RNA–Protein interactions for RNA: ENST00000479080.1

CHD3-210, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 519 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-210ENST00000479080 NIFKQ9BYG3 293 aaKnown RBP14.62□□□□□ -0.07
CHD3-210ENST00000479080 TRIM9Q9C026 710 aa14.62□□□□□ -0.07
CHD3-210ENST00000479080 AP5M1Q9H0R1 490 aa14.62□□□□□ -0.07
CHD3-210ENST00000479080 TNMDQ9H2S6 317 aa14.62□□□□□ -0.07
CHD3-210ENST00000479080 SMARCAD1Q9H4L7 1026 aa14.62□□□□□ -0.07
CHD3-210ENST00000479080 XPNPEP1Q9NQW7 623 aa14.62□□□□□ -0.07
CHD3-210ENST00000479080 PDLIM7Q9NR12 457 aa14.62□□□□□ -0.07
CHD3-210ENST00000479080 ANKEF1Q9NU02 776 aa14.62□□□□□ -0.07
CHD3-210ENST00000479080 MYL3P08590 195 aa14.61□□□□□ -0.07
CHD3-210ENST00000479080 XRCC6P12956 609 aaKnown RBP eCLIP14.61□□□□□ -0.07
CHD3-210ENST00000479080 SARSP49591 514 aaKnown RBP14.61□□□□□ -0.07
CHD3-210ENST00000479080 MNX1P50219 401 aaPredicted RBP14.61□□□□□ -0.07
CHD3-210ENST00000479080 CPT1AP50416 773 aa14.61□□□□□ -0.07
CHD3-210ENST00000479080 CNNM4Q6P4Q7 775 aa14.61□□□□□ -0.07
CHD3-210ENST00000479080 CKAP2LQ8IYA6 745 aa14.61□□□□□ -0.07
CHD3-210ENST00000479080 CEP57L1Q8IYX8 460 aa14.61□□□□□ -0.07
CHD3-210ENST00000479080 TRAPPC12Q8WVT3 735 aa14.61□□□□□ -0.07
CHD3-210ENST00000479080 GLG1Q92896 1179 aa14.61□□□□□ -0.07
CHD3-210ENST00000479080 C7orf25Q9BPX7 421 aa14.61□□□□□ -0.07
CHD3-210ENST00000479080 FUCA2Q9BTY2 467 aa14.61□□□□□ -0.07
CHD3-210ENST00000479080 AZI2Q9H6S1 392 aa14.61□□□□□ -0.07
CHD3-210ENST00000479080 MAGEF1Q9HAY2 307 aa14.61□□□□□ -0.07
CHD3-210ENST00000479080 POLD4Q9HCU8 107 aa14.61□□□□□ -0.07
CHD3-210ENST00000479080 PRDM10Q9NQV6 1147 aa14.61□□□□□ -0.07
CHD3-210ENST00000479080 SEPT9Q9UHD8 586 aaPredicted RBP14.61□□□□□ -0.07
CHD3-210ENST00000479080 TUBE1Q9UJT0 475 aa14.61□□□□□ -0.07
CHD3-210ENST00000479080 PCDHA5Q9Y5H7 936 aa14.61□□□□□ -0.07
CHD3-210ENST00000479080 RSPH10B2B2RC85 870 aa14.6□□□□□ -0.07
CHD3-210ENST00000479080 H3BRB1 525 aa14.6□□□□□ -0.07
CHD3-210ENST00000479080 RBAK-RBAKDNI3L0D1 243 aa14.6□□□□□ -0.07
CHD3-210ENST00000479080 SSBP05455 408 aaKnown RBP eCLIP14.6□□□□□ -0.07
CHD3-210ENST00000479080 RSPH10BP0C881 870 aa14.6□□□□□ -0.07
CHD3-210ENST00000479080 BMP6P22004 513 aa14.6□□□□□ -0.07
CHD3-210ENST00000479080 PSEN2P49810 448 aa14.6□□□□□ -0.07
CHD3-210ENST00000479080 SOX10P56693 466 aa14.6□□□□□ -0.07
CHD3-210ENST00000479080 EHHADHQ08426 723 aa14.6□□□□□ -0.07
CHD3-210ENST00000479080 GIT2Q14161 759 aa14.6□□□□□ -0.07
CHD3-210ENST00000479080 ZSCAN23Q3MJ62 389 aa14.6□□□□□ -0.07
CHD3-210ENST00000479080 MTERF2Q49AM1 385 aa14.6□□□□□ -0.07
CHD3-210ENST00000479080 XKR9Q5GH70 373 aa14.6□□□□□ -0.07
CHD3-210ENST00000479080 PADI6Q6TGC4 694 aa14.6□□□□□ -0.07
CHD3-210ENST00000479080 SV2BQ7L1I2 683 aa14.6□□□□□ -0.07
CHD3-210ENST00000479080 BBXQ8WY36 941 aaPredicted RBP14.6□□□□□ -0.07
CHD3-210ENST00000479080 DDX12PQ92771 950 aa14.6□□□□□ -0.07
CHD3-210ENST00000479080 TUT1Q9H6E5 874 aaKnown RBP14.6□□□□□ -0.07
CHD3-210ENST00000479080 CYP26B1Q9NR63 512 aa14.6□□□□□ -0.07
CHD3-210ENST00000479080 BMP2KQ9NSY1 1161 aaPredicted RBP14.6□□□□□ -0.07
CHD3-210ENST00000479080 GRIN2DO15399 1336 aa14.6□□□□□ -0.07
CHD3-210ENST00000479080 FRMD3A2A2Y4 597 aa14.59□□□□□ -0.07
CHD3-210ENST00000479080 ARHGEF35A5YM69 484 aa14.59□□□□□ -0.07
CHD3-210ENST00000479080 USO1O60763 962 aaKnown RBP14.59□□□□□ -0.07
CHD3-210ENST00000479080 ASGR1P07306 291 aa14.59□□□□□ -0.07
CHD3-210ENST00000479080 HOXC8P31273 242 aa14.59□□□□□ -0.07
CHD3-210ENST00000479080 SLC26A2P50443 739 aa14.59□□□□□ -0.07
CHD3-210ENST00000479080 RAD51AP2Q09MP3 1159 aa14.59□□□□□ -0.07
CHD3-210ENST00000479080 MKRN4PQ13434 485 aaPredicted RBP14.59□□□□□ -0.07
CHD3-210ENST00000479080 MFSD10Q14728 455 aa14.59□□□□□ -0.07
CHD3-210ENST00000479080 KCNA10Q16322 511 aa14.59□□□□□ -0.07
CHD3-210ENST00000479080 GNASQ5JWF2 1037 aa14.59□□□□□ -0.07
CHD3-210ENST00000479080 MARCH8Q5T0T0 291 aa14.59□□□□□ -0.07
CHD3-210ENST00000479080 NT5DC1Q5TFE4 455 aa14.59□□□□□ -0.07
CHD3-210ENST00000479080 CXCL17Q6UXB2 119 aa14.59□□□□□ -0.07
CHD3-210ENST00000479080 DYMQ7RTS9 669 aa14.59□□□□□ -0.07
CHD3-210ENST00000479080 LINC01465Q8N7H1 131 aa14.59□□□□□ -0.07
CHD3-210ENST00000479080 CEP170P1Q96L14 293 aa14.59□□□□□ -0.07
CHD3-210ENST00000479080 REEP2Q9BRK0 252 aa14.59□□□□□ -0.07
CHD3-210ENST00000479080 FGFBP2Q9BYJ0 223 aa14.59□□□□□ -0.07
CHD3-210ENST00000479080 DHX33Q9H6R0 707 aaKnown RBP14.59□□□□□ -0.07
CHD3-210ENST00000479080 GPRC5CQ9NQ84 441 aa14.59□□□□□ -0.07
CHD3-210ENST00000479080 ERAP1Q9NZ08 941 aa14.59□□□□□ -0.07
CHD3-210ENST00000479080 KIAA1468Q9P260 1216 aa14.59□□□□□ -0.07
CHD3-210ENST00000479080 MAN1B1Q9UKM7 699 aa14.59□□□□□ -0.07
CHD3-210ENST00000479080 SCN10AQ9Y5Y9 1956 aa14.59□□□□□ -0.07
CHD3-210ENST00000479080 IGKV6-21A0A0C4DH24 114 aa14.58□□□□□ -0.08
CHD3-210ENST00000479080 HBP1O60381 514 aa14.58□□□□□ -0.08
CHD3-210ENST00000479080 MSCO60682 206 aa14.58□□□□□ -0.08
CHD3-210ENST00000479080 DKC1O60832 514 aaKnown RBP eCLIP14.58□□□□□ -0.08
CHD3-210ENST00000479080 C22orf31O95567 290 aa14.58□□□□□ -0.08
CHD3-210ENST00000479080 INSRRP14616 1297 aa14.58□□□□□ -0.08
CHD3-210ENST00000479080 GUCY2CP25092 1073 aa14.58□□□□□ -0.08
CHD3-210ENST00000479080 ADAM17P78536 824 aa14.58□□□□□ -0.08
CHD3-210ENST00000479080 DRP2Q13474 957 aa14.58□□□□□ -0.08
CHD3-210ENST00000479080 PKN2Q16513 984 aaKnown RBP14.58□□□□□ -0.08
CHD3-210ENST00000479080 KIAA0753Q2KHM9 967 aa14.58□□□□□ -0.08
CHD3-210ENST00000479080 KANK3Q6NY19 840 aa14.58□□□□□ -0.08
CHD3-210ENST00000479080 BSNDQ8WZ55 320 aa14.58□□□□□ -0.08
CHD3-210ENST00000479080 HPS3Q969F9 1004 aa14.58□□□□□ -0.08
CHD3-210ENST00000479080 FAM167AQ96KS9 214 aa14.58□□□□□ -0.08
CHD3-210ENST00000479080 DEFB118Q96PH6 123 aa14.58□□□□□ -0.08
CHD3-210ENST00000479080 FIZ1Q96SL8 496 aa14.58□□□□□ -0.08
CHD3-210ENST00000479080 MCOLN1Q9GZU1 580 aa14.58□□□□□ -0.08
CHD3-210ENST00000479080 CRISPLD2Q9H0B8 497 aa14.58□□□□□ -0.08
CHD3-210ENST00000479080 RNF208Q9H0X6 261 aa14.58□□□□□ -0.08
CHD3-210ENST00000479080 GZF1Q9H116 711 aaPredicted RBP14.58□□□□□ -0.08
CHD3-210ENST00000479080 OGDHLQ9ULD0 1010 aa14.58□□□□□ -0.08
CHD3-210ENST00000479080 SYCE3A1L190 88 aa14.57□□□□□ -0.08
CHD3-210ENST00000479080 HIP1RO75146 1068 aa14.57□□□□□ -0.08
CHD3-210ENST00000479080 MAFO75444 373 aaPredicted RBP14.57□□□□□ -0.08
CHD3-210ENST00000479080 RPN1P04843 607 aaKnown RBP14.57□□□□□ -0.08
CHD3-210ENST00000479080 SMIM10L2AP0DMW4 78 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms