.85□□□□□ -0.35
RAPGEF1-207ENST00000481260 KAT6AQ92794 2004 aa12.84□□□□□ -0.35
RAPGEF1-207ENST00000481260 SMIM35A0A1B0GVV1 85 aa12.84□□□□□ -0.35
RAPGEF1-207ENST00000481260 TLL1O43897 1013 aa12.84□□□□□ -0.35
RAPGEF1-207ENST00000481260 MGEA5O60502 916 aa12.84□□□□□ -0.35
RAPGEF1-207ENST00000481260 GPR32O75388 356 aa12.84□□□□□ -0.35
RAPGEF1-207ENST00000481260 UPP2O95045 317 aa12.84□□□□□ -0.35
RAPGEF1-207ENST00000481260 GJB5O95377 273 aa12.84□□□□□ -0.35
RAPGEF1-207ENST00000481260 KCNJ6P48051 423 aa12.84□□□□□ -0.35
RAPGEF1-207ENST00000481260 JAK3P52333 1124 aa12.84□□□□□ -0.35
RAPGEF1-207ENST00000481260 NPEPPSP55786 919 aa12.84□□□□□ -0.35
RAPGEF1-207ENST00000481260 PPP2R5CQ13362 524 aa12.84□□□□□ -0.35
RAPGEF1-207ENST00000481260 TRIM29Q14134 588 aa12.84□□□□□ -0.35
RAPGEF1-207ENST00000481260 CTTNQ14247 550 aaKnown RBP12.84□□□□□ -0.35
RAPGEF1-207ENST00000481260 TARBP2Q15633 366 aaKnown RBP12.84□□□□□ -0.35
RAPGEF1-207ENST00000481260 ZNF174Q15697 407 aa12.84□□□□□ -0.35
RAPGEF1-207ENST00000481260 MTERF2Q49AM1 385 aa12.84□□□□□ -0.35
RAPGEF1-207ENST00000481260 NCAPH2Q6IBW4 605 aa12.84□□□□□ -0.35
RAPGEF1-207ENST00000481260 ANO5Q75V66 913 aa12.84□□□□□ -0.35
RAPGEF1-207ENST00000481260 PHOSPHO2Q8TCD6 241 aa12.84□□□□□ -0.35
RAPGEF1-207ENST00000481260 DYDC2Q96IM9 177 aa12.84□□□□□ -0.35
RAPGEF1-207ENST00000481260 MTMR9Q96QG7 549 aa12.84□□□□□ -0.35
RAPGEF1-207ENST00000481260 OSMRQ99650 979 aa12.84□□□□□ -0.35
RAPGEF1-207ENST00000481260 CELF4Q9BZC1 486 aaKnown RBP12.84□□□□□ -0.35
RAPGEF1-207ENST00000481260 BMP2KQ9NSY1 1161 aaPredicted RBP12.84□□□□□ -0.35
RAPGEF1-207ENST00000481260 SEPT9Q9UHD8 586 aaPredicted RBP12.84□□□□□ -0.35
RAPGEF1-207ENST00000481260 MTUS1Q9ULD2 1270 aa12.84□□□□□ -0.35
RAPGEF1-207ENST00000481260 NOC2LQ9Y3T9 749 aaKnown RBP12.84□□□□□ -0.35
RAPGEF1-207ENST00000481260 MICAL3Q7RTP6 2002 aa12.84□□□□□ -0.35
RAPGEF1-207ENST00000481260 WDR81Q562E7 1941 aa12.84□□□□□ -0.35
RAPGEF1-207ENST00000481260 COL4A6Q14031 1691 aa12.83□□□□□ -0.35
RAPGEF1-207ENST00000481260 COL1A2P08123 1366 aa12.83□□□□□ -0.36
RAPGEF1-207ENST00000481260 DDX11L8A8MPP1 907 aa12.83□□□□□ -0.36
RAPGEF1-207ENST00000481260 ENPP3O14638 875 aa12.83□□□□□ -0.36
RAPGEF1-207ENST00000481260 CSDE1O75534 798 aaKnown RBP12.83□□□□□ -0.36
RAPGEF1-207ENST00000481260 PARNO95453 639 aaKnown RBP12.83□□□□□ -0.36
RAPGEF1-207ENST00000481260 FOSL2P15408 326 aa12.83□□□□□ -0.36
RAPGEF1-207ENST00000481260 GCFC2P16383 781 aaKnown RBP12.83□□□□□ -0.36
RAPGEF1-207ENST00000481260 IBSPP21815 317 aaPredicted RBP12.83□□□□□ -0.36
RAPGEF1-207ENST00000481260 FGFR4P22455 802 aa12.83□□□□□ -0.36
RAPGEF1-207ENST00000481260 SFNP31947 248 aa12.83□□□□□ -0.36
RAPGEF1-207ENST00000481260 MCM7P33993 719 aa12.83□□□□□ -0.36
RAPGEF1-207ENST00000481260 GATMP50440 423 aa12.83□□□□□ -0.36
RAPGEF1-207ENST00000481260 TOB1P50616 345 aaPredicted RBP12.83□□□□□ -0.36
RAPGEF1-207ENST00000481260 CYP4A11Q02928 519 aa12.83□□□□□ -0.36
RAPGEF1-207ENST00000481260 EFCAB12Q6NXP0 572 aa12.83□□□□□ -0.36
RAPGEF1-207ENST00000481260 ARNTL2Q8WYA1 636 aa12.83□□□□□ -0.36
RAPGEF1-207ENST00000481260 FAM20AQ96MK3 541 aa12.83□□□□□ -0.36
RAPGEF1-207ENST00000481260 SUGCTQ9HAC7 445 aa12.83□□□□□ -0.36
RAPGEF1-207ENST00000481260 SLC28A3Q9HAS3 691 aa12.83□□□□□ -0.36
RAPGEF1-207ENST00000481260 BRMS1Q9HCU9 246 aa12.83□□□□□ -0.36
RAPGEF1-207ENST00000481260 PRDM6Q9NQX0 595 aa12.83□□□□□ -0.36
RAPGEF1-207ENST00000481260 PADI3Q9ULW8 664 aa12.83□□□□□ -0.36
RAPGEF1-207ENST00000481260 MYO9BQ13459 2157 aa12.83□□□□□ -0.36
RAPGEF1-207ENST00000481260 TMEM265A0A087WTH1 108 aa12.82□□□□□ -0.36
RAPGEF1-207ENST00000481260 POTEMA6NI47 508 aa12.82□□□□□ -0.36
RAPGEF1-207ENST00000481260 ST18O60284 1047 aa12.82□□□□□ -0.36
RAPGEF1-207ENST00000481260 GJB2P29033 226 aa12.82□□□□□ -0.36
RAPGEF1-207ENST00000481260 TXKP42681 527 aa12.82□□□□□ -0.36
RAPGEF1-207ENST00000481260 CALCRLQ16602 461 aa12.82□□□□□ -0.36
RAPGEF1-207ENST00000481260 TSHZ1Q6ZSZ6 1077 aa12.82□□□□□ -0.36
RAPGEF1-207ENST00000481260 RSPH3Q86UC2 560 aa12.82□□□□□ -0.36
RAPGEF1-207ENST00000481260 FAM228AQ86W67 206 aa12.82□□□□□ -0.36
RAPGEF1-207ENST00000481260 KSR1Q8IVT5 923 aa12.82□□□□□ -0.36
RAPGEF1-207ENST00000481260 FAM184AQ8NB25 1140 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms