RNA–Protein interactions for RNA: ENST00000479501.5

COL20A1-206, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 4,536 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-206ENST00000479501 NEK9Q8TD19 979 aa15.51■□□□□ 0.07
COL20A1-206ENST00000479501 TBC1D31Q96DN5 1066 aa15.51■□□□□ 0.07
COL20A1-206ENST00000479501 FAM114A2Q9NRY5 505 aa15.51■□□□□ 0.07
COL20A1-206ENST00000479501 RGL1Q9NZL6 768 aa15.51■□□□□ 0.07
COL20A1-206ENST00000479501 HDAC6Q9UBN7 1215 aa15.51■□□□□ 0.07
COL20A1-206ENST00000479501 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.51■□□□□ 0.07
COL20A1-206ENST00000479501 GYPCP04921 128 aa15.51■□□□□ 0.07
COL20A1-206ENST00000479501 POLR2BP30876 1174 aaKnown RBP15.51■□□□□ 0.07
COL20A1-206ENST00000479501 MRPS25P82663 173 aaKnown RBP15.51■□□□□ 0.07
COL20A1-206ENST00000479501 SNCBQ16143 134 aa15.51■□□□□ 0.07
COL20A1-206ENST00000479501 EAPPQ56P03 285 aaPredicted RBP15.51■□□□□ 0.07
COL20A1-206ENST00000479501 NYAP1Q6ZVC0 841 aa15.51■□□□□ 0.07
COL20A1-206ENST00000479501 XXYLT1Q8NBI6 393 aa15.51■□□□□ 0.07
COL20A1-206ENST00000479501 PASKQ96RG2 1323 aa15.5■□□□□ 0.07
COL20A1-206ENST00000479501 TBC1D8O95759 1140 aa15.5■□□□□ 0.07
COL20A1-206ENST00000479501 KRT15P19012 456 aa15.5■□□□□ 0.07
COL20A1-206ENST00000479501 HHATQ5VTY9 493 aa15.5■□□□□ 0.07
COL20A1-206ENST00000479501 ANKRD42Q8N9B4 389 aa15.5■□□□□ 0.07
COL20A1-206ENST00000479501 FAM81BQ96LP2 452 aa15.5■□□□□ 0.07
COL20A1-206ENST00000479501 AGPAT5Q9NUQ2 364 aa15.5■□□□□ 0.07
COL20A1-206ENST00000479501 POLLQ9UGP5 575 aa15.5■□□□□ 0.07
COL20A1-206ENST00000479501 WDR64B1ANS9 1081 aa15.5■□□□□ 0.07
COL20A1-206ENST00000479501 ENTPD3O75355 529 aa15.5■□□□□ 0.07
COL20A1-206ENST00000479501 P4HBP07237 508 aaKnown RBP15.5■□□□□ 0.07
COL20A1-206ENST00000479501 MAPK4P31152 587 aa15.5■□□□□ 0.07
COL20A1-206ENST00000479501 JAK3P52333 1124 aa15.5■□□□□ 0.07
COL20A1-206ENST00000479501 GYS2P54840 703 aa15.5■□□□□ 0.07
COL20A1-206ENST00000479501 SPP2Q13103 211 aa15.5■□□□□ 0.07
COL20A1-206ENST00000479501 CCDC89Q8N998 374 aa15.5■□□□□ 0.07
COL20A1-206ENST00000479501 ADPGKQ9BRR6 497 aa15.5■□□□□ 0.07
COL20A1-206ENST00000479501 VCX3BQ9H321 246 aa15.5■□□□□ 0.07
COL20A1-206ENST00000479501 ANKRD65E5RJM6 399 aa15.5■□□□□ 0.07
COL20A1-206ENST00000479501 SEPT6Q14141 434 aa15.5■□□□□ 0.07
COL20A1-206ENST00000479501 LDHDQ86WU2 507 aa15.5■□□□□ 0.07
COL20A1-206ENST00000479501 INO80B-WBP1J3KQ70 363 aa15.49■□□□□ 0.07
COL20A1-206ENST00000479501 EYA4O95677 639 aa15.49■□□□□ 0.07
COL20A1-206ENST00000479501 STX2P32856 288 aa15.49■□□□□ 0.07
COL20A1-206ENST00000479501 QARSP47897 775 aaKnown RBP15.49■□□□□ 0.07
COL20A1-206ENST00000479501 RASSF2P50749 326 aa15.49■□□□□ 0.07
COL20A1-206ENST00000479501 NCAPHQ15003 741 aa15.49■□□□□ 0.07
COL20A1-206ENST00000479501 LLGL1Q15334 1064 aa15.49■□□□□ 0.07
COL20A1-206ENST00000479501 CCDC62Q6P9F0 684 aa15.49■□□□□ 0.07
COL20A1-206ENST00000479501 ARHGAP24Q8N264 748 aa15.49■□□□□ 0.07
COL20A1-206ENST00000479501 INO80BQ9C086 356 aaPredicted RBP15.49■□□□□ 0.07
COL20A1-206ENST00000479501 KLHL14Q9P2G3 628 aa15.49■□□□□ 0.07
COL20A1-206ENST00000479501 COMMD10Q9Y6G5 202 aa15.49■□□□□ 0.07
COL20A1-206ENST00000479501 FAM169AQ9Y6X4 670 aa15.49■□□□□ 0.07
COL20A1-206ENST00000479501 ABCD1P33897 745 aa15.49■□□□□ 0.07
COL20A1-206ENST00000479501 ZNF354CQ86Y25 554 aa15.49■□□□□ 0.07
COL20A1-206ENST00000479501 HADHQ16836 314 aaKnown RBP15.49■□□□□ 0.07
COL20A1-206ENST00000479501 ANKRD20A3Q5VUR7 823 aa15.49■□□□□ 0.07
COL20A1-206ENST00000479501 TRIM68Q6AZZ1 485 aa15.49■□□□□ 0.07
COL20A1-206ENST00000479501 TRIM11Q96F44 468 aa15.49■□□□□ 0.07
COL20A1-206ENST00000479501 JPH2Q9BR39 696 aaPredicted RBP15.49■□□□□ 0.07
COL20A1-206ENST00000479501 LXNQ9BS40 222 aa15.49■□□□□ 0.07
COL20A1-206ENST00000479501 RTFDC1Q9BY42 306 aaPredicted RBP15.49■□□□□ 0.07
COL20A1-206ENST00000479501 K7ERI5 159 aa15.49■□□□□ 0.07
COL20A1-206ENST00000479501 CD44P16070 742 aaKnown RBP15.49■□□□□ 0.07
COL20A1-206ENST00000479501 TMOD1P28289 359 aa15.49■□□□□ 0.07
COL20A1-206ENST00000479501 GCLMP48507 274 aa15.49■□□□□ 0.07
COL20A1-206ENST00000479501 IGBP1P78318 339 aa15.49■□□□□ 0.07
COL20A1-206ENST00000479501 CFAP157Q5JU67 520 aa15.49■□□□□ 0.07
COL20A1-206ENST00000479501 PDXDC1Q6P996 788 aa15.49■□□□□ 0.07
COL20A1-206ENST00000479501 EMBQ6PCB8 327 aa15.49■□□□□ 0.07
COL20A1-206ENST00000479501 EEPD1Q7L9B9 569 aa15.49■□□□□ 0.07
COL20A1-206ENST00000479501 AP1M1Q9BXS5 423 aa15.49■□□□□ 0.07
COL20A1-206ENST00000479501 VPS37BQ9H9H4 285 aa15.49■□□□□ 0.07
COL20A1-206ENST00000479501 PIK3C2AO00443 1686 aa15.48■□□□□ 0.07
COL20A1-206ENST00000479501 ZNF233A6NK53 670 aa15.48■□□□□ 0.07
COL20A1-206ENST00000479501 HSPA6P17066 643 aa15.48■□□□□ 0.07
COL20A1-206ENST00000479501 FXR2P51116 673 aaKnown RBP eCLIP15.48■□□□□ 0.07
COL20A1-206ENST00000479501 PLTPP55058 493 aa15.48■□□□□ 0.07
COL20A1-206ENST00000479501 KRT76Q01546 638 aa15.48■□□□□ 0.07
COL20A1-206ENST00000479501 E2F5Q15329 346 aa15.48■□□□□ 0.07
COL20A1-206ENST00000479501 MAP7D1Q3KQU3 841 aa15.48■□□□□ 0.07
COL20A1-206ENST00000479501 ODF2LQ9ULJ1 636 aa15.48■□□□□ 0.07
COL20A1-206ENST00000479501 ZNF148Q9UQR1 794 aa15.48■□□□□ 0.07
COL20A1-206ENST00000479501 PDXKO00764 312 aa15.48■□□□□ 0.07
COL20A1-206ENST00000479501 TBX3O15119 743 aa15.48■□□□□ 0.07
COL20A1-206ENST00000479501 RPSAP08865 295 aaKnown RBP15.48■□□□□ 0.07
COL20A1-206ENST00000479501 HSPA1LP34931 641 aa15.48■□□□□ 0.07
COL20A1-206ENST00000479501 PSMC4P43686 418 aa15.48■□□□□ 0.07
COL20A1-206ENST00000479501 IRX5P78411 483 aaPredicted RBP15.48■□□□□ 0.07
COL20A1-206ENST00000479501 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.48■□□□□ 0.07
COL20A1-206ENST00000479501 MMS19Q96T76 1030 aa15.48■□□□□ 0.07
COL20A1-206ENST00000479501 RNF146Q9NTX7 359 aa15.48■□□□□ 0.07
COL20A1-206ENST00000479501 PTPN22Q9Y2R2 807 aa15.48■□□□□ 0.07
COL20A1-206ENST00000479501 ZHX2Q9Y6X8 837 aa15.48■□□□□ 0.07
COL20A1-206ENST00000479501 KNDC1Q76NI1 1749 aa15.48■□□□□ 0.07
COL20A1-206ENST00000479501 NPHP3-ACAD11A0A0J9YXS1 232 aa15.48■□□□□ 0.07
COL20A1-206ENST00000479501 NDC80O14777 642 aa15.48■□□□□ 0.07
COL20A1-206ENST00000479501 YARSP54577 528 aaKnown RBP15.48■□□□□ 0.07
COL20A1-206ENST00000479501 EPHA7Q15375 998 aa15.48■□□□□ 0.07
COL20A1-206ENST00000479501 ICE2Q659A1 982 aa15.48■□□□□ 0.07
COL20A1-206ENST00000479501 RHOT2Q8IXI1 618 aa15.48■□□□□ 0.07
COL20A1-206ENST00000479501 RAB3IL1Q8TBN0 382 aa15.48■□□□□ 0.07
COL20A1-206ENST00000479501 OSBPL9Q96SU4 736 aa15.48■□□□□ 0.07
COL20A1-206ENST00000479501 PRR12Q9ULL5 1215 aa15.48■□□□□ 0.07
COL20A1-206ENST00000479501 FRMD3A2A2Y4 597 aa15.47■□□□□ 0.07
COL20A1-206ENST00000479501 ATP1A1P05023 1023 aaKnown RBP15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms