RNA–Protein interactions for RNA: ENST00000479988.1

CPS1-207, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 1 (best)

Gene CPS1, Length 4,811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-207ENST00000479988 FBXO2Q9UK22 296 aaPredicted RBP6.52□□□□□ -1.37
CPS1-207ENST00000479988 MYO6Q9UM54 1294 aa6.52□□□□□ -1.37
CPS1-207ENST00000479988 PIN4Q9Y237 131 aaKnown RBP6.52□□□□□ -1.37
CPS1-207ENST00000479988 CARNS1A5YM72 827 aa6.52□□□□□ -1.37
CPS1-207ENST00000479988 RIOK3O14730 519 aaKnown RBP6.52□□□□□ -1.37
CPS1-207ENST00000479988 P4HBP07237 508 aaKnown RBP6.52□□□□□ -1.37
CPS1-207ENST00000479988 ANXA13P27216 316 aa6.52□□□□□ -1.37
CPS1-207ENST00000479988 ETF1P62495 437 aaKnown RBP6.52□□□□□ -1.37
CPS1-207ENST00000479988 ATP2C1P98194 919 aaPredicted RBP6.52□□□□□ -1.37
CPS1-207ENST00000479988 SURF1Q15526 300 aa6.52□□□□□ -1.37
CPS1-207ENST00000479988 XKR3Q5GH77 459 aa6.52□□□□□ -1.37
CPS1-207ENST00000479988 TMCO3Q6UWJ1 677 aa6.52□□□□□ -1.37
CPS1-207ENST00000479988 ANKS1AQ92625 1134 aa6.52□□□□□ -1.37
CPS1-207ENST00000479988 ANKRD36BP1Q96IX9 119 aa6.52□□□□□ -1.37
CPS1-207ENST00000479988 LUC7L2Q9Y383 392 aaKnown RBP6.52□□□□□ -1.37
CPS1-207ENST00000479988 NID2Q14112 1375 aa6.52□□□□□ -1.37
CPS1-207ENST00000479988 SHMT1P34896 483 aa6.51□□□□□ -1.37
CPS1-207ENST00000479988 PRPHP41219 470 aa6.51□□□□□ -1.37
CPS1-207ENST00000479988 ALDH7A1P49419 539 aaKnown RBP6.51□□□□□ -1.37
CPS1-207ENST00000479988 LRMPQ12912 555 aa6.51□□□□□ -1.37
CPS1-207ENST00000479988 KIAA1328Q86T90 577 aa6.51□□□□□ -1.37
CPS1-207ENST00000479988 VSTM4Q8IW00 320 aa6.51□□□□□ -1.37
CPS1-207ENST00000479988 DHX40Q8IX18 779 aaKnown RBP6.51□□□□□ -1.37
CPS1-207ENST00000479988 SH3TC2Q8TF17 1288 aa6.51□□□□□ -1.37
CPS1-207ENST00000479988 ZNF296Q8WUU4 475 aaPredicted RBP6.51□□□□□ -1.37
CPS1-207ENST00000479988 GPRASP2Q96D09 838 aa6.51□□□□□ -1.37
CPS1-207ENST00000479988 MTRQ99707 1265 aa6.51□□□□□ -1.37
CPS1-207ENST00000479988 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.51□□□□□ -1.37
CPS1-207ENST00000479988 INCENPQ9NQS7 918 aa6.51□□□□□ -1.37
CPS1-207ENST00000479988 DNAI1Q9UI46 699 aa6.51□□□□□ -1.37
CPS1-207ENST00000479988 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.51□□□□□ -1.37
CPS1-207ENST00000479988 PCDHB12Q9Y5F1 795 aa6.51□□□□□ -1.37
CPS1-207ENST00000479988 STXBP3O00186 592 aa6.51□□□□□ -1.37
CPS1-207ENST00000479988 GPR182O15218 404 aa6.51□□□□□ -1.37
CPS1-207ENST00000479988 GAP43P17677 238 aa6.51□□□□□ -1.37
CPS1-207ENST00000479988 PPIGQ13427 754 aaKnown RBP eCLIP6.51□□□□□ -1.37
CPS1-207ENST00000479988 IKBKEQ14164 716 aa6.51□□□□□ -1.37
CPS1-207ENST00000479988 NUDT18Q6ZVK8 323 aa6.51□□□□□ -1.37
CPS1-207ENST00000479988 CEP57Q86XR8 500 aa6.51□□□□□ -1.37
CPS1-207ENST00000479988 SNX25Q9H3E2 840 aa6.51□□□□□ -1.37
CPS1-207ENST00000479988 RPF1Q9H9Y2 349 aaKnown RBP6.51□□□□□ -1.37
CPS1-207ENST00000479988 TACC3Q9Y6A5 838 aa6.51□□□□□ -1.37
CPS1-207ENST00000479988 CRYBG1Q9Y4K1 1723 aa6.51□□□□□ -1.37
CPS1-207ENST00000479988 ASTN2O75129 1339 aaPredicted RBP6.51□□□□□ -1.37
CPS1-207ENST00000479988 RPTORQ8N122 1335 aa6.51□□□□□ -1.37
CPS1-207ENST00000479988 EFCAB14O75071 495 aa6.51□□□□□ -1.37
CPS1-207ENST00000479988 FGRP09769 529 aa6.51□□□□□ -1.37
CPS1-207ENST00000479988 TGFB3P10600 412 aa6.51□□□□□ -1.37
CPS1-207ENST00000479988 KRT5P13647 590 aa6.51□□□□□ -1.37
CPS1-207ENST00000479988 USP11P51784 963 aa6.51□□□□□ -1.37
CPS1-207ENST00000479988 MYO1EQ12965 1108 aa6.51□□□□□ -1.37
CPS1-207ENST00000479988 PTPROQ16827 1216 aa6.51□□□□□ -1.37
CPS1-207ENST00000479988 TAF2Q6P1X5 1199 aa6.51□□□□□ -1.37
CPS1-207ENST00000479988 RSRC2Q7L4I2 434 aaKnown RBP6.51□□□□□ -1.37
CPS1-207ENST00000479988 SMAP1Q8IYB5 467 aaPredicted RBP6.51□□□□□ -1.37
CPS1-207ENST00000479988 CEP112Q8N8E3 955 aa6.51□□□□□ -1.37
CPS1-207ENST00000479988 DHTKD1Q96HY7 919 aaPredicted RBP6.51□□□□□ -1.37
CPS1-207ENST00000479988 STK17AQ9UEE5 414 aa6.51□□□□□ -1.37
CPS1-207ENST00000479988 NRBP1Q9UHY1 535 aa6.51□□□□□ -1.37
CPS1-207ENST00000479988 LOC102724159A0A0B4J2E5 919 aa6.51□□□□□ -1.37
CPS1-207ENST00000479988 ADCYAP1R1P41586 468 aa6.51□□□□□ -1.37
CPS1-207ENST00000479988 STX17P56962 302 aa6.51□□□□□ -1.37
CPS1-207ENST00000479988 LACTBP83111 547 aaPredicted RBP6.51□□□□□ -1.37
CPS1-207ENST00000479988 PRKCZQ05513 592 aa6.51□□□□□ -1.37
CPS1-207ENST00000479988 IFRD2Q12894 506 aaPredicted RBP6.51□□□□□ -1.37
CPS1-207ENST00000479988 PWP2Q15269 919 aaKnown RBP6.51□□□□□ -1.37
CPS1-207ENST00000479988 ZNF658Q5TYW1 1059 aaPredicted RBP6.51□□□□□ -1.37
CPS1-207ENST00000479988 SLFN12LQ6IEE8 588 aa6.51□□□□□ -1.37
CPS1-207ENST00000479988 CPLX3Q8WVH0 158 aa6.51□□□□□ -1.37
CPS1-207ENST00000479988 BRI3BPQ8WY22 251 aa6.51□□□□□ -1.37
CPS1-207ENST00000479988 KIFAP3Q92845 792 aa6.51□□□□□ -1.37
CPS1-207ENST00000479988 FAM217BQ9NTX9 383 aaPredicted RBP6.51□□□□□ -1.37
CPS1-207ENST00000479988 HAUS2Q9NVX0 235 aa6.51□□□□□ -1.37
CPS1-207ENST00000479988 ZMYND8Q9ULU4 1186 aaPredicted RBP6.51□□□□□ -1.37
CPS1-207ENST00000479988 SLC4A7Q9Y6M7 1214 aa6.51□□□□□ -1.37
CPS1-207ENST00000479988 MACROD2A1Z1Q3 448 aa6.5□□□□□ -1.37
CPS1-207ENST00000479988 RPN1P04843 607 aaKnown RBP6.5□□□□□ -1.37
CPS1-207ENST00000479988 EEF1GP26641 437 aaKnown RBP6.5□□□□□ -1.37
CPS1-207ENST00000479988 CYP26C1Q6V0L0 522 aa6.5□□□□□ -1.37
CPS1-207ENST00000479988 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.5□□□□□ -1.37
CPS1-207ENST00000479988 ZFPM1Q8IX07 1006 aa6.5□□□□□ -1.37
CPS1-207ENST00000479988 AFG1LQ8WV93 481 aa6.5□□□□□ -1.37
CPS1-207ENST00000479988 PAGE5Q96GU1 130 aa6.5□□□□□ -1.37
CPS1-207ENST00000479988 RNPC3Q96LT9 517 aaKnown RBP6.5□□□□□ -1.37
CPS1-207ENST00000479988 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.5□□□□□ -1.37
CPS1-207ENST00000479988 BARHL2Q9NY43 387 aa6.5□□□□□ -1.37
CPS1-207ENST00000479988 TBC1D7Q9P0N9 293 aa6.5□□□□□ -1.37
CPS1-207ENST00000479988 RWDD2AQ9UIY3 292 aa6.5□□□□□ -1.37
CPS1-207ENST00000479988 TCHHQ07283 1943 aa6.5□□□□□ -1.37
CPS1-207ENST00000479988 ASAP2O43150 1006 aa6.5□□□□□ -1.37
CPS1-207ENST00000479988 PGK1P00558 417 aa6.5□□□□□ -1.37
CPS1-207ENST00000479988 SSTR3P32745 418 aaPredicted RBP6.5□□□□□ -1.37
CPS1-207ENST00000479988 SLC26A2P50443 739 aa6.5□□□□□ -1.37
CPS1-207ENST00000479988 TSPY1Q01534 308 aa6.5□□□□□ -1.37
CPS1-207ENST00000479988 MORC3Q14149 939 aa6.5□□□□□ -1.37
CPS1-207ENST00000479988 HSP90B2PQ58FF3 399 aa6.5□□□□□ -1.37
CPS1-207ENST00000479988 GJC2Q5T442 439 aaPredicted RBP6.5□□□□□ -1.37
CPS1-207ENST00000479988 SEZ6LQ9BYH1 1024 aa6.5□□□□□ -1.37
CPS1-207ENST00000479988 CCSER1Q9C0I3 900 aa6.5□□□□□ -1.37
CPS1-207ENST00000479988 C11orf49Q9H6J7 331 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms