RNA–Protein interactions for RNA: ENST00000480067.1

CLDN11-205, Transcript of claudin 11, humanhuman

TSL 1 (best)

Gene CLDN11, Length 1,589 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-205ENST00000480067 TMEM119Q4V9L6 283 aa12.49□□□□□ -0.41
CLDN11-205ENST00000480067 XKR9Q5GH70 373 aa12.49□□□□□ -0.41
CLDN11-205ENST00000480067 ZNF484Q5JVG2 852 aa12.49□□□□□ -0.41
CLDN11-205ENST00000480067 PLA2G4FQ68DD2 849 aa12.49□□□□□ -0.41
CLDN11-205ENST00000480067 PPP1R13LQ8WUF5 828 aa12.49□□□□□ -0.41
CLDN11-205ENST00000480067 SH2D3AQ9BRG2 576 aa12.49□□□□□ -0.41
CLDN11-205ENST00000480067 BHMT2Q9H2M3 363 aa12.49□□□□□ -0.41
CLDN11-205ENST00000480067 CYP26B1Q9NR63 512 aa12.49□□□□□ -0.41
CLDN11-205ENST00000480067 SETD4Q9NVD3 440 aa12.49□□□□□ -0.41
CLDN11-205ENST00000480067 HDAC6Q9UBN7 1215 aa12.49□□□□□ -0.41
CLDN11-205ENST00000480067 GRIN2DO15399 1336 aa12.49□□□□□ -0.41
CLDN11-205ENST00000480067 C17orf102A2RUQ5 167 aa12.48□□□□□ -0.41
CLDN11-205ENST00000480067 ARHGEF35A5YM69 484 aa12.48□□□□□ -0.41
CLDN11-205ENST00000480067 E9PMD0 336 aa12.48□□□□□ -0.41
CLDN11-205ENST00000480067 ARVCFO00192 962 aa12.48□□□□□ -0.41
CLDN11-205ENST00000480067 EYA4O95677 639 aa12.48□□□□□ -0.41
CLDN11-205ENST00000480067 SSBP05455 408 aaKnown RBP eCLIP12.48□□□□□ -0.41
CLDN11-205ENST00000480067 SYKP43405 635 aa12.48□□□□□ -0.41
CLDN11-205ENST00000480067 NDUFA8P51970 172 aa12.48□□□□□ -0.41
CLDN11-205ENST00000480067 ATN1P54259 1190 aaPredicted RBP12.48□□□□□ -0.41
CLDN11-205ENST00000480067 NPEPPSP55786 919 aa12.48□□□□□ -0.41
CLDN11-205ENST00000480067 SOX10P56693 466 aa12.48□□□□□ -0.41
CLDN11-205ENST00000480067 GRIK4Q16099 956 aa12.48□□□□□ -0.41
CLDN11-205ENST00000480067 MTERF2Q49AM1 385 aa12.48□□□□□ -0.41
CLDN11-205ENST00000480067 SLC39A5Q6ZMH5 540 aa12.48□□□□□ -0.41
CLDN11-205ENST00000480067 KCNK18Q7Z418 384 aa12.48□□□□□ -0.41
CLDN11-205ENST00000480067 DHX58Q96C10 678 aa12.48□□□□□ -0.41
CLDN11-205ENST00000480067 STK17AQ9UEE5 414 aa12.48□□□□□ -0.41
CLDN11-205ENST00000480067 DBR1Q9UK59 544 aaKnown RBP12.48□□□□□ -0.41
CLDN11-205ENST00000480067 TCHHQ07283 1943 aa12.48□□□□□ -0.41
CLDN11-205ENST00000480067 A0A087X0B3 334 aa12.47□□□□□ -0.41
CLDN11-205ENST00000480067 FAM237AA0A1B0GTK4 181 aa12.47□□□□□ -0.41
CLDN11-205ENST00000480067 PLA2G4BP0C869 781 aa12.47□□□□□ -0.41
CLDN11-205ENST00000480067 RARRES1P49788 294 aa12.47□□□□□ -0.41
CLDN11-205ENST00000480067 PTPN11Q06124 597 aaPredicted RBP12.47□□□□□ -0.41
CLDN11-205ENST00000480067 TBC1D8BQ0IIM8 1120 aa12.47□□□□□ -0.41
CLDN11-205ENST00000480067 DHX8Q14562 1220 aaKnown RBP12.47□□□□□ -0.41
CLDN11-205ENST00000480067 TARBP2Q15633 366 aaKnown RBP12.47□□□□□ -0.41
CLDN11-205ENST00000480067 SESTD1Q86VW0 696 aa12.47□□□□□ -0.41
CLDN11-205ENST00000480067 EXOC8Q8IYI6 725 aa12.47□□□□□ -0.41
CLDN11-205ENST00000480067 SLC43A3Q8NBI5 491 aa12.47□□□□□ -0.41
CLDN11-205ENST00000480067 LMBR1Q8WVP7 490 aa12.47□□□□□ -0.41
CLDN11-205ENST00000480067 SLC7A3Q8WY07 619 aa12.47□□□□□ -0.41
CLDN11-205ENST00000480067 GTF2IRD1Q9UHL9 959 aa12.47□□□□□ -0.41
CLDN11-205ENST00000480067 NOD1Q9Y239 953 aa12.47□□□□□ -0.41
CLDN11-205ENST00000480067 HPSEQ9Y251 543 aa12.47□□□□□ -0.41
CLDN11-205ENST00000480067 PPME1Q9Y570 386 aa12.47□□□□□ -0.41
CLDN11-205ENST00000480067 COL1A2P08123 1366 aa12.47□□□□□ -0.41
CLDN11-205ENST00000480067 ZBTB42B2RXF5 422 aa12.47□□□□□ -0.41
CLDN11-205ENST00000480067 MAGEB2O15479 319 aa12.47□□□□□ -0.41
CLDN11-205ENST00000480067 KLRC1P26715 233 aa12.47□□□□□ -0.41
CLDN11-205ENST00000480067 POLGP54098 1239 aaPredicted RBP12.47□□□□□ -0.41
CLDN11-205ENST00000480067 PTGISQ16647 500 aa12.47□□□□□ -0.41
CLDN11-205ENST00000480067 GDF6Q6KF10 455 aaPredicted RBP12.47□□□□□ -0.41
CLDN11-205ENST00000480067 SV2BQ7L1I2 683 aa12.47□□□□□ -0.41
CLDN11-205ENST00000480067 CEP57L1Q8IYX8 460 aa12.47□□□□□ -0.41
CLDN11-205ENST00000480067 SYT2Q8N9I0 419 aaPredicted RBP12.47□□□□□ -0.41
CLDN11-205ENST00000480067 RETREG2Q8NC44 543 aa12.47□□□□□ -0.41
CLDN11-205ENST00000480067 TRAPPC12Q8WVT3 735 aa12.47□□□□□ -0.41
CLDN11-205ENST00000480067 LARP4BQ92615 738 aaKnown RBP12.47□□□□□ -0.41
CLDN11-205ENST00000480067 RAD54LQ92698 747 aa12.47□□□□□ -0.41
CLDN11-205ENST00000480067 CUEDC2Q9H467 287 aa12.47□□□□□ -0.41
CLDN11-205ENST00000480067 GOLPH3LQ9H4A5 285 aa12.47□□□□□ -0.41
CLDN11-205ENST00000480067 LMBRD1Q9NUN5 540 aa12.47□□□□□ -0.41
CLDN11-205ENST00000480067 TUBE1Q9UJT0 475 aa12.47□□□□□ -0.41
CLDN11-205ENST00000480067 MROH7Q68CQ1 1323 aa12.46□□□□□ -0.41
CLDN11-205ENST00000480067 PQBP1O60828 265 aaKnown RBP12.46□□□□□ -0.42
CLDN11-205ENST00000480067 DGAT1O75907 488 aa12.46□□□□□ -0.42
CLDN11-205ENST00000480067 ZNF202O95125 648 aa12.46□□□□□ -0.42
CLDN11-205ENST00000480067 SLFN14P0C7P3 912 aa12.46□□□□□ -0.42
CLDN11-205ENST00000480067 MCM4P33991 863 aa12.46□□□□□ -0.42
CLDN11-205ENST00000480067 RFC5P40937 340 aa12.46□□□□□ -0.42
CLDN11-205ENST00000480067 CDK7P50613 346 aa12.46□□□□□ -0.42
CLDN11-205ENST00000480067 FAM160A1Q05DH4 1040 aa12.46□□□□□ -0.42
CLDN11-205ENST00000480067 MCM6Q14566 821 aa12.46□□□□□ -0.42
CLDN11-205ENST00000480067 LONRF3Q496Y0 759 aa12.46□□□□□ -0.42
CLDN11-205ENST00000480067 NAALADL2Q58DX5 795 aa12.46□□□□□ -0.42
CLDN11-205ENST00000480067 MARCH8Q5T0T0 291 aa12.46□□□□□ -0.42
CLDN11-205ENST00000480067 PADI6Q6TGC4 694 aa12.46□□□□□ -0.42
CLDN11-205ENST00000480067 MTHFD1LQ6UB35 978 aa12.46□□□□□ -0.42
CLDN11-205ENST00000480067 UBE2Q1Q7Z7E8 422 aa12.46□□□□□ -0.42
CLDN11-205ENST00000480067 METTL13Q8N6R0 699 aa12.46□□□□□ -0.42
CLDN11-205ENST00000480067 JPH2Q9BR39 696 aaPredicted RBP12.46□□□□□ -0.42
CLDN11-205ENST00000480067 SUGCTQ9HAC7 445 aa12.46□□□□□ -0.42
CLDN11-205ENST00000480067 BLOC1S4Q9NUP1 217 aa12.46□□□□□ -0.42
CLDN11-205ENST00000480067 TRMT13Q9NUP7 481 aaKnown RBP12.46□□□□□ -0.42
CLDN11-205ENST00000480067 USP25Q9UHP3 1055 aa12.46□□□□□ -0.42
CLDN11-205ENST00000480067 DCDC2CA8MYV0 355 aa12.45□□□□□ -0.42
CLDN11-205ENST00000480067 TREHO43280 583 aa12.45□□□□□ -0.42
CLDN11-205ENST00000480067 MAFO75444 373 aaPredicted RBP12.45□□□□□ -0.42
CLDN11-205ENST00000480067 TMOD1P28289 359 aa12.45□□□□□ -0.42
CLDN11-205ENST00000480067 HOXC8P31273 242 aa12.45□□□□□ -0.42
CLDN11-205ENST00000480067 DNM2P50570 870 aa12.45□□□□□ -0.42
CLDN11-205ENST00000480067 SLC12A3P55017 1021 aa12.45□□□□□ -0.42
CLDN11-205ENST00000480067 ZNF200P98182 395 aaPredicted RBP12.45□□□□□ -0.42
CLDN11-205ENST00000480067 AMPD3Q01432 767 aa12.45□□□□□ -0.42
CLDN11-205ENST00000480067 HIC1Q14526 733 aa12.45□□□□□ -0.42
CLDN11-205ENST00000480067 E2F4Q16254 413 aa12.45□□□□□ -0.42
CLDN11-205ENST00000480067 C1orf53Q5VUE5 145 aa12.45□□□□□ -0.42
CLDN11-205ENST00000480067 EFCAB12Q6NXP0 572 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms